valkyrie 0.0.0 → 0.1.0
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- checksums.yaml +4 -4
- data/.gitignore +1 -3
- data/.rubocop.yml +28 -0
- data/Gemfile +6 -1
- data/README.md +145 -10
- data/Rakefile +59 -1
- data/bin/console +1 -1
- data/config/valkyrie.yml +8 -0
- data/db/config.yml +17 -0
- data/db/migrate/20160111215816_enable_uuid_extension.rb +6 -0
- data/db/migrate/20161007101725_create_orm_resources.rb +10 -0
- data/db/migrate/20170124135846_add_model_type_to_orm_resources.rb +6 -0
- data/db/migrate/20170531004548_change_model_type_to_internal_model.rb +6 -0
- data/db/schema.rb +65 -0
- data/db/seeds.rb +8 -0
- data/lib/config/database_connection.rb +15 -0
- data/lib/generators/valkyrie/resource_generator.rb +27 -0
- data/lib/generators/valkyrie/templates/resource.rb.erb +9 -0
- data/lib/generators/valkyrie/templates/resource_spec.rb.erb +13 -0
- data/lib/valkyrie.rb +76 -1
- data/lib/valkyrie/adapter_container.rb +12 -0
- data/lib/valkyrie/change_set.rb +84 -0
- data/lib/valkyrie/decorators/decorator_list.rb +15 -0
- data/lib/valkyrie/decorators/decorator_with_arguments.rb +14 -0
- data/lib/valkyrie/derivative_service.rb +42 -0
- data/lib/valkyrie/engine.rb +10 -0
- data/lib/valkyrie/file_characterization_service.rb +42 -0
- data/lib/valkyrie/id.rb +32 -0
- data/lib/valkyrie/indexers/access_controls_indexer.rb +19 -0
- data/lib/valkyrie/local_file_service.rb +11 -0
- data/lib/valkyrie/metadata_adapter.rb +22 -0
- data/lib/valkyrie/persist_derivatives.rb +29 -0
- data/lib/valkyrie/persistence.rb +14 -0
- data/lib/valkyrie/persistence/buffered_persister.rb +28 -0
- data/lib/valkyrie/persistence/composite_persister.rb +29 -0
- data/lib/valkyrie/persistence/delete_tracking_buffer.rb +21 -0
- data/lib/valkyrie/persistence/fedora.rb +11 -0
- data/lib/valkyrie/persistence/fedora/list_node.rb +88 -0
- data/lib/valkyrie/persistence/fedora/metadata_adapter.rb +45 -0
- data/lib/valkyrie/persistence/fedora/ordered_list.rb +146 -0
- data/lib/valkyrie/persistence/fedora/ordered_reader.rb +28 -0
- data/lib/valkyrie/persistence/fedora/persister.rb +47 -0
- data/lib/valkyrie/persistence/fedora/persister/model_converter.rb +199 -0
- data/lib/valkyrie/persistence/fedora/persister/orm_converter.rb +338 -0
- data/lib/valkyrie/persistence/fedora/persister/resource_factory.rb +21 -0
- data/lib/valkyrie/persistence/fedora/query_service.rb +80 -0
- data/lib/valkyrie/persistence/memory.rb +8 -0
- data/lib/valkyrie/persistence/memory/metadata_adapter.rb +22 -0
- data/lib/valkyrie/persistence/memory/persister.rb +58 -0
- data/lib/valkyrie/persistence/memory/query_service.rb +86 -0
- data/lib/valkyrie/persistence/postgres.rb +6 -0
- data/lib/valkyrie/persistence/postgres/metadata_adapter.rb +20 -0
- data/lib/valkyrie/persistence/postgres/orm.rb +9 -0
- data/lib/valkyrie/persistence/postgres/orm/resource.rb +7 -0
- data/lib/valkyrie/persistence/postgres/orm_converter.rb +118 -0
- data/lib/valkyrie/persistence/postgres/persister.rb +33 -0
- data/lib/valkyrie/persistence/postgres/queries.rb +8 -0
- data/lib/valkyrie/persistence/postgres/queries/find_inverse_references_query.rb +31 -0
- data/lib/valkyrie/persistence/postgres/queries/find_members_query.rb +33 -0
- data/lib/valkyrie/persistence/postgres/queries/find_references_query.rb +33 -0
- data/lib/valkyrie/persistence/postgres/query_service.rb +53 -0
- data/lib/valkyrie/persistence/postgres/resource_converter.rb +18 -0
- data/lib/valkyrie/persistence/postgres/resource_factory.rb +30 -0
- data/lib/valkyrie/persistence/solr.rb +6 -0
- data/lib/valkyrie/persistence/solr/metadata_adapter.rb +42 -0
- data/lib/valkyrie/persistence/solr/model_converter.rb +270 -0
- data/lib/valkyrie/persistence/solr/orm_converter.rb +252 -0
- data/lib/valkyrie/persistence/solr/persister.rb +32 -0
- data/lib/valkyrie/persistence/solr/queries.rb +11 -0
- data/lib/valkyrie/persistence/solr/queries/default_paginator.rb +16 -0
- data/lib/valkyrie/persistence/solr/queries/find_all_query.rb +33 -0
- data/lib/valkyrie/persistence/solr/queries/find_by_id_query.rb +24 -0
- data/lib/valkyrie/persistence/solr/queries/find_inverse_references_query.rb +30 -0
- data/lib/valkyrie/persistence/solr/queries/find_members_query.rb +43 -0
- data/lib/valkyrie/persistence/solr/queries/find_references_query.rb +34 -0
- data/lib/valkyrie/persistence/solr/query_service.rb +48 -0
- data/lib/valkyrie/persistence/solr/repository.rb +36 -0
- data/lib/valkyrie/persistence/solr/resource_factory.rb +24 -0
- data/lib/valkyrie/rdf_patches.rb +17 -0
- data/lib/valkyrie/resource.rb +106 -0
- data/lib/valkyrie/resource/access_controls.rb +13 -0
- data/lib/valkyrie/specs/shared_specs.rb +10 -0
- data/lib/valkyrie/specs/shared_specs/change_set_persister.rb +60 -0
- data/lib/valkyrie/specs/shared_specs/derivative_service.rb +30 -0
- data/lib/valkyrie/specs/shared_specs/file.rb +12 -0
- data/lib/valkyrie/specs/shared_specs/file_characterization_service.rb +33 -0
- data/lib/valkyrie/specs/shared_specs/metadata_adapter.rb +10 -0
