us_core_test_kit 0.7.2 → 0.8.0

data/lib/us_core_test_kit/generated/v7.0.0-ballot/treatment_intervention_preference/treatment_intervention_preference_provenance_revinclude_search_test.rb

@@ -1,53 +0,0 @@
-require_relative '../../../search_test'
-require_relative '../../../generator/group_metadata'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class TreatmentInterventionPreferenceProvenanceRevincludeSearchTest < Inferno::Test
-      include USCoreTestKit::SearchTest
-
-      title 'Server returns Provenance resources from Observation search by patient + code + revInclude:Provenance:target'
-      description %(
-        A server SHALL be capable of supporting _revIncludes:Provenance:target.
-
-        This test will perform a search by patient + code + revInclude:Provenance:target and
-        will pass if a Provenance resource is found in the response.
-      %)
-
-      id :us_core_v700_ballot_treatment_intervention_preference_provenance_revinclude_search_test
-  
-      input :patient_ids,
-        title: 'Patient IDs',
-        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
-  
-      def properties
-        @properties ||= SearchTestProperties.new(
-          fixed_value_search: true,
-        resource_type: 'Observation',
-        search_param_names: ['patient', 'code'],
-        possible_status_search: true
-        )
-      end
-
-      def self.metadata
-        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
-      end
-
-      def self.provenance_metadata
-        @provenance_metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, '..', 'provenance', 'metadata.yml'), aliases: true))
-      end
-
-      def scratch_resources
-        scratch[:treatment_intervention_preference_resources] ||= {}
-      end
-
-      def scratch_provenance_resources
-        scratch[:provenance_resources] ||= {}
-      end
-
-      run do
-        run_provenance_revinclude_search_test
-      end
-    end
-  end
-end

data/lib/us_core_test_kit/generated/v7.0.0-ballot/treatment_intervention_preference/treatment_intervention_preference_read_test.rb

@@ -1,26 +0,0 @@
-require_relative '../../../read_test'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class TreatmentInterventionPreferenceReadTest < Inferno::Test
-      include USCoreTestKit::ReadTest
-
-      title 'Server returns correct Observation resource from Observation read interaction'
-      description 'A server SHALL support the Observation read interaction.'
-
-      id :us_core_v700_ballot_treatment_intervention_preference_read_test
-
-      def resource_type
-        'Observation'
-      end
-
-      def scratch_resources
-        scratch[:treatment_intervention_preference_resources] ||= {}
-      end
-
-      run do
-        perform_read_test(all_scratch_resources)
-      end
-    end
-  end
-end

data/lib/us_core_test_kit/generated/v7.0.0-ballot/treatment_intervention_preference/treatment_intervention_preference_reference_resolution_test.rb

@@ -1,40 +0,0 @@
-require_relative '../../../reference_resolution_test'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class TreatmentInterventionPreferenceReferenceResolutionTest < Inferno::Test
-      include USCoreTestKit::ReferenceResolutionTest
-
-      title 'MustSupport references within Observation resources are valid'
-      description %(
-        This test will attempt to read external references provided within elements
-        marked as 'MustSupport', if any are available.
-
-        It verifies that at least one external reference for each MustSupport Reference element
-        can be accessed by the test client, and conforms to corresponding US Core profile.
-
-        Elements which may provide external references include:
-
-        * Observation.subject
-      )
-
-      id :us_core_v700_ballot_treatment_intervention_preference_reference_resolution_test
-
-      def resource_type
-        'Observation'
-      end
-
-      def self.metadata
-        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true))
-      end
-
-      def scratch_resources
-        scratch[:treatment_intervention_preference_resources] ||= {}
-      end
-
-      run do
-        perform_reference_resolution_test(scratch_resources[:all])
-      end
-    end
-  end
-end

data/lib/us_core_test_kit/generated/v7.0.0-ballot/treatment_intervention_preference/treatment_intervention_preference_validation_test.rb

@@ -1,40 +0,0 @@
-require_relative '../../../validation_test'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class TreatmentInterventionPreferenceValidationTest < Inferno::Test
-      include USCoreTestKit::ValidationTest
-
-      id :us_core_v700_ballot_treatment_intervention_preference_validation_test
-      title 'Observation resources returned during previous tests conform to the US Core Treatment Intervention Preference Profile'
-      description %(
-This test verifies resources returned from the first search conform to
-the [US Core Treatment Intervention Preference Profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-treatment-intervention-preference).
-Systems must demonstrate at least one valid example in order to pass this test.
-
-It verifies the presence of mandatory elements and that elements with
-required bindings contain appropriate values. CodeableConcept element
-bindings will fail if none of their codings have a code/system belonging
-to the bound ValueSet. Quantity, Coding, and code element bindings will
-fail if their code/system are not found in the valueset.
-
-      )
-      output :dar_code_found, :dar_extension_found
-
-      def resource_type
-        'Observation'
-      end
-
-      def scratch_resources
-        scratch[:treatment_intervention_preference_resources] ||= {}
-      end
-
-      run do
-        perform_validation_test(scratch_resources[:all] || [],
-                                'http://hl7.org/fhir/us/core/StructureDefinition/us-core-treatment-intervention-preference',
-                                '7.0.0-ballot',
-                                skip_if_empty: true)
-      end
-    end
-  end
-end

data/lib/us_core_test_kit/generated/v7.0.0-ballot/treatment_intervention_preference_group.rb

