workflow_manager 0.1.1 → 0.1.2

data/bin/wfm_delete_command

@@ -0,0 +1,19 @@
+#!/usr/bin/env ruby
+# encoding: utf-8
+# 20121112 masa workflow manager client
+Version = '20141030-154828'
+
+require 'drb/drb' 
+require 'workflow_manager/optparse_ex'
+
+opt = OptionParser.new do |o|
+  o.banner = "Usage:\n #{File.basename(__FILE__)} [option]"
+  o.on(:target, nil, '-f file', '--file', 'File/Dir path')
+  o.on(:server, 'druby://localhost:12345', '-d server', '--server', 'workflow manager URI (default: druby://localhost:12345)')
+  o.parse!(ARGV)
+end
+
+uri = opt.server||'druby://localhost:12345'
+
+workflow_manager = DRbObject.new_with_uri(uri)
+puts workflow_manager.delete_command(opt.target)

data/lib/workflow_manager/cluster.rb

@@ -30,6 +30,8 @@ module WorkflowManager
     end
     def kill_command(job_id)
     end
+    def delete_command(target)
+    end
   end
 
   class LocalComputer < Cluster
@@ -74,6 +76,9 @@ module WorkflowManager
     def kill_command(job_id)
       command = "kill #{job_id}"
     end
+    def delete_command(target)
+      command = "rm -rf #{target}"
+    end
   end
 
   class FGCZCluster < Cluster
@@ -119,5 +124,17 @@ module WorkflowManager
     def kill_command(job_id)
       command = "qdel #{job_id}"
     end
+    def delete_command(target)
+      command = "g-req remove #{target}"
+    end
+  end
+
+  class FGCZCourseCluster < FGCZCluster
+    def copy_commands(org_dir, dest_parent_dir)
+      commands = ["cp -r #{org_dir} #{dest_parent_dir}"]
+    end
+    def delete_command(target)
+      command = "rm -rf #{target}"
+    end
   end
 end

data/lib/workflow_manager/server.rb

@@ -114,6 +114,9 @@ module WorkflowManager
       status(job_id, 'fail')
       status = `#{@cluster.kill_command(job_id)}`
     end
+    def delete_command(target)
+      @cluster.delete_command(target)
+    end
     def log_puts(str)
       time = Time.now.strftime("[%Y.%m.%d %H:%M:%S]")
       @mutex.synchronize do

data/lib/workflow_manager/version.rb

@@ -1,3 +1,3 @@
 module WorkflowManager
-  VERSION = "0.1.1"
+  VERSION = "0.1.2"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: workflow_manager
 version: !ruby/object:Gem::Version
-  version: 0.1.1
+  version: 0.1.2
   prerelease: 
 platform: ruby
 authors:
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2014-05-22 00:00:00.000000000 Z
+date: 2014-10-30 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler
@@ -47,6 +47,7 @@ description: Workflow Manager manages job submissions using dRuby.
 email:
 - masaomi.hatakeyama@fgcz.uzh.ch
 executables:
+- wfm_delete_command
 - wfm_get_log
 - wfm_get_script
 - wfm_hello
@@ -63,6 +64,7 @@ files:
 - LICENSE.txt
 - README.md
 - Rakefile
+- bin/wfm_delete_command
 - bin/wfm_get_log
 - bin/wfm_get_script
 - bin/wfm_hello