us_core_test_kit 0.1.1 → 0.2.2

data/lib/us_core_test_kit/generated/bodytemp/bodytemp_patient_code_search_test.rb

@@ -1,62 +0,0 @@
-require_relative '../../search_test'
-require_relative '../../generator/group_metadata'
-
-module USCoreTestKit
-  class BodytempPatientCodeSearchTest < Inferno::Test
-    include USCoreTestKit::SearchTest
-
-    title 'Server returns valid results for Observation search by patient + code'
-    description %(
-A server SHALL support searching by
-patient + code on the Observation resource. This test
-will pass if resources are returned and match the search criteria. If
-none are returned, the test is skipped.
-
-This test verifies that the server supports searching by reference using
-the form `patient=[id]` as well as `patient=Patient/[id]`. The two
-different forms are expected to return the same number of results. US
-Core requires that both forms are supported by US Core responders.
-
-Because this is the first search of the sequence, resources in the
-response will be used for subsequent tests.
-
-Additionally, this test will check that GET and POST search methods
-return the same number of results. Search by POST is required by the
-FHIR R4 specification, and these tests interpret search by GET as a
-requirement of US Core v3.1.1.
-
-[US Core Server CapabilityStatement](http://hl7.org/fhir/us/core/STU3.1.1/CapabilityStatement-us-core-server.html)
-
-    )
-
-    id :us_core_311_bodytemp_patient_code_search_test
-    input :patient_ids,
-      title: 'Patient IDs',
-      description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
-
-    def self.properties
-      @properties ||= SearchTestProperties.new(
-        first_search: true,
-        fixed_value_search: true,
-        resource_type: 'Observation',
-        search_param_names: ['patient', 'code'],
-        possible_status_search: true,
-        token_search_params: ['code'],
-        test_reference_variants: true,
-        test_post_search: true
-      )
-    end
-
-    def self.metadata
-      @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
-    end
-
-    def scratch_resources
-      scratch[:bodytemp_resources] ||= {}
-    end
-
-    run do
-      run_search_test
-    end
-  end
-end

data/lib/us_core_test_kit/generated/bodytemp/bodytemp_provenance_revinclude_search_test.rb

@@ -1,51 +0,0 @@
-require_relative '../../search_test'
-require_relative '../../generator/group_metadata'
-
-module USCoreTestKit
-  class BodytempProvenanceRevincludeSearchTest < Inferno::Test
-    include USCoreTestKit::SearchTest
-
-    title 'Server returns Provenance resources from Observation search by patient + code + revInclude:Provenance:target'
-    description %(
-      A server SHALL be capable of supporting _revIncludes:Provenance:target.
-
-      This test will perform a search by patient + code + revInclude:Provenance:target and
-      will pass if a Provenance resource is found in the response.
-    %)
-
-    id :us_core_311_bodytemp_provenance_revinclude_search_test
-
-    input :patient_ids,
-      title: 'Patient IDs',
-      description: 'Comma separated list of patient IDs that in sum contain all MUST SUPPORT elements'
-
-    def properties
-      @properties ||= SearchTestProperties.new(
-        fixed_value_search: true,
-        resource_type: 'Observation',
-        search_param_names: ['patient', 'code'],
-        possible_status_search: true
-      )
-    end
-
-    def self.metadata
-      @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
-    end
-
-    def self.provenance_metadata
-      @provenance_metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, '..', 'provenance', 'metadata.yml')))
-    end
-
-    def scratch_resources
-      scratch[:bodytemp_resources] ||= {}
-    end
-
-    def scratch_provenance_resources
-      scratch[:provenance_resources] ||= {}
-    end
-
-    run do
-      run_provenance_revinclude_search_test
-    end
-  end
-end

data/lib/us_core_test_kit/generated/bodytemp/bodytemp_read_test.rb

@@ -1,24 +0,0 @@
-require_relative '../../read_test'
-
-module USCoreTestKit
-  class BodytempReadTest < Inferno::Test
-    include USCoreTestKit::ReadTest
-
-    title 'Server returns correct Observation resource from Observation read interaction'
-    description 'A server SHALL support the Observation read interaction.'
-
-    id :us_core_311_bodytemp_read_test
-
-    def resource_type
-      'Observation'
-    end
-
-    def scratch_resources
-      scratch[:bodytemp_resources] ||= {}
-    end
-
-    run do
-      perform_read_test(all_scratch_resources)
-    end
-  end
-end

data/lib/us_core_test_kit/generated/bodytemp/bodytemp_reference_resolution_test.rb

