valkyrie 2.0.0 → 2.1.2
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- checksums.yaml +4 -4
- data/.circleci/config.yml +60 -56
- data/.lando.yml +40 -0
- data/.rubocop.yml +4 -1
- data/.tool-versions +1 -1
- data/Appraisals +4 -4
- data/CHANGELOG.md +136 -0
- data/README.md +21 -49
- data/Rakefile +21 -20
- data/db/config.yml +3 -10
- data/db/schema.rb +0 -40
- data/gemfiles/activerecord_5_2.gemfile +2 -0
- data/gemfiles/{activerecord_5_1.gemfile → activerecord_6_0.gemfile} +3 -1
- data/lib/generators/valkyrie/resource_generator.rb +3 -3
- data/lib/valkyrie.rb +33 -15
- data/lib/valkyrie/change_set.rb +3 -3
- data/lib/valkyrie/id.rb +26 -3
- data/lib/valkyrie/indexers/access_controls_indexer.rb +17 -17
- data/lib/valkyrie/logging.rb +72 -0
- data/lib/valkyrie/persistence/composite_persister.rb +1 -1
- data/lib/valkyrie/persistence/fedora.rb +2 -0
- data/lib/valkyrie/persistence/fedora/list_node.rb +46 -49
- data/lib/valkyrie/persistence/fedora/metadata_adapter.rb +2 -2
- data/lib/valkyrie/persistence/fedora/ordered_list.rb +90 -90
- data/lib/valkyrie/persistence/fedora/ordered_reader.rb +5 -5
- data/lib/valkyrie/persistence/fedora/permissive_schema.rb +3 -3
- data/lib/valkyrie/persistence/fedora/persister.rb +82 -83
- data/lib/valkyrie/persistence/fedora/persister/model_converter.rb +16 -17
- data/lib/valkyrie/persistence/fedora/persister/orm_converter.rb +38 -18
- data/lib/valkyrie/persistence/fedora/query_service.rb +54 -53
- data/lib/valkyrie/persistence/memory/persister.rb +33 -33
- data/lib/valkyrie/persistence/memory/query_service.rb +52 -34
- data/lib/valkyrie/persistence/postgres/orm_converter.rb +52 -52
- data/lib/valkyrie/persistence/postgres/query_service.rb +86 -33
- data/lib/valkyrie/persistence/postgres/resource_converter.rb +1 -1
- data/lib/valkyrie/persistence/shared/json_value_mapper.rb +4 -2
- data/lib/valkyrie/persistence/solr/model_converter.rb +337 -337
- data/lib/valkyrie/persistence/solr/orm_converter.rb +3 -3
- data/lib/valkyrie/persistence/solr/persister.rb +4 -17
- data/lib/valkyrie/persistence/solr/queries/find_all_query.rb +6 -0
- data/lib/valkyrie/persistence/solr/queries/find_members_query.rb +1 -1
- data/lib/valkyrie/persistence/solr/query_service.rb +42 -53
- data/lib/valkyrie/persistence/solr/repository.rb +2 -1
- data/lib/valkyrie/rdf_patches.rb +2 -2
- data/lib/valkyrie/resource.rb +36 -5
- data/lib/valkyrie/specs/shared_specs/change_set.rb +1 -1
- data/lib/valkyrie/specs/shared_specs/persister.rb +17 -6
- data/lib/valkyrie/specs/shared_specs/queries.rb +112 -9
- data/lib/valkyrie/storage/fedora.rb +17 -17
- data/lib/valkyrie/storage_adapter.rb +16 -13
- data/lib/valkyrie/types.rb +3 -1
- data/lib/valkyrie/version.rb +1 -1
- data/solr/config/solrconfig.xml +0 -10
- data/tasks/dev.rake +14 -51
- data/valkyrie.gemspec +4 -4
- metadata +40 -37
- data/.docker-stack/valkyrie-development/docker-compose.yml +0 -53
- data/.docker-stack/valkyrie-test/docker-compose.yml +0 -53
- data/db/seeds.rb +0 -8
- data/tasks/docker.rake +0 -31
@@ -7,7 +7,7 @@ module Valkyrie::Storage
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7
7
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SLASH = '/'
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8
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9
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# @param [Ldp::Client] connection
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10
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-
def initialize(connection:, base_path: "/", fedora_version:
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10
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+
def initialize(connection:, base_path: "/", fedora_version: Valkyrie::Persistence::Fedora::DEFAULT_FEDORA_VERSION)
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@connection = connection
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@base_path = base_path
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@fedora_version = fedora_version
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@@ -83,24 +83,24 @@ module Valkyrie::Storage
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private
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-
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-
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-
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-
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-
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+
# @return [IOProxy]
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+
def response(id:)
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+
response = connection.http.get(fedora_identifier(id: id))
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+
raise Valkyrie::StorageAdapter::FileNotFound unless response.success?