- data/lib/valkyrie/specs/shared_specs/persister.rb +154 -0
- data/lib/valkyrie/specs/shared_specs/queries.rb +128 -0
- data/lib/valkyrie/specs/shared_specs/resource.rb +71 -0
- data/lib/valkyrie/specs/shared_specs/storage_adapter.rb +44 -0
- data/lib/valkyrie/storage.rb +8 -0
- data/lib/valkyrie/storage/disk.rb +55 -0
- data/lib/valkyrie/storage/fedora.rb +71 -0
- data/lib/valkyrie/storage/memory.rb +31 -0
- data/lib/valkyrie/storage_adapter.rb +100 -0
- data/lib/valkyrie/types.rb +34 -0
- data/lib/valkyrie/value_mapper.rb +67 -0
- data/lib/valkyrie/version.rb +2 -1
- data/lib/valkyrie/vocab/pcdm_use.rb +73 -0
- data/valkyrie.gemspec +33 -7
- metadata +462 -7
- data/.travis.yml +0 -5
checksums.yaml
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---
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SHA1:
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metadata.gz:
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metadata.gz: a5895a08d879fc01c20f546804cb147bb6287f4e
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data.tar.gz: a7934d10ee04ed79c752159001f883aa15a32149
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SHA512:
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metadata.gz:
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metadata.gz: b8e7471ae686bd39aa04dc7e225dffa1348a06716faa4f824f9a11dd50df5e8e55cc8fd6a49fece559391b31840f62395090fa29f8a2a618b648152b1c840d02
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data.tar.gz: da1d0422841bb1f24b902f839c95d754ade7b26b4767b22a22c4f33db9ed84090aab0c53b9d2cab88741d5741ad791a453db52a86cad671c727d454d92d51680
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data/.gitignore
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data/.rubocop.yml
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inherit_gem:
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bixby: bixby_default.yml
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AllCops:
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DisplayCopNames: true
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TargetRubyVersion: 2.3
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Exclude:
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- 'bin/*'
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- 'db/schema.rb'
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- 'vendor/**/*'
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RSpec/ScatteredSetup:
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Enabled: false
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Metrics/BlockLength:
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Exclude:
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- 'spec/**/*'
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- 'lib/valkyrie/specs/**/*'
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- 'db/schema.rb'
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- 'Rakefile'
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- '*.gemspec'
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RSpec/ExampleLength:
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Enabled: false
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RSpec/MultipleExpectations:
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Enabled: false
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Rails/TimeZone:
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Enabled: false
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Style/PredicateName:
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Exclude:
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- "lib/valkyrie/resource.rb"
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- "lib/valkyrie/persistence/solr/queries/default_paginator.rb"
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data/Gemfile
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# frozen_string_literal: true
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source 'https://rubygems.org'
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# Specify your gem's dependencies in valkyrie.gemspec
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gemspec
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# Necessary for the --ignore-parent-exclusion feature. Remove when
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# https://github.com/bbatsov/rubocop/pull/4329 is merged.
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gem 'rubocop', github: 'nelsonjr/rubocop', ref: 'a5db18a49b9f318644ae7209c73452fb7bbcdc49'
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data/README.md
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# Valkyrie
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Valkyrie is a gem for enabling multiple backends for storage of files and metadata in Samvera,
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currently developed in a subdirectory of the [proof-of-concept app of the same name](..).