@@ -1,96 +0,0 @@
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_patient_code_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_patient_category_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_patient_category_date_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_patient_category_status_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_patient_code_date_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_read_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_provenance_revinclude_search_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_validation_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_must_support_test'
-require_relative 'treatment_intervention_preference/treatment_intervention_preference_reference_resolution_test'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class TreatmentInterventionPreferenceGroup < Inferno::TestGroup
-      title 'Observation Treatment Intervention Preference Tests'
-      short_description 'Verify support for the server capabilities required by the US Core Treatment Intervention Preference Profile.'
-      description %(
-  # Background
-
-The US Core Observation Treatment Intervention Preference sequence verifies that the system under test is
-able to provide correct responses for Observation queries. These queries
-must contain resources conforming to the US Core Treatment Intervention Preference Profile as
-specified in the US Core v7.0.0-ballot Implementation Guide.
-
-# Testing Methodology
-## Searching
-This test sequence will first perform each required search associated
-with this resource. This sequence will perform searches with the
-following parameters:
-
-* patient + code
-* patient + category
-* patient + category + date
-
-### Search Parameters
-The first search uses the selected patient(s) from the prior launch
-sequence. Any subsequent searches will look for its parameter values
-from the results of the first search. For example, the `identifier`
-search in the patient sequence is performed by looking for an existing
-`Patient.identifier` from any of the resources returned in the `_id`
-search. If a value cannot be found this way, the search is skipped.
-
-### Search Validation
-Inferno will retrieve up to the first 20 bundle pages of the reply for
-Observation resources and save them for subsequent tests. Each of
-these resources is then checked to see if it matches the searched
-parameters in accordance with [FHIR search
-guidelines](https://www.hl7.org/fhir/search.html). The test will fail,
-for example, if a Patient search for `gender=male` returns a `female`
-patient.
-
-
-## Must Support
-Each profile contains elements marked as "must support". This test
-sequence expects to see each of these elements at least once. If at
-least one cannot be found, the test will fail. The test will look
-through the Observation resources found in the first test for these
-elements.
-
-## Profile Validation
-Each resource returned from the first search is expected to conform to
-the [US Core Treatment Intervention Preference Profile](http://hl7.org/fhir/us/core/StructureDefinition/us-core-treatment-intervention-preference). Each element is checked against
-teminology binding and cardinality requirements.
-
-Elements with a required binding are validated against their bound
-ValueSet. If the code/system in the element is not part of the ValueSet,
-then the test will fail.
-
-## Reference Validation
-At least one instance of each external reference in elements marked as
-"must support" within the resources provided by the system must resolve.
-The test will attempt to read each reference found and will fail if no
-read succeeds.
-
-      )
-
-      id :us_core_v700_ballot_treatment_intervention_preference
-      run_as_group
-
-      def self.metadata
-        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'treatment_intervention_preference', 'metadata.yml'), aliases: true))
-      end
-  
-      test from: :us_core_v700_ballot_treatment_intervention_preference_patient_code_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_patient_category_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_patient_category_date_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_patient_category_status_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_patient_code_date_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_read_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_provenance_revinclude_search_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_validation_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_must_support_test
-      test from: :us_core_v700_ballot_treatment_intervention_preference_reference_resolution_test
-    end
-  end
-end