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+
IOProxy.new(response.body)
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+
end
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-
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-
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-
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-
end
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+
def default_resource_uri_transformer
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lambda do |resource, base_url|
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+
id = CGI.escape(resource.id.to_s)
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+
RDF::URI.new(base_url + id)
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end
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+
end
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-
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-
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-
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-
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-
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+
def base_url
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+
pre_divider = base_path.starts_with?(SLASH) ? '' : SLASH
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+
post_divider = base_path.ends_with?(SLASH) ? '' : SLASH
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+
"#{connection.http.url_prefix}#{pre_divider}#{base_path}#{post_divider}"
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+
end
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end
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end
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@@ -5,6 +5,7 @@ module Valkyrie
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# storage backends (such as fedora, disk, etc)
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class StorageAdapter
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class FileNotFound < StandardError; end
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+
class AdapterNotFoundError < StandardError; end
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class_attribute :storage_adapters
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self.storage_adapters = {}
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class << self
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@@ -54,10 +55,12 @@ module Valkyrie
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# @param id [Valkyrie::ID]
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# @return [Valkyrie::StorageAdapter]
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def adapter_for(id:)
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-
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-
storage_adapters.values.find do |storage_adapter|
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+
handler = storage_adapters.values.find do |storage_adapter|
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storage_adapter.handles?(id: id)
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end
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+
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+
raise AdapterNotFoundError, 'Unable to find a StorageAdapter' if handler.nil?
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handler
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end
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end
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@@ -103,20 +106,20 @@ module Valkyrie
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private
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-
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-
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-
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+
def tmp_file_name
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id.to_s.tr(':/', '__')
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+
end
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112
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-
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-
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-
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+
def tmp_file_path
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+
::File.join(Dir.tmpdir, tmp_file_name)
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+
end
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-
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-
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-
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-
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-
end
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+
def tmp_file
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+
@tmp_file ||= ::File.open(tmp_file_path, 'w+b') do |f|
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+
IO.copy_stream(io, f)
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f
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end
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+
end
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end
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end
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end
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data/lib/valkyrie/types.rb
CHANGED
@@ -84,7 +84,7 @@ module Valkyrie
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84
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Set = Array.constructor do |value|
|
85
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value = Array[value]
|
86
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clean_values = value.reject do |val|
|
87
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-
|
87
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+
(val.is_a?(Valkyrie::ID) && val.to_s == '') || val == ''
|
88
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end.reject(&:nil?).uniq
|
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clean_values.map do |val|
|
@@ -99,6 +99,8 @@ module Valkyrie
|
|
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end
|
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Array.singleton_class.include(ArrayDefault)
|
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Set.singleton_class.include(ArrayDefault)
|
102
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+
Relation = Valkyrie::Types::Set.of(Valkyrie::Types::ID)
|
103
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+
OrderedRelation = Valkyrie::Types::Array.of(Valkyrie::Types::ID).meta(ordered: true)
|
102
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103
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# Used for when an input may be an array, but the output needs to be a
|
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# single string.