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[![CircleCI](https://circleci.com/gh/samvera-labs/valkyrie.svg?style=svg)](https://circleci.com/gh/samvera-labs/valkyrie)
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[![Coverage Status](https://coveralls.io/repos/github/samvera-labs/valkyrie/badge.svg?branch=master)](https://coveralls.io/github/samvera-labs/valkyrie?branch=master)
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[![Stories in Ready](https://badge.waffle.io/samvera-labs/valkyrie.png?label=ready&title=Ready)](https://waffle.io/samvera-labs/valkyrie)
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TODO: Delete this and the text above, and describe your gem
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## Installation
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Add this line to your application's Gemfile:
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```ruby
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gem 'valkyrie'
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gem 'valkyrie', github: 'samvera-labs/valkyrie'
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```
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And then execute:
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$ bundle
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Or install it yourself as:
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## Configuration
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Valkyrie is configured in two places: an initializer that registers the persistence options and a YAML
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configuration file that sets which options are used by default in which environments.
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### Sample initializer: `config/initializers/valkyrie.rb`:
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Here is a sample initializer that registers a couple adapters and storage adapters, in each case linking an
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instance with a short name that can be used to refer to it in your application:
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```
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# frozen_string_literal: true
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require 'valkyrie'
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Rails.application.config.to_prepare do
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Valkyrie::MetadataAdapter.register(
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Valkyrie::Persistence::Postgres::MetadataAdapter,
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:postgres
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)
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Valkyrie::MetadataAdapter.register(
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Valkyrie::Persistence::Memory::MetadataAdapter.new,
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:memory
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)
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Valkyrie::StorageAdapter.register(
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Valkyrie::Storage::Disk.new(base_path: Rails.root.join("tmp", "files")),
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:disk
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)
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Valkyrie::StorageAdapter.register(
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Valkyrie::Storage::Fedora.new(connection: ActiveFedora.fedora.connection),
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:fedora
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)
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Valkyrie::StorageAdapter.register(
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Valkyrie::Storage::Memory.new,
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:memory
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)
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end
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```
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The initializer registers two `Valkyrie::MetadataAdapter` instances for storing metadata:
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* `:postgres` which stores metadata in a PostgreSQL database
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* `:memory` which stores metadata in an in-memory cache (this cache is not persistent, so it is only
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appropriate for testing)
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Other adapter options include `Valkyrie::Persistence::BufferedPersister` for buffering in memory before bulk
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updating another persister, `Valkyrie::Persistence::CompositePersister` for storing in more than one adapter
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at once, and `Valkyrie::Persistence::Solr` for storing in Solr.