@@ -1,28 +0,0 @@
-require_relative '../../reference_resolution_test'
-
-module USCoreTestKit
-  class BodytempReferenceResolutionTest < Inferno::Test
-    include USCoreTestKit::ReferenceResolutionTest
-
-    title 'Every reference within Observation resources can be read'
-    description %(
-      This test will attempt to read the first 50 references found in the
-      resources from the first search. The test will fail if Inferno fails to
-      read any of those references.
-    )
-
-    id :us_core_311_bodytemp_reference_resolution_test
-
-    def resource_type
-      'Observation'
-    end
-
-    def scratch_resources
-      scratch[:bodytemp_resources] ||= {}
-    end
-
-    run do
-      perform_reference_resolution_test(scratch_resources[:all])
-    end
-  end
-end

data/lib/us_core_test_kit/generated/bodytemp/bodytemp_validation_test.rb

@@ -1,34 +0,0 @@
-require_relative '../../validation_test'
-
-module USCoreTestKit
-  class BodytempValidationTest < Inferno::Test
-    include USCoreTestKit::ValidationTest
-
-    id :us_core_311_bodytemp_validation_test
-    title 'Observation resources returned during previous tests conform to the Observation Body Temperature Profile'
-    description %(
-This test verifies resources returned from the first search conform to
-the [Observation Body Temperature Profile](http://hl7.org/fhir/StructureDefinition/bodytemp).
-
-It verifies the presence of mandatory elements and that elements with
-required bindings contain appropriate values. CodeableConcept element
-bindings will fail if none of their codings have a code/system belonging
-to the bound ValueSet. Quantity, Coding, and code element bindings will
-fail if their code/system are not found in the valueset.
-
-    )
-    output :dar_code_found, :dar_extension_found
-
-    def resource_type
-      'Observation'
-    end
-
-    def scratch_resources
-      scratch[:bodytemp_resources] ||= {}
-    end
-
-    run do
-      perform_validation_test(scratch_resources[:all] || [], 'http://hl7.org/fhir/StructureDefinition/bodytemp')
-    end
-  end
-end