|
data/lib/valkyrie/version.rb
CHANGED
data/solr/config/solrconfig.xml
CHANGED
@@ -284,16 +284,6 @@
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284
284
|
-->
|
285
285
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</searchComponent>
|
286
286
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|
287
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-
<searchComponent name="suggest" class="solr.SuggestComponent">
|
288
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-
<lst name="suggester">
|
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-
<str name="name">mySuggester</str>
|
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-
<str name="lookupImpl">FuzzyLookupFactory</str>
|
291
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-
<str name="suggestAnalyzerFieldType">textSuggest</str>
|
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<str name="buildOnCommit">true</str>
|
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-
<str name="field">suggest</str>
|
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-
</lst>
|
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-
</searchComponent>
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-
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<requestHandler name="/suggest" class="solr.SearchHandler" startup="lazy">
|
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<lst name="defaults">
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<str name="suggest">true</str>
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data/tasks/dev.rake
CHANGED
@@ -2,63 +2,26 @@
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2
2
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3
3
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namespace :server do
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desc "Start solr and fedora servers for testing"
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task :
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+
task :start do
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require 'rails'
|
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-
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-
|
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-
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-
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-
FcrepoWrapper.wrap(shared_fedora_opts.merge(port: 8988, fcrepo_home_dir: "tmp/fcrepo4-test-data", version: "4.7.5", instance_directory: "tmp/fcrepo4")) do |_fcrepo|
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12
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-
FcrepoWrapper::Instance.new(shared_fedora_opts.merge(port: 8998, fcrepo_home_dir: "tmp/fcrepo5-test-data", version: "5.0.0", instance_directory: "tmp/fcrepo5")).wrap do |_other_repo|
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13
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-
puts "Setup solr & Fedora"
|
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-
loop do
|
15
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-
sleep(1)
|
16
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-
end
|
17
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-
end
|
18
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-
end
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19
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-
end
|
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-
end
|
7
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+
`lando start`
|
8
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`bundle exec rake db:create`
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+
`bundle exec rake db:migrate`
|
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+
puts "Started Solr/Fedora/Postgres"
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11
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end
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22
12
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23
13
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desc "Cleanup test servers"
|
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task :
|
14
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+
task :clean do
|
25
15
|
require 'rails'
|
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-
|
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-
|
28
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-
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-
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-
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-
puts "Cleaned up test solr & fedora servers."
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+
`lando destroy -y`
|
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`lando start`
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+
`bundle exec rake db:create`
|
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+
`bundle exec rake db:migrate`