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The initializer also registers three `Valkyrie::StorageAdapter` instances for storing files:
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* `:disk` which stores files on disk
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* `:fedora` which stores files in Fedora
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* `:memory` which stores files in an in-memory cache (again, not persistent, so this is only appropriate for
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testing)
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### Sample configuration: `config/valkyrie.yml`:
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A sample configuration file that configures your application to use different adapters:
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```
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development:
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adapter: postgres
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storage_adapter: disk
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test:
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adapter: memory
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storage_adapter: memory
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production:
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adapter: postgres
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storage_adapter: fedora
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```
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For each environment, you must set two values:
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* `adapter` is the store where Valkyrie will put the metadata
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* `storage_adapter` is the store where Valkyrie will put the files
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The values are the short names used in your initializer.
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## Usage
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### Define a Custom Work
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Define a custom work class:
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```
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# frozen_string_literal: true
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class MyModel < Valkyrie::Resource
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include Valkyrie::Resource::AccessControls
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attribute :id, Valkyrie::Types::ID.optional # Optional to allow auto-generation of IDs
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attribute :title, Valkyrie::Types::Set # Sets are unordered
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attribute :authors, Valkyrie::Types::Array # Arrays are ordered
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end
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```
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#### Work Types Generator
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To create a custom Valkyrie model in your application, you can use the Rails generator. For example, to
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generate a model named `FooBar` with an unordered `title` field and an ordered `member_ids` field:
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```
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rails generate valkyrie:model FooBar title member_ids:array
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```
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You can namespace your model class by including a slash in the model name:
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```
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rails generate valkyrie:model Foo/Bar title member_ids:array
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```
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### Read and Write Data
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```
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# create an object
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object1 = MyModel.new title: 'My Cool Object', authors: ['Jones, Alice', 'Smith, Bob']
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object1 = Persister.save(model: object1)
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# load an object from the database
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object2 = QueryService.find_by(id: object1.id)
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# load all objects
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objects = QueryService.find_all
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# load all MyModel objects
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Valkyrie.config.metadata_adapter.query_service.find_all_of_model(model: MyModel)
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```
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## Installing a Development environment
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See the parent app README for [instructions on setting up a development
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environment](../#installing-a-development-environment). To run the test suite:
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1. Start Solr and Fedora servers for testing with `rake server:test` in the parent app
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1. Run the gem's RSpec test suite with `cd valkyrie && rspec spec`
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##
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## License
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Valkyrie is available under [the Apache 2.0 license](../LICENSE).
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To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
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## Contributing
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Bug reports and pull requests are welcome on GitHub at https://github.com/
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Bug reports and pull requests are welcome on GitHub at https://github.com/samvera-labs/valkyrie/.
