us_core_test_kit 0.2.5 → 0.3.0

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/metadata.yml

@@ -0,0 +1,405 @@
+---
+:name: us_core_pulse_oximetry
+:class_name: USCorev501PulseOximetrySequence
+:version: v5.0.1
+:reformatted_version: v501
+:resource: Observation
+:profile_url: http://hl7.org/fhir/us/core/StructureDefinition/us-core-pulse-oximetry
+:profile_name: US Core Pulse Oximetry Profile
+:profile_version: 5.0.1
+:title: Observation Pulse Oximetry
+:short_description: Verify support for the server capabilities required by the US
+  Core Pulse Oximetry Profile.
+:interactions:
+- :code: create
+  :expectation: MAY
+- :code: search-type
+  :expectation: SHALL
+- :code: read
+  :expectation: SHALL
+- :code: vread
+  :expectation: SHOULD
+- :code: update
+  :expectation: MAY
+- :code: patch
+  :expectation: MAY
+- :code: delete
+  :expectation: MAY
+- :code: history-instance
+  :expectation: SHOULD
+- :code: history-type
+  :expectation: MAY
+:operations: []
+:searches:
+- :expectation: SHALL
+  :names:
+  - patient
+  - code
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHALL
+  :names:
+  - patient
+  - category
+  - date
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHOULD
+  :names:
+  - patient
+  - code
+  - date
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHALL
+  :names:
+  - patient
+  - category
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+- :expectation: SHOULD
+  :names:
+  - patient
+  - category
+  - status
+  :names_not_must_support_or_mandatory: []
+  :must_support_or_mandatory: true
+:search_definitions:
+  :patient:
+    :paths:
+    - subject
+    :full_paths:
+    - Observation.subject
+    :comparators: {}
+    :values: []
+    :type: Reference
+    :contains_multiple: false
+    :multiple_or: MAY
+  :category:
+    :paths:
+    - category
+    :full_paths:
+    - Observation.category
+    :comparators: {}
+    :values:
+    - vital-signs
+    :type: CodeableConcept
+    :contains_multiple: true
+    :multiple_or: MAY
+  :date:
+    :paths:
+    - effective
+    :full_paths:
+    - Observation.effective
+    :comparators:
+      :eq: MAY
+      :ne: MAY
+      :gt: SHALL
+      :ge: SHALL
+      :lt: SHALL
+      :le: SHALL
+      :sa: MAY
+      :eb: MAY
+      :ap: MAY
+    :values: []
+    :type: date
+    :contains_multiple: false
+    :multiple_or: MAY
+  :code:
+    :paths:
+    - code
+    :full_paths:
+    - Observation.code
+    :comparators: {}
+    :values:
+    - 59408-5
+    - 2708-6
+    :type: CodeableConcept
+    :contains_multiple: false
+    :multiple_or: SHOULD
+  :status:
+    :paths:
+    - status
+    :full_paths:
+    - Observation.status
+    :comparators: {}
+    :values:
+    - registered
+    - preliminary
+    - final
+    - amended
+    - corrected
+    - cancelled
+    - entered-in-error
+    - unknown
+    :type: code
+    :contains_multiple: false
+    :multiple_or: SHALL
+:include_params: []
+:revincludes:
+- Provenance:target
+:required_concepts: []
+:must_supports:
+  :extensions: []
+  :slices:
+  - :name: Observation.code.coding:PulseOx
+    :path: code.coding
+    :discriminator:
+      :type: patternCoding
+      :path: ''
+      :code: 59408-5
+      :system: http://loinc.org
+  - :name: Observation.code.coding:O2Sat
+    :path: code.coding
+    :discriminator:
+      :type: patternCoding
+      :path: ''
+      :code: 2708-6
+      :system: http://loinc.org
+  - :name: Observation.component:FlowRate
+    :path: component
+    :discriminator:
+      :type: patternCodeableConcept
+      :path: code
+      :code: 3151-8
+      :system: http://loinc.org
+  - :name: Observation.component:Concentration
+    :path: component
+    :discriminator:
+      :type: patternCodeableConcept
+      :path: code
+      :code: 3150-0
+      :system: http://loinc.org
+  - :name: Observation.category:VSCat
+    :path: category
+    :discriminator:
+      :type: value
+      :values:
+      - :path: coding.code
+        :value: vital-signs
+      - :path: coding.system
+        :value: http://terminology.hl7.org/CodeSystem/observation-category
+  :elements:
+  - :path: status
+  - :path: category
+  - :path: category.coding
+  - :path: category.coding.system
+    :fixed_value: http://terminology.hl7.org/CodeSystem/observation-category
+  - :path: category.coding.code
+    :fixed_value: vital-signs
+  - :path: code
+  - :path: code.coding
+  - :path: subject
+    :types:
+    - Reference
+  - :path: effectiveDateTime
+    :original_path: effective[x]
+  - :path: valueQuantity
+    :original_path: value[x]
+  - :path: component
+  - :path: component.code
+  - :path: component.valueQuantity
+    :original_path: component.value[x]
+  - :path: component.code.coding.code
+    :fixed_value: 3151-8
+  - :path: component.valueQuantity.system
+    :original_path: component.value[x].system
+    :fixed_value: http://unitsofmeasure.org
+  - :path: component.valueQuantity.code
+    :original_path: component.value[x].code
+    :fixed_value: L/min
+  - :path: component.code.coding.code
+    :fixed_value: 3150-0
+  - :path: component.valueQuantity.value
+    :original_path: component.value[x].value
+  - :path: component.valueQuantity.unit
+    :original_path: component.value[x].unit
+  - :path: component.valueQuantity.code
+    :original_path: component.value[x].code
+    :fixed_value: "%"
+:mandatory_elements:
+- Observation.status
+- Observation.category
+- Observation.category.coding
+- Observation.category.coding.system
+- Observation.category.coding.code
+- Observation.code
+- Observation.code.coding
+- Observation.subject
+- Observation.effective[x]
+- Observation.component.code
+- Observation.component.value[x].value
+- Observation.component.value[x].unit
+- Observation.component.value[x].system
+- Observation.component.value[x].code
+:bindings:
+- :type: code
+  :strength: preferred
+  :system: http://hl7.org/fhir/ValueSet/languages
+  :path: language
+- :type: code
+  :strength: required
+  :system: http://hl7.org/fhir/ValueSet/observation-status
+  :path: status