|
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+
puts "Cleaned/Started Solr/Fedora/Postgres"
|
32
21
|
end
|
33
22
|
|
34
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-
desc "
|
35
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-
task :
|
36
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-
|
37
|
-
require 'solr_wrapper'
|
38
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-
require 'fcrepo_wrapper'
|
39
|
-
|
40
|
-
SolrWrapper.wrap(shared_solr_opts.merge(port: 8983, instance_dir: 'tmp/blacklight-core')) do |solr|
|
41
|
-
solr.with_collection(name: "blacklight-core", dir: Pathname.new(__dir__).join("..", "solr", "config").to_s) do
|
42
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-
FcrepoWrapper.wrap(shared_fedora_opts.merge(port: 8986, fcrepo_home_dir: "tmp/fcrepo4-dev-data", version: "4.7.5")) do |_fcrepo|
|
43
|
-
FcrepoWrapper::Instance.new(shared_fedora_opts.merge(port: 8996, fcrepo_home_dir: "tmp/fcrepo5-dev-data", version: "5.0.0")).wrap do |_fcrepo|
|
44
|
-
puts "Setup solr & Fedora"
|
45
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-
loop do
|
46
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-
sleep(1)
|
47
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-
end
|
48
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-
end
|
49
|
-
end
|
50
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-
end
|
51
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-
end
|
52
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-
end
|
53
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-
|
54
|
-
def shared_solr_opts
|
55
|
-
opts = { managed: true, verbose: true, persist: false, download_dir: "tmp" }
|
56
|
-
opts[:version] = ENV['SOLR_VERSION'] if ENV['SOLR_VERSION']
|
57
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-
opts
|
58
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-
end
|
59
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-
|
60
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-
def shared_fedora_opts
|
61
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-
opts = { managed: true, verbose: true, enable_jms: false, download_dir: "tmp" }
|
62
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-
opts
|
23
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+
desc "Stop test servers"
|
24
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+
task :stop do
|
25
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+
`lando stop -y`
|
63
26
|
end
|
64
27
|
end
|
data/valkyrie.gemspec
CHANGED
@@ -24,18 +24,19 @@ Gem::Specification.new do |spec|
|
|
24
24
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spec.add_dependency 'draper'
|
25
25
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spec.add_dependency 'activemodel'
|
26
26
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spec.add_dependency 'dry-types', '~> 1.0'
|
27
|
-
spec.add_dependency 'rdf'
|
27
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+
spec.add_dependency 'rdf', '~> 3.0', '>= 3.0.10'
|
28
28
|
spec.add_dependency 'activesupport'
|
29
29
|
spec.add_dependency 'railties' # To use generators and engines
|
30
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-
spec.add_dependency 'reform'
|
30
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+
spec.add_dependency 'reform', '~> 2.2'
|
31
31
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spec.add_dependency 'reform-rails'
|
32
32
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spec.add_dependency 'json-ld'
|
33
33
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spec.add_dependency 'json'
|
34
34
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spec.add_dependency 'rdf-vocab'
|
35
35
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spec.add_dependency 'disposable', '~> 0.4.5'
|
36
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+
spec.add_dependency 'faraday', '< 1.0'
|
36
37
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|
37
38
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spec.add_development_dependency "bundler", "> 1.16.0", "< 3"
|
38
|
-
spec.add_development_dependency "rake", "
|
39
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+
spec.add_development_dependency "rake", ">= 10"
|
39
40
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spec.add_development_dependency "rspec", "~> 3.0"
|
40
41
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spec.add_development_dependency "pry"
|
41
42
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spec.add_development_dependency "webmock"
|
@@ -46,7 +47,6 @@ Gem::Specification.new do |spec|
|
|
46
47
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spec.add_development_dependency 'yard'
|
47
48
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spec.add_development_dependency 'solr_wrapper'
|
48
49
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spec.add_development_dependency 'fcrepo_wrapper'
|
49
|
-