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data/Rakefile
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# frozen_string_literal: true
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require "bundler/gem_tasks"
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require "rspec/core/rake_task"
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require 'yaml'
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require 'config/database_connection'
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require 'active_record'
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RSpec::Core::RakeTask.new(:spec)
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task :
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task default: :spec
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namespace :db do
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task :environment do
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path = File.join(File.dirname(__FILE__), './db/migrate')
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migrations_paths = [path]
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DATABASE_ENV = ENV['RACK_ENV'] || 'test'
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MIGRATIONS_DIR = ENV['MIGRATIONS_DIR'] || migrations_paths
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end
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task configuration: :environment do
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@config = YAML.safe_load(ERB.new(File.read("db/config.yml")).result)[DATABASE_ENV]
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end
|
22
|
+
|
23
|
+
task configure_connection: :configuration do
|
24
|
+
DatabaseConnection.connect!(DATABASE_ENV)
|
25
|
+
ActiveRecord::Base.logger = Logger.new STDOUT if @config['logger']
|
26
|
+
end
|
27
|
+
|
28
|
+
desc 'Create the database from db/config.yml for the current DATABASE_ENV'
|
29
|
+
task create: :configure_connection do
|
30
|
+
database = ActiveRecord::Tasks::PostgreSQLDatabaseTasks.new(@config)
|
31
|
+
database.create
|
32
|
+
puts "Database created"
|
33
|
+
end
|
34
|
+
|
35
|
+
desc 'Drops the database for the current DATABASE_ENV'
|
36
|
+
task drop: :configure_connection do
|
37
|
+
database = ActiveRecord::Tasks::PostgreSQLDatabaseTasks.new(@config)
|
38
|
+
database.drop
|
39
|
+
puts "Database dropped"
|
40
|
+
end
|
41
|
+
|
42
|
+
desc 'Migrate the database (options: VERSION=x, VERBOSE=false).'
|
43
|
+
task migrate: :configure_connection do
|
44
|
+
begin
|
45
|
+
verbose = ENV["VERBOSE"] ? ENV["VERBOSE"] == "true" : true
|
46
|
+
version = ENV["VERSION"] ? ENV["VERSION"].to_i : nil
|
47
|
+
scope = ENV['SCOPE']
|
48
|
+
verbose_was = ActiveRecord::Migration.verbose
|
49
|
+
ActiveRecord::Migration.verbose = verbose
|
50
|
+
ActiveRecord::Migrator.migrate(MIGRATIONS_DIR, version) do |migration|
|
51
|
+
scope.blank? || scope == migration.scope
|
52
|
+
end
|
53
|
+
ActiveRecord::Base.clear_cache!
|
54
|
+
ensure
|
55
|
+
ActiveRecord::Migration.verbose = verbose_was
|
56
|
+
end
|
57
|
+
end
|
58
|
+
|
59
|
+
desc 'Rolls the schema back to the previous version (specify steps w/ STEP=n).'
|
60
|
+
task rollback: :configure_connection do
|
61
|
+
step = ENV['STEP'] ? ENV['STEP'].to_i : 1
|
62
|
+
ActiveRecord::Migrator.rollback(MIGRATIONS_DIR, step)
|
63
|
+
end
|
64
|
+
end
|
data/bin/console
CHANGED
data/config/valkyrie.yml
ADDED
data/db/config.yml
ADDED
@@ -0,0 +1,17 @@
|
|
1
|
+
development: &default
|
2
|
+
adapter: postgresql
|
3
|
+
database: Valkyrie_gem_development
|
4
|
+
encoding: utf8
|
5
|
+
min_messages: warning
|
6
|
+
pool: <%= Integer(ENV.fetch("DB_POOL", 5)) %>
|
7
|
+
reaping_frequency: <%= Integer(ENV.fetch("DB_REAPING_FREQUENCY", 10)) %>
|
8
|
+
timeout: 5000
|
9
|
+
|
10
|
+
test:
|
11
|
+
adapter: postgresql
|
12
|
+
encoding: utf8
|
13
|
+
min_messages: warning
|
14
|
+
pool: <%= Integer(ENV.fetch("DB_POOL", 5)) %>
|
15
|
+
reaping_frequency: <%= Integer(ENV.fetch("DB_REAPING_FREQUENCY", 10)) %>
|
16
|
+
timeout: 5000
|
17
|
+
database: Valkyrie_gem_test
|
@@ -0,0 +1,10 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
class CreateOrmResources < ActiveRecord::Migration[5.0]