data/lib/us_core_test_kit/generated/bodytemp/metadata.yml

@@ -1,328 +0,0 @@
----
-:name: bodytemp
-:class_name: BodytempSequence
-:version: v3.1.1
-:reformatted_version: v311
-:resource: Observation
-:profile_url: http://hl7.org/fhir/StructureDefinition/bodytemp
-:profile_name: Observation Body Temperature Profile
-:title: Observation Body Temperature
-:short_description: Verify support for the server capabilities required by the Observation
-  Body Temperature Profile.
-:interactions:
-- :code: create
-  :expectation: MAY
-- :code: search-type
-  :expectation: SHALL
-- :code: read
-  :expectation: SHALL
-- :code: vread
-  :expectation: SHOULD
-- :code: update
-  :expectation: MAY
-- :code: patch
-  :expectation: MAY
-- :code: delete
-  :expectation: MAY
-- :code: history-instance
-  :expectation: SHOULD
-- :code: history-type
-  :expectation: MAY
-:operations: []
-:searches:
-- :expectation: SHALL
-  :names:
-  - patient
-  - code
-  :names_not_must_support_or_mandatory: []
-  :must_support_or_mandatory: true
-- :expectation: SHALL
-  :names:
-  - patient
-  - category
-  - date
-  :names_not_must_support_or_mandatory: []
-  :must_support_or_mandatory: true
-- :expectation: SHOULD
-  :names:
-  - patient
-  - category
-  - status
-  :names_not_must_support_or_mandatory: []
-  :must_support_or_mandatory: true
-- :expectation: SHOULD
-  :names:
-  - patient
-  - code
-  - date
-  :names_not_must_support_or_mandatory: []
-  :must_support_or_mandatory: true
-- :expectation: SHALL
-  :names:
-  - patient
-  - category
-  :names_not_must_support_or_mandatory: []
-  :must_support_or_mandatory: true
-:search_definitions:
-  :patient:
-    :path: subject
-    :full_path: Observation.subject
-    :comparators: {}
-    :values: []
-    :type: Reference
-    :contains_multiple: false
-    :multiple_or: MAY
-  :category:
-    :path: category
-    :full_path: Observation.category
-    :comparators: {}
-    :values:
-    - vital-signs
-    :type: CodeableConcept
-    :contains_multiple: true
-    :multiple_or: MAY
-  :date:
-    :path: effective
-    :full_path: Observation.effective
-    :comparators:
-      :eq: MAY
-      :ne: MAY
-      :gt: SHALL
-      :ge: SHALL
-      :lt: SHALL
-      :le: SHALL
-      :sa: MAY
-      :eb: MAY
-      :ap: MAY
-    :values: []
-    :type: date
-    :contains_multiple: false
-    :multiple_or: MAY
-  :status:
-    :path: status
-    :full_path: Observation.status
-    :comparators: {}
-    :values:
-    - registered
-    - preliminary
-    - final
-    - amended
-    - corrected
-    - cancelled
-    - entered-in-error
-    - unknown
-    :type: code
-    :contains_multiple: false
-    :multiple_or: SHALL
-  :code:
-    :path: code
-    :full_path: Observation.code
-    :comparators: {}
-    :values:
-    - 8310-5
-    :type: CodeableConcept
-    :contains_multiple: false
-    :multiple_or: SHOULD
-:include_params: []
-:revincludes:
-- Provenance:target
-:required_concepts:
-:must_supports:
-  :extensions: []
-  :slices:
-  - :name: Observation.value[x]:valueQuantity
-    :path: value[x]
-    :discriminator:
-      :type: type
-      :code: Quantity
-  - :name: Observation.category:VSCat
-    :path: category
-    :discriminator:
-      :type: value
-      :values:
-      - :path: coding.code
-        :value: vital-signs
-      - :path: coding.system
-        :value: http://terminology.hl7.org/CodeSystem/observation-category
-  :elements:
-  - :path: status
-  - :path: category
-  - :path: category.coding
-  - :path: category.coding.system
-    :fixed_value: http://terminology.hl7.org/CodeSystem/observation-category
-  - :path: category.coding.code
-    :fixed_value: vital-signs
-  - :path: code
-  - :path: subject
-  - :path: effective[x]
-  - :path: value[x]
-  - :path: value[x].value
-  - :path: value[x].unit
-  - :path: value[x].system
-    :fixed_value: http://unitsofmeasure.org
-  - :path: value[x].code
-:mandatory_elements:
-- Observation.status
-- Observation.category
-- Observation.category
-- Observation.category.coding
-- Observation.category.coding.system
-- Observation.category.coding.code
-- Observation.code
-- Observation.code.coding
-- Observation.code.coding.system
-- Observation.code.coding.code
-- Observation.subject
-- Observation.effective[x]
-- Observation.value[x].value
-- Observation.value[x].unit
-- Observation.value[x].system
-- Observation.value[x].code
-- Observation.component.code
-:bindings:
-- :type: code
-  :strength: preferred
-  :system: http://hl7.org/fhir/ValueSet/languages
-  :path: language
-- :type: code
-  :strength: required
-  :system: http://hl7.org/fhir/ValueSet/observation-status
-  :path: status
-- :type: CodeableConcept
-  :strength: preferred
-  :system: http://hl7.org/fhir/ValueSet/observation-category
-  :path: category
-- :type: CodeableConcept
-  :strength: preferred
-  :system: http://hl7.org/fhir/ValueSet/observation-category
-  :path: category
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/observation-vitalsignresult