spec.add_development_dependency 'docker-stack', '~> 0.2.6'
|
50
50
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spec.add_development_dependency 'timecop'
|
51
51
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spec.add_development_dependency 'appraisal'
|
52
52
|
end
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: valkyrie
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 2.
|
4
|
+
version: 2.1.2
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Trey Pendragon
|
8
|
-
autorequire:
|
8
|
+
autorequire:
|
9
9
|
bindir: exe
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2021-04-19 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: dry-struct
|
@@ -70,16 +70,22 @@ dependencies:
|
|
70
70
|
name: rdf
|
71
71
|
requirement: !ruby/object:Gem::Requirement
|
72
72
|
requirements:
|
73
|
+
- - "~>"
|
74
|
+
- !ruby/object:Gem::Version
|
75
|
+
version: '3.0'
|
73
76
|
- - ">="
|
74
77
|
- !ruby/object:Gem::Version
|
75
|
-
version:
|
78
|
+
version: 3.0.10
|
76
79
|
type: :runtime
|
77
80
|
prerelease: false
|
78
81
|
version_requirements: !ruby/object:Gem::Requirement
|
79
82
|
requirements:
|
83
|
+
- - "~>"
|
84
|
+
- !ruby/object:Gem::Version
|
85
|
+
version: '3.0'
|
80
86
|
- - ">="
|
81
87
|
- !ruby/object:Gem::Version
|
82
|
-
version:
|
88
|
+
version: 3.0.10
|
83
89
|
- !ruby/object:Gem::Dependency
|
84
90
|
name: activesupport
|
85
91
|
requirement: !ruby/object:Gem::Requirement
|
@@ -112,16 +118,16 @@ dependencies:
|
|
112
118
|
name: reform
|
113
119
|
requirement: !ruby/object:Gem::Requirement
|
114
120
|
requirements:
|
115
|
-
- - "
|
121
|
+
- - "~>"
|
116
122
|
- !ruby/object:Gem::Version
|
117
|
-
version: '
|
123
|
+
version: '2.2'
|
118
124
|
type: :runtime
|
119
125
|
prerelease: false
|
120
126
|
version_requirements: !ruby/object:Gem::Requirement
|
121
127
|
requirements:
|
122
|
-
- - "
|
128
|
+
- - "~>"
|
123
129
|
- !ruby/object:Gem::Version
|
124
|
-
version: '
|
130
|
+
version: '2.2'
|
125
131
|
- !ruby/object:Gem::Dependency
|
126
132
|
name: reform-rails
|
127
133
|
requirement: !ruby/object:Gem::Requirement
|
@@ -192,6 +198,20 @@ dependencies:
|
|
192
198
|
- - "~>"
|
193
199
|
- !ruby/object:Gem::Version
|
194
200
|
version: 0.4.5
|
201
|
+
- !ruby/object:Gem::Dependency
|
202
|
+
name: faraday
|
203
|
+
requirement: !ruby/object:Gem::Requirement
|
204
|
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requirements:
|
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|
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- - "<"
|
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- !ruby/object:Gem::Version
|
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|
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version: '1.0'
|
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|
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type: :runtime
|
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|
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prerelease: false
|
210
|
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version_requirements: !ruby/object:Gem::Requirement
|
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|
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requirements:
|
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|
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- - "<"
|
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|
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- !ruby/object:Gem::Version
|
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|
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version: '1.0'
|
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|
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|
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|
name: bundler
|
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requirement: !ruby/object:Gem::Requirement
|
@@ -216,16 +236,16 @@ dependencies:
|
|
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236
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name: rake
|
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237
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requirement: !ruby/object:Gem::Requirement
|
218
238
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requirements:
|
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|
-
- - "
|
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|
+
- - ">="
|
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240
|
- !ruby/object:Gem::Version
|
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|
-
version: '10
|
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|
+
version: '10'
|
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242
|
type: :development
|
223
243
|
prerelease: false
|
224
244
|
version_requirements: !ruby/object:Gem::Requirement
|
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|
requirements:
|
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|
-
- - "
|