data/lib/us_core_test_kit/generated/v7.0.0-ballot/us_core_test_suite.rb

@@ -1,220 +0,0 @@
-require 'inferno/dsl/oauth_credentials'
-require_relative '../../version'
-require_relative '../../custom_groups/v7.0.0-ballot/capability_statement_group'
-require_relative '../../custom_groups/v4.0.0/clinical_notes_guidance_group'
-require_relative '../../custom_groups/data_absent_reason_group'
-require_relative '../../custom_groups/smart_app_launch_group'
-require_relative '../../custom_groups/v7.0.0-ballot/smart_granular_scopes_group'
-require_relative '../../custom_groups/v7.0.0-ballot/screening_assessment_group'
-require_relative '../../provenance_validator'
-require_relative '../../us_core_options'
-
-require_relative 'patient_group'
-require_relative 'allergy_intolerance_group'
-require_relative 'care_plan_group'
-require_relative 'care_team_group'
-require_relative 'condition_encounter_diagnosis_group'
-require_relative 'condition_problems_health_concerns_group'
-require_relative 'coverage_group'
-require_relative 'device_group'
-require_relative 'diagnostic_report_note_group'
-require_relative 'diagnostic_report_lab_group'
-require_relative 'document_reference_group'
-require_relative 'encounter_group'
-require_relative 'goal_group'
-require_relative 'immunization_group'
-require_relative 'medication_dispense_group'
-require_relative 'medication_request_group'
-require_relative 'observation_lab_group'
-require_relative 'observation_pregnancystatus_group'
-require_relative 'observation_pregnancyintent_group'
-require_relative 'observation_occupation_group'
-require_relative 'respiratory_rate_group'
-require_relative 'simple_observation_group'
-require_relative 'treatment_intervention_preference_group'
-require_relative 'care_experience_preference_group'
-require_relative 'heart_rate_group'
-require_relative 'body_temperature_group'
-require_relative 'pediatric_weight_for_height_group'
-require_relative 'pulse_oximetry_group'
-require_relative 'smokingstatus_group'
-require_relative 'observation_sexual_orientation_group'
-require_relative 'head_circumference_group'
-require_relative 'body_height_group'
-require_relative 'bmi_group'
-require_relative 'observation_screening_assessment_group'
-require_relative 'average_blood_pressure_group'
-require_relative 'blood_pressure_group'
-require_relative 'observation_clinical_result_group'
-require_relative 'pediatric_bmi_for_age_group'
-require_relative 'head_circumference_percentile_group'
-require_relative 'body_weight_group'
-require_relative 'procedure_group'
-require_relative 'questionnaire_response_group'
-require_relative 'service_request_group'
-require_relative 'location_group'
-require_relative 'organization_group'
-require_relative 'practitioner_group'
-require_relative 'practitioner_role_group'
-require_relative 'provenance_group'
-require_relative 'related_person_group'
-require_relative 'specimen_group'
-
-module USCoreTestKit
-  module USCoreV700_BALLOT
-    class USCoreTestSuite < Inferno::TestSuite
-      title 'US Core v7.0.0-ballot'
-      description %(
-        The US Core Test Kit tests systems for their conformance to the [US Core
-        Implementation Guide]().
-
-        HL7® FHIR® resources are validated with the Java validator using
-        `tx.fhir.org` as the terminology server. Users should note that the
-        although the ONC Certification (g)(10) Standardized API Test Suite
-        includes tests from this suite, [it uses a different method to perform
-        terminology
-        validation](https://github.com/onc-healthit/onc-certification-g10-test-kit/wiki/FAQ#q-why-do-some-resources-fail-in-us-core-test-kit-with-terminology-validation-errors).
-        As a result, resource validation results may not be consistent between
-        the US Core Test Suite and the ONC Certification (g)(10) Standardized
-        API Test Suite.
-      )
-      version VERSION
-
-      VALIDATION_MESSAGE_FILTERS = [
-        %r{Sub-extension url 'introspect' is not defined by the Extension http://fhir-registry\.smarthealthit\.org/StructureDefinition/oauth-uris},
-        %r{Sub-extension url 'revoke' is not defined by the Extension http://fhir-registry\.smarthealthit\.org/StructureDefinition/oauth-uris},
-        /Observation\.effective\.ofType\(Period\): .*vs-1:/, # Invalid invariant in FHIR v4.0.1
-        /Observation\.effective\.ofType\(Period\): .*us-core-1:/, # Invalid invariant in US Core v3.1.1
-        /Provenance.agent\[\d*\]: Rule provenance-1/, #Invalid invariant in US Core v5.0.1
-        %r{Unknown Code System 'http://hl7.org/fhir/us/core/CodeSystem/us-core-tags'}, # Validator has an issue with this US Core 5 code system in US Core 6 resource
-        %r{URL value 'http://hl7.org/fhir/us/core/CodeSystem/us-core-tags' does not resolve}, # Validator has an issue with this US Core 5 code system in US Core 6 resource
-        /\A\S+: \S+: URL value '.*' does not resolve/,
-        %r{Observation.component\[\d+\].value.ofType\(Quantity\): The code provided \(http://unitsofmeasure.org#L/min\) was not found in the value set 'Vital Signs Units'} # Known issue with the Pulse Oximetry Profile
-      ].freeze
-