+- :type: CodeableConcept
+  :strength: preferred
+  :system: http://hl7.org/fhir/ValueSet/observation-category
+  :path: category
+- :type: CodeableConcept
+  :strength: preferred
+  :system: http://hl7.org/fhir/ValueSet/observation-category
+  :path: category
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/us/core/ValueSet/us-core-vital-signs
+  :path: code
+- :type: Quantity
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/ucum-vitals-common
+  :path: value
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
+  :path: dataAbsentReason
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
+  :path: interpretation
+- :type: CodeableConcept
+  :strength: example
+  :system: http://hl7.org/fhir/ValueSet/body-site
+  :path: bodySite
+- :type: CodeableConcept
+  :strength: example
+  :system: http://hl7.org/fhir/ValueSet/observation-methods
+  :path: method
+- :type: CodeableConcept
+  :strength: preferred
+  :system: http://hl7.org/fhir/ValueSet/referencerange-meaning
+  :path: referenceRange.type
+- :type: CodeableConcept
+  :strength: example
+  :system: http://hl7.org/fhir/ValueSet/referencerange-appliesto
+  :path: referenceRange.appliesTo
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/us/core/ValueSet/us-core-vital-signs
+  :path: component.code
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
+  :path: component.dataAbsentReason
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
+  :path: component.interpretation
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/us/core/ValueSet/us-core-vital-signs
+  :path: component.code
+- :type: code
+  :strength: required
+  :system: http://hl7.org/fhir/ValueSet/quantity-comparator
+  :path: component.value.comparator
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
+  :path: component.dataAbsentReason
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
+  :path: component.interpretation
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/us/core/ValueSet/us-core-vital-signs
+  :path: component.code
+- :type: code
+  :strength: required
+  :system: http://hl7.org/fhir/ValueSet/quantity-comparator
+  :path: component.value.comparator
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
+  :path: component.dataAbsentReason
+- :type: CodeableConcept
+  :strength: extensible
+  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
+  :path: component.interpretation
+:references:
+- :path: Observation.basedOn
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/CarePlan
+  - http://hl7.org/fhir/StructureDefinition/DeviceRequest
+  - http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation
+  - http://hl7.org/fhir/StructureDefinition/MedicationRequest
+  - http://hl7.org/fhir/StructureDefinition/NutritionOrder
+  - http://hl7.org/fhir/StructureDefinition/ServiceRequest
+- :path: Observation.partOf
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/MedicationAdministration
+  - http://hl7.org/fhir/StructureDefinition/MedicationDispense
+  - http://hl7.org/fhir/StructureDefinition/MedicationStatement
+  - http://hl7.org/fhir/StructureDefinition/Procedure
+  - http://hl7.org/fhir/StructureDefinition/Immunization
+  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
+- :path: Observation.subject
+  :profiles:
+  - http://hl7.org/fhir/us/core/StructureDefinition/us-core-patient
+- :path: Observation.focus
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Resource
+- :path: Observation.encounter
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Encounter
+- :path: Observation.performer
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Practitioner
+  - http://hl7.org/fhir/StructureDefinition/PractitionerRole
+  - http://hl7.org/fhir/StructureDefinition/Organization
+  - http://hl7.org/fhir/StructureDefinition/CareTeam
+  - http://hl7.org/fhir/StructureDefinition/Patient
+  - http://hl7.org/fhir/StructureDefinition/RelatedPerson
+- :path: Observation.specimen
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Specimen
+- :path: Observation.device
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/Device
+  - http://hl7.org/fhir/StructureDefinition/DeviceMetric
+- :path: Observation.hasMember
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
+  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
+  - http://hl7.org/fhir/StructureDefinition/vitalsigns
+- :path: Observation.derivedFrom
+  :profiles:
+  - http://hl7.org/fhir/StructureDefinition/DocumentReference
+  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
+  - http://hl7.org/fhir/StructureDefinition/Media
+  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
+  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
+  - http://hl7.org/fhir/StructureDefinition/vitalsigns
+:tests:
+- :id: us_core_v501_pulse_oximetry_patient_code_search_test
+  :file_name: pulse_oximetry_patient_code_search_test.rb
+- :id: us_core_v501_pulse_oximetry_patient_category_date_search_test
+  :file_name: pulse_oximetry_patient_category_date_search_test.rb
+- :id: us_core_v501_pulse_oximetry_patient_code_date_search_test
+  :file_name: pulse_oximetry_patient_code_date_search_test.rb
+- :id: us_core_v501_pulse_oximetry_patient_category_search_test
+  :file_name: pulse_oximetry_patient_category_search_test.rb
+- :id: us_core_v501_pulse_oximetry_patient_category_status_search_test
+  :file_name: pulse_oximetry_patient_category_status_search_test.rb
+- :id: us_core_v501_pulse_oximetry_read_test
+  :file_name: pulse_oximetry_read_test.rb
+- :id: us_core_v501_pulse_oximetry_provenance_revinclude_search_test
+  :file_name: pulse_oximetry_provenance_revinclude_search_test.rb
+- :id: us_core_v501_pulse_oximetry_validation_test
+  :file_name: pulse_oximetry_validation_test.rb
+- :id: us_core_v501_pulse_oximetry_must_support_test
+  :file_name: pulse_oximetry_must_support_test.rb
+- :id: us_core_v501_pulse_oximetry_reference_resolution_test
+  :file_name: pulse_oximetry_reference_resolution_test.rb
+:id: us_core_v501_pulse_oximetry
+:file_name: pulse_oximetry_group.rb
+:delayed_references: []