-  :path: code
-- :type: code
-  :strength: required
-  :system: http://hl7.org/fhir/ValueSet/quantity-comparator
-  :path: value.comparator
-- :type: code
-  :strength: required
-  :system: http://hl7.org/fhir/ValueSet/ucum-bodytemp
-  :path: value.code
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
-  :path: dataAbsentReason
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
-  :path: interpretation
-- :type: CodeableConcept
-  :strength: example
-  :system: http://hl7.org/fhir/ValueSet/body-site
-  :path: bodySite
-- :type: CodeableConcept
-  :strength: example
-  :system: http://hl7.org/fhir/ValueSet/observation-methods
-  :path: method
-- :type: CodeableConcept
-  :strength: preferred
-  :system: http://hl7.org/fhir/ValueSet/referencerange-meaning
-  :path: referenceRange.type
-- :type: CodeableConcept
-  :strength: example
-  :system: http://hl7.org/fhir/ValueSet/referencerange-appliesto
-  :path: referenceRange.appliesTo
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/observation-vitalsignresult
-  :path: component.code
-- :type: Quantity
-  :strength: required
-  :system: http://hl7.org/fhir/ValueSet/ucum-vitals-common
-  :path: component.value
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/data-absent-reason
-  :path: component.dataAbsentReason
-- :type: CodeableConcept
-  :strength: extensible
-  :system: http://hl7.org/fhir/ValueSet/observation-interpretation
-  :path: component.interpretation
-:references:
-- :path: Observation.basedOn
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/CarePlan
-  - http://hl7.org/fhir/StructureDefinition/DeviceRequest
-  - http://hl7.org/fhir/StructureDefinition/ImmunizationRecommendation
-  - http://hl7.org/fhir/StructureDefinition/MedicationRequest
-  - http://hl7.org/fhir/StructureDefinition/NutritionOrder
-  - http://hl7.org/fhir/StructureDefinition/ServiceRequest
-- :path: Observation.partOf
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/MedicationAdministration
-  - http://hl7.org/fhir/StructureDefinition/MedicationDispense
-  - http://hl7.org/fhir/StructureDefinition/MedicationStatement
-  - http://hl7.org/fhir/StructureDefinition/Procedure
-  - http://hl7.org/fhir/StructureDefinition/Immunization
-  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
-- :path: Observation.subject
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Patient
-- :path: Observation.focus
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Resource
-- :path: Observation.encounter
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Encounter
-- :path: Observation.performer
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Practitioner
-  - http://hl7.org/fhir/StructureDefinition/PractitionerRole
-  - http://hl7.org/fhir/StructureDefinition/Organization
-  - http://hl7.org/fhir/StructureDefinition/CareTeam
-  - http://hl7.org/fhir/StructureDefinition/Patient
-  - http://hl7.org/fhir/StructureDefinition/RelatedPerson
-- :path: Observation.specimen
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Specimen
-- :path: Observation.device
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/Device
-  - http://hl7.org/fhir/StructureDefinition/DeviceMetric
-- :path: Observation.hasMember
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
-  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
-  - http://hl7.org/fhir/StructureDefinition/vitalsigns
-- :path: Observation.derivedFrom
-  :profiles:
-  - http://hl7.org/fhir/StructureDefinition/DocumentReference
-  - http://hl7.org/fhir/StructureDefinition/ImagingStudy
-  - http://hl7.org/fhir/StructureDefinition/Media
-  - http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse
-  - http://hl7.org/fhir/StructureDefinition/MolecularSequence
-  - http://hl7.org/fhir/StructureDefinition/vitalsigns
-:tests:
-- :id: us_core_311_bodytemp_patient_code_search_test
-  :file_name: bodytemp_patient_code_search_test.rb
-- :id: us_core_311_bodytemp_patient_category_date_search_test
-  :file_name: bodytemp_patient_category_date_search_test.rb
-- :id: us_core_311_bodytemp_patient_category_status_search_test
-  :file_name: bodytemp_patient_category_status_search_test.rb
-- :id: us_core_311_bodytemp_patient_code_date_search_test
-  :file_name: bodytemp_patient_code_date_search_test.rb
-- :id: us_core_311_bodytemp_patient_category_search_test
-  :file_name: bodytemp_patient_category_search_test.rb
-- :id: us_core_311_bodytemp_read_test
-  :file_name: bodytemp_read_test.rb
-- :id: us_core_311_bodytemp_provenance_revinclude_search_test
-  :file_name: bodytemp_provenance_revinclude_search_test.rb
-- :id: us_core_311_bodytemp_validation_test
-  :file_name: bodytemp_validation_test.rb
-- :id: us_core_311_bodytemp_must_support_test
-  :file_name: bodytemp_must_support_test.rb
-- :id: us_core_311_bodytemp_reference_resolution_test
-  :file_name: bodytemp_reference_resolution_test.rb
-:id: us_core_311_bodytemp
-:file_name: bodytemp_group.rb
-:delayed_references: []