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|
+
- - ">="
|
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|
- !ruby/object:Gem::Version
|
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|
-
version: '10
|
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|
+
version: '10'
|
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|
- !ruby/object:Gem::Dependency
|
230
250
|
name: rspec
|
231
251
|
requirement: !ruby/object:Gem::Requirement
|
@@ -366,20 +386,6 @@ dependencies:
|
|
366
386
|
- - ">="
|
367
387
|
- !ruby/object:Gem::Version
|
368
388
|
version: '0'
|
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|
-
- !ruby/object:Gem::Dependency
|
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|
-
name: docker-stack
|
371
|
-
requirement: !ruby/object:Gem::Requirement
|
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|
-
requirements:
|
373
|
-
- - "~>"
|
374
|
-
- !ruby/object:Gem::Version
|
375
|
-
version: 0.2.6
|
376
|
-
type: :development
|
377
|
-
prerelease: false
|
378
|
-
version_requirements: !ruby/object:Gem::Requirement
|
379
|
-
requirements:
|
380
|
-
- - "~>"
|
381
|
-
- !ruby/object:Gem::Version
|
382
|
-
version: 0.2.6
|
383
389
|
- !ruby/object:Gem::Dependency
|
384
390
|
name: timecop
|
385
391
|
requirement: !ruby/object:Gem::Requirement
|
@@ -408,7 +414,7 @@ dependencies:
|
|
408
414
|
- - ">="
|
409
415
|
- !ruby/object:Gem::Version
|
410
416
|
version: '0'
|
411
|
-
description:
|
417
|
+
description:
|
412
418
|
email:
|
413
419
|
- tpendragon@princeton.edu
|
414
420
|
executables: []
|
@@ -417,9 +423,8 @@ extra_rdoc_files: []
|
|
417
423
|
files:
|
418
424
|
- ".circleci/config.yml"
|
419
425
|
- ".ctags"
|
420
|
-
- ".docker-stack/valkyrie-development/docker-compose.yml"
|
421
|
-
- ".docker-stack/valkyrie-test/docker-compose.yml"
|
422
426
|
- ".gitignore"
|
427
|
+
- ".lando.yml"
|
423
428
|
- ".rspec"
|
424
429
|
- ".rubocop.yml"
|
425
430
|
- ".rubocop_todo.yml"
|
@@ -449,9 +454,8 @@ files:
|
|
449
454
|
- db/migrate/20180212092225_create_updated_at_index.rb
|
450
455
|
- db/migrate/20180802220739_add_optimistic_locking_to_orm_resources.rb
|
451
456
|
- db/schema.rb
|
452
|
-
- db/seeds.rb
|
453
|
-
- gemfiles/activerecord_5_1.gemfile
|
454
457
|
- gemfiles/activerecord_5_2.gemfile
|
458
|
+
- gemfiles/activerecord_6_0.gemfile
|
455
459
|
- lib/config/database_connection.rb
|
456
460
|
- lib/generators/valkyrie/resource_generator.rb
|
457
461
|
- lib/generators/valkyrie/templates/resource.rb.erb
|
@@ -462,6 +466,7 @@ files:
|
|
462
466
|
- lib/valkyrie/engine.rb
|
463
467
|
- lib/valkyrie/id.rb
|
464
468
|
- lib/valkyrie/indexers/access_controls_indexer.rb
|
469
|
+
- lib/valkyrie/logging.rb
|
465
470
|
- lib/valkyrie/metadata_adapter.rb
|
466
471
|
- lib/valkyrie/persistence.rb
|
467
472
|
- lib/valkyrie/persistence/buffered_persister.rb
|
@@ -555,13 +560,12 @@ files:
|
|
555
560
|
- solr/config/xslt/luke.xsl
|
556
561
|
- solr/solr.xml
|
557
562
|
- tasks/dev.rake
|
558
|
-
- tasks/docker.rake
|
559
563
|
- valkyrie.gemspec
|
560
564
|
- valkyrie_logo.png
|
561
565
|
homepage: https://github.com/samvera/valkyrie
|
562
566
|
licenses: []
|
563
567
|
metadata: {}
|
564
|
-
post_install_message:
|
568
|
+
post_install_message:
|
565
569
|
rdoc_options: []
|
566
570
|
require_paths:
|
567
571
|
- lib
|
@@ -576,9 +580,8 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
576
580
|
- !ruby/object:Gem::Version
|
577
581
|
version: '0'
|
578
582
|
requirements: []
|
579
|
-
|
580
|
-
|
581
|
-
signing_key:
|
583
|
+
rubygems_version: 3.0.3
|
584
|
+
signing_key:
|
582
585
|
specification_version: 4
|
583
586
|
summary: An ORM using the Data Mapper pattern, specifically built to solve Digital
|
584
587
|
Repository use cases.
|
@@ -1,53 +0,0 @@
|
|
1
|
-
---
|
2
|
-
version: '3.4'
|
3
|
-
volumes:
|
4
|
-
fedora4:
|
5
|
-
fedora5:
|
6
|
-
db:
|
7
|
-
solr_repo:
|
8
|
-
solr_index:
|
9
|
-
services:
|
10
|
-
fedora4:
|
11
|
-
image: nulib/fcrepo4:4.7.5
|
12
|
-
volumes:
|
13
|
-
- fedora4:/data
|
14
|
-
ports:
|
15
|
-
- 8986:8080
|
16
|
-
fedora5:
|
17
|
-
image: nulib/fcrepo4:5.0.0
|
18
|
-
volumes:
|
19
|
-
- fedora5:/data
|
20
|
-
ports:
|
21
|
-
- 8996:8080
|
22
|
-
db:
|
23
|
-
image: healthcheck/postgres:alpine
|
24
|
-
volumes:
|
25
|
-
- db:/data
|
26
|
-
environment:
|
27
|
-
- PGDATA=/data
|
28
|
-
- POSTGRES_USER=docker
|
29
|
-
- POSTGRES_PASSWORD=d0ck3r
|
30
|
-
ports:
|
31
|
-
- 5433:5432
|
32
|
-
solr_repo:
|
33
|
-
image: solr:7.2-alpine
|
34
|
-
ports:
|
35
|
-
- 8983:8983
|
36
|
-
volumes:
|
37
|
-
- solr_repo:/opt/solr/server/solr/mycores
|
38
|
-
- "../../solr:/solr_config"
|
39
|
-
entrypoint:
|
40
|
-
- docker-entrypoint.sh
|
41
|
-
- solr-precreate
|
42
|
-
- blacklight-core
|
43
|
-
- "/solr_config/config"
|
44
|
-
healthcheck:
|
45
|
-
test:
|
46
|
-
- CMD
|
47
|
-
- wget
|
48
|
-
- "-O"
|
49
|
-
- "/dev/null"
|
50
|
-
- http://localhost:8983/solr/
|
51
|
-
interval: 30s
|
52
|
-
timeout: 5s
|
53
|
-
retries: 3
|