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/pulse_oximetry_must_support_test.rb

@@ -0,0 +1,59 @@
+require_relative '../../../must_support_test'
+
+module USCoreTestKit
+  module USCoreV501
+    class PulseOximetryMustSupportTest < Inferno::Test
+      include USCoreTestKit::MustSupportTest
+
+      title 'All must support elements are provided in the Observation resources returned'
+      description %(
+        US Core Responders SHALL be capable of populating all data elements as
+        part of the query results as specified by the US Core Server Capability
+        Statement. This test will look through the Observation resources
+        found previously for the following must support elements:
+
+        * Observation.category
+        * Observation.category.coding
+        * Observation.category.coding.code
+        * Observation.category.coding.system
+        * Observation.category:VSCat
+        * Observation.code
+        * Observation.code.coding
+        * Observation.code.coding:O2Sat
+        * Observation.code.coding:PulseOx
+        * Observation.component
+        * Observation.component.code
+        * Observation.component.code.coding.code
+        * Observation.component.valueQuantity
+        * Observation.component.valueQuantity.code
+        * Observation.component.valueQuantity.system
+        * Observation.component.valueQuantity.unit
+        * Observation.component.valueQuantity.value
+        * Observation.component:Concentration
+        * Observation.component:FlowRate
+        * Observation.effectiveDateTime
+        * Observation.status
+        * Observation.subject
+        * Observation.valueQuantity
+      )
+
+      id :us_core_v501_pulse_oximetry_must_support_test
+
+      def resource_type
+        'Observation'
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def scratch_resources
+        scratch[:pulse_oximetry_resources] ||= {}
+      end
+
+      run do
+        perform_must_support_test(all_scratch_resources)
+      end
+    end
+  end
+end

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/pulse_oximetry_patient_category_date_search_test.rb

@@ -0,0 +1,48 @@
+require_relative '../../../search_test'
+require_relative '../../../generator/group_metadata'
+
+module USCoreTestKit
+  module USCoreV501
+    class PulseOximetryPatientCategoryDateSearchTest < Inferno::Test
+      include USCoreTestKit::SearchTest
+
+      title 'Server returns valid results for Observation search by patient + category + date'
+      description %(
+A server SHALL support searching by
+patient + category + date on the Observation resource. This test
+will pass if resources are returned and match the search criteria. If
+none are returned, the test is skipped.
+
+[US Core Server CapabilityStatement](http://hl7.org/fhir/us/core//CapabilityStatement-us-core-server.html)
+
+      )
+
+      id :us_core_v501_pulse_oximetry_patient_category_date_search_test
+      input :patient_ids,
+        title: 'Patient IDs',
+        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
+  
+      def self.properties
+        @properties ||= SearchTestProperties.new(
+          resource_type: 'Observation',
+        search_param_names: ['patient', 'category', 'date'],
+        possible_status_search: true,
+        token_search_params: ['category'],
+        params_with_comparators: ['date']
+        )
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def scratch_resources
+        scratch[:pulse_oximetry_resources] ||= {}
+      end
+
+      run do
+        run_search_test
+      end
+    end
+  end
+end