|
3
|
+
def change
|
4
|
+
create_table :orm_resources, id: :uuid do |t|
|
5
|
+
t.jsonb :metadata, null: false, default: {}
|
6
|
+
t.timestamps
|
7
|
+
end
|
8
|
+
add_index :orm_resources, :metadata, using: :gin
|
9
|
+
end
|
10
|
+
end
|
data/db/schema.rb
ADDED
@@ -0,0 +1,65 @@
|
|
1
|
+
# This file is auto-generated from the current state of the database. Instead
|
2
|
+
# of editing this file, please use the migrations feature of Active Record to
|
3
|
+
# incrementally modify your database, and then regenerate this schema definition.
|
4
|
+
#
|
5
|
+
# Note that this schema.rb definition is the authoritative source for your
|
6
|
+
# database schema. If you need to create the application database on another
|
7
|
+
# system, you should be using db:schema:load, not running all the migrations
|
8
|
+
# from scratch. The latter is a flawed and unsustainable approach (the more migrations
|
9
|
+
# you'll amass, the slower it'll run and the greater likelihood for issues).
|
10
|
+
#
|
11
|
+
# It's strongly recommended that you check this file into your version control system.
|
12
|
+
|
13
|
+
ActiveRecord::Schema.define(version: 20170531004548) do
|
14
|
+
# These are extensions that must be enabled in order to support this database
|
15
|
+
enable_extension "plpgsql"
|
16
|
+
enable_extension "uuid-ossp"
|
17
|
+
|
18
|
+
create_table "bookmarks", id: :serial, force: :cascade do |t|
|
19
|
+
t.integer "user_id", null: false
|
20
|
+
t.string "user_type"
|
21
|
+
t.string "document_id"
|
22
|
+
t.string "document_type"
|
23
|
+
t.binary "title"
|
24
|
+
t.datetime "created_at", null: false
|
25
|
+
t.datetime "updated_at", null: false
|
26
|
+
t.index ["document_id"], name: "index_bookmarks_on_document_id"
|
27
|
+
t.index ["user_id"], name: "index_bookmarks_on_user_id"
|
28
|
+
end
|
29
|
+
|
30
|
+
create_table "orm_resources", id: :uuid, default: -> { "uuid_generate_v4()" }, force: :cascade do |t|
|
31
|
+
t.jsonb "metadata", default: {}, null: false
|
32
|
+
t.datetime "created_at", null: false
|
33
|
+
t.datetime "updated_at", null: false
|
34
|
+
t.string "internal_resource"
|
35
|
+
t.index ["metadata"], name: "index_orm_resources_on_metadata", using: :gin
|
36
|
+
end
|
37
|
+
|
38
|
+
create_table "searches", id: :serial, force: :cascade do |t|
|
39
|
+
t.binary "query_params"
|
40
|
+
t.integer "user_id"
|
41
|
+
t.string "user_type"
|
42
|
+
t.datetime "created_at", null: false
|
43
|
+
t.datetime "updated_at", null: false
|
44
|
+
t.index ["user_id"], name: "index_searches_on_user_id"
|
45
|
+
end
|
46
|
+
|
47
|
+
create_table "users", id: :serial, force: :cascade do |t|
|
48
|
+
t.string "email", default: "", null: false
|
49
|
+
t.string "encrypted_password", default: "", null: false
|
50
|
+
t.string "reset_password_token"
|
51
|
+
t.datetime "reset_password_sent_at"
|
52
|
+
t.datetime "remember_created_at"
|
53
|
+
t.integer "sign_in_count", default: 0, null: false
|
54
|
+
t.datetime "current_sign_in_at"
|
55
|
+
t.datetime "last_sign_in_at"
|
56
|
+
t.inet "current_sign_in_ip"
|
57
|
+
t.inet "last_sign_in_ip"
|
58
|
+
t.datetime "created_at", null: false
|
59
|
+
t.datetime "updated_at", null: false
|
60
|
+
t.boolean "guest", default: false
|
61
|
+
t.index ["email"], name: "index_users_on_email", unique: true
|
62
|
+
t.index ["reset_password_token"], name: "index_users_on_reset_password_token", unique: true
|
63
|
+
end
|
64
|
+
|
65
|
+
end
|