-      VERSION_SPECIFIC_MESSAGE_FILTERS = [].freeze
-
-      def self.metadata
-        @metadata ||= YAML.load_file(File.join(__dir__, 'metadata.yml'), aliases: true)[:groups].map do |raw_metadata|
-            Generator::GroupMetadata.new(raw_metadata)
-          end
-      end
-
-      id :us_core_v700_ballot
-
-      fhir_resource_validator do
-        igs 'hl7.fhir.us.core#7.0.0-ballot'
-        message_filters = VALIDATION_MESSAGE_FILTERS + VERSION_SPECIFIC_MESSAGE_FILTERS
-
-        exclude_message do |message|
-
-          message_filters.any? { |filter| filter.match? message.message }
-        end
-
-        perform_additional_validation do |resource, profile_url|
-          ProvenanceValidator.validate(resource) if resource.instance_of?(FHIR::Provenance)
-        end
-      end
-
-      input :url,
-        title: 'FHIR Endpoint',
-        description: 'URL of the FHIR endpoint'
-
-      suite_option :smart_app_launch_version,
-        title: 'SMART App Launch Version',
-        list_options: [
-          {
-            label: 'SMART App Launch 1.0.0',
-            value: USCoreOptions::SMART_1
-          },
-          {
-            label: 'SMART App Launch 2.0.0',
-            value: USCoreOptions::SMART_2
-          }
-        ]
-
-      group from: :us_core_smart_app_launch
-
-      group do
-        input :smart_credentials,
-          title: 'OAuth Credentials',
-          type: :oauth_credentials,
-          optional: true
-
-        fhir_client do
-          url :url
-          oauth_credentials :smart_credentials
-        end
-
-        title 'US Core FHIR API'
-        id :us_core_v700_ballot_fhir_api
-
-        config(
-          options: {
-            tag_requests: true
-          }
-        )
-
-        group from: :us_core_v700_ballot_capability_statement
-      
-        group from: :us_core_v700_ballot_patient
-        group from: :us_core_v700_ballot_allergy_intolerance
-        group from: :us_core_v700_ballot_care_plan
-        group from: :us_core_v700_ballot_care_team
-        group from: :us_core_v700_ballot_condition_encounter_diagnosis
-        group from: :us_core_v700_ballot_condition_problems_health_concerns
-        group from: :us_core_v700_ballot_coverage
-        group from: :us_core_v700_ballot_device
-        group from: :us_core_v700_ballot_diagnostic_report_note
-        group from: :us_core_v700_ballot_diagnostic_report_lab
-        group from: :us_core_v700_ballot_document_reference
-        group from: :us_core_v700_ballot_encounter
-        group from: :us_core_v700_ballot_goal
-        group from: :us_core_v700_ballot_immunization
-        group from: :us_core_v700_ballot_medication_dispense
-        group from: :us_core_v700_ballot_medication_request
-        group from: :us_core_v700_ballot_observation_lab
-        group from: :us_core_v700_ballot_observation_pregnancystatus
-        group from: :us_core_v700_ballot_observation_pregnancyintent
-        group from: :us_core_v700_ballot_observation_occupation
-        group from: :us_core_v700_ballot_respiratory_rate
-        group from: :us_core_v700_ballot_simple_observation
-        group from: :us_core_v700_ballot_treatment_intervention_preference
-        group from: :us_core_v700_ballot_care_experience_preference
-        group from: :us_core_v700_ballot_heart_rate
-        group from: :us_core_v700_ballot_body_temperature
-        group from: :us_core_v700_ballot_pediatric_weight_for_height
-        group from: :us_core_v700_ballot_pulse_oximetry
-        group from: :us_core_v700_ballot_smokingstatus
-        group from: :us_core_v700_ballot_observation_sexual_orientation
-        group from: :us_core_v700_ballot_head_circumference
-        group from: :us_core_v700_ballot_body_height
-        group from: :us_core_v700_ballot_bmi
-        group from: :us_core_v700_ballot_observation_screening_assessment
-        group from: :us_core_v700_ballot_average_blood_pressure
-        group from: :us_core_v700_ballot_blood_pressure
-        group from: :us_core_v700_ballot_observation_clinical_result
-        group from: :us_core_v700_ballot_pediatric_bmi_for_age
-        group from: :us_core_v700_ballot_head_circumference_percentile
-        group from: :us_core_v700_ballot_body_weight
-        group from: :us_core_v700_ballot_procedure
-        group from: :us_core_v700_ballot_questionnaire_response
-        group from: :us_core_v700_ballot_service_request
-        group from: :us_core_v700_ballot_location
-        group from: :us_core_v700_ballot_organization
-        group from: :us_core_v700_ballot_practitioner
-        group from: :us_core_v700_ballot_practitioner_role
-        group from: :us_core_v700_ballot_provenance
-        group from: :us_core_v700_ballot_related_person
-        group from: :us_core_v700_ballot_specimen
-        group from: :us_core_v400_clinical_notes_guidance
-        group from: :us_core_v700_ballot_screening_assessment
-        group from: :us_core_311_data_absent_reason
-      end
-
-      group from: :us_core_v700_ballot_smart_granular_scopes,
-            required_suite_options: USCoreOptions::SMART_2_REQUIREMENT
-      
-    end
-  end
-end