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/pulse_oximetry_patient_category_search_test.rb

@@ -0,0 +1,47 @@
+require_relative '../../../search_test'
+require_relative '../../../generator/group_metadata'
+
+module USCoreTestKit
+  module USCoreV501
+    class PulseOximetryPatientCategorySearchTest < Inferno::Test
+      include USCoreTestKit::SearchTest
+
+      title 'Server returns valid results for Observation search by patient + category'
+      description %(
+A server SHALL support searching by
+patient + category on the Observation resource. This test
+will pass if resources are returned and match the search criteria. If
+none are returned, the test is skipped.
+
+[US Core Server CapabilityStatement](http://hl7.org/fhir/us/core//CapabilityStatement-us-core-server.html)
+
+      )
+
+      id :us_core_v501_pulse_oximetry_patient_category_search_test
+      input :patient_ids,
+        title: 'Patient IDs',
+        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
+  
+      def self.properties
+        @properties ||= SearchTestProperties.new(
+          resource_type: 'Observation',
+        search_param_names: ['patient', 'category'],
+        possible_status_search: true,
+        token_search_params: ['category']
+        )
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def scratch_resources
+        scratch[:pulse_oximetry_resources] ||= {}
+      end
+
+      run do
+        run_search_test
+      end
+    end
+  end
+end

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/pulse_oximetry_patient_category_status_search_test.rb

@@ -0,0 +1,49 @@
+require_relative '../../../search_test'
+require_relative '../../../generator/group_metadata'
+
+module USCoreTestKit
+  module USCoreV501
+    class PulseOximetryPatientCategoryStatusSearchTest < Inferno::Test
+      include USCoreTestKit::SearchTest
+
+      title 'Server returns valid results for Observation search by patient + category + status'
+      description %(
+A server SHOULD support searching by
+patient + category + status on the Observation resource. This test
+will pass if resources are returned and match the search criteria. If
+none are returned, the test is skipped.
+
+[US Core Server CapabilityStatement](http://hl7.org/fhir/us/core//CapabilityStatement-us-core-server.html)
+
+      )
+
+      id :us_core_v501_pulse_oximetry_patient_category_status_search_test
+      optional
+  
+      input :patient_ids,
+        title: 'Patient IDs',
+        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
+  
+      def self.properties
+        @properties ||= SearchTestProperties.new(
+          resource_type: 'Observation',
+        search_param_names: ['patient', 'category', 'status'],
+        token_search_params: ['category'],
+        multiple_or_search_params: ['status']
+        )
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def scratch_resources
+        scratch[:pulse_oximetry_resources] ||= {}
+      end
+
+      run do
+        run_search_test
+      end
+    end
+  end
+end

data/lib/us_core_test_kit/generated/v5.0.1/pulse_oximetry/pulse_oximetry_patient_code_date_search_test.rb

@@ -0,0 +1,50 @@
+require_relative '../../../search_test'
+require_relative '../../../generator/group_metadata'
+
+module USCoreTestKit
+  module USCoreV501
+    class PulseOximetryPatientCodeDateSearchTest < Inferno::Test
+      include USCoreTestKit::SearchTest
+
+      title 'Server returns valid results for Observation search by patient + code + date'
+      description %(
+A server SHOULD support searching by
+patient + code + date on the Observation resource. This test
+will pass if resources are returned and match the search criteria. If
+none are returned, the test is skipped.
+
+[US Core Server CapabilityStatement](http://hl7.org/fhir/us/core//CapabilityStatement-us-core-server.html)
+
+      )
+
+      id :us_core_v501_pulse_oximetry_patient_code_date_search_test
+      optional
+  
+      input :patient_ids,
+        title: 'Patient IDs',
+        description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
+  
+      def self.properties
+        @properties ||= SearchTestProperties.new(
+          resource_type: 'Observation',
+        search_param_names: ['patient', 'code', 'date'],
+        possible_status_search: true,
+        token_search_params: ['code'],
+        params_with_comparators: ['date']
+        )
+      end
+
+      def self.metadata
+        @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
+      end
+
+      def scratch_resources
+        scratch[:pulse_oximetry_resources] ||= {}
+      end
+
+      run do
+        run_search_test
+      end
+    end
+  end
+end