data/lib/us_core_test_kit/generated/bodytemp_group.rb

@@ -1,93 +0,0 @@
-require_relative 'bodytemp/bodytemp_patient_code_search_test'
-require_relative 'bodytemp/bodytemp_patient_category_date_search_test'
-require_relative 'bodytemp/bodytemp_patient_category_status_search_test'
-require_relative 'bodytemp/bodytemp_patient_code_date_search_test'
-require_relative 'bodytemp/bodytemp_patient_category_search_test'
-require_relative 'bodytemp/bodytemp_read_test'
-require_relative 'bodytemp/bodytemp_provenance_revinclude_search_test'
-require_relative 'bodytemp/bodytemp_validation_test'
-require_relative 'bodytemp/bodytemp_must_support_test'
-require_relative 'bodytemp/bodytemp_reference_resolution_test'
-
-module USCoreTestKit
-  class BodytempGroup < Inferno::TestGroup
-    title 'Observation Body Temperature Tests'
-    short_description 'Verify support for the server capabilities required by the Observation Body Temperature Profile.'
-    description %(
-# Background
-
-The US Core Observation Body Temperature sequence verifies that the system under test is
-able to provide correct responses for Observation queries. These queries
-must contain resources conforming to the Observation Body Temperature Profile as
-specified in the US Core v3.1.1 Implementation Guide.
-
-# Testing Methodology
-## Searching
-This test sequence will first perform each required search associated
-with this resource. This sequence will perform searches with the
-following parameters:
-
-* patient + code
-* patient + category + date
-* patient + category
-
-### Search Parameters
-The first search uses the selected patient(s) from the prior launch
-sequence. Any subsequent searches will look for its parameter values
-from the results of the first search. For example, the `identifier`
-search in the patient sequence is performed by looking for an existing
-`Patient.identifier` from any of the resources returned in the `_id`
-search. If a value cannot be found this way, the search is skipped.
-
-### Search Validation
-Inferno will retrieve up to the first 20 bundle pages of the reply for
-Observation resources and save them for subsequent tests. Each of
-these resources is then checked to see if it matches the searched
-parameters in accordance with [FHIR search
-guidelines](https://www.hl7.org/fhir/search.html). The test will fail,
-for example, if a Patient search for `gender=male` returns a `female`
-patient.
-
-
-## Must Support
-Each profile contains elements marked as "must support". This test
-sequence expects to see each of these elements at least once. If at
-least one cannot be found, the test will fail. The test will look
-through the Observation resources found in the first test for these
-elements.
-
-## Profile Validation
-Each resource returned from the first search is expected to conform to
-the [Observation Body Temperature Profile](http://hl7.org/fhir/StructureDefinition/bodytemp). Each element is checked against
-teminology binding and cardinality requirements.
-
-Elements with a required binding are validated against their bound
-ValueSet. If the code/system in the element is not part of the ValueSet,
-then the test will fail.
-
-## Reference Validation
-Each reference within the resources found from the previous tests must
-resolve. The test will attempt to read each reference found and will
-fail if any attempted read fails.
-
-    )
-
-    id :us_core_311_bodytemp
-    run_as_group
-
-    def self.metadata
-      @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'bodytemp', 'metadata.yml')))
-    end
-
-    test from: :us_core_311_bodytemp_patient_code_search_test
-    test from: :us_core_311_bodytemp_patient_category_date_search_test
-    test from: :us_core_311_bodytemp_patient_category_status_search_test
-    test from: :us_core_311_bodytemp_patient_code_date_search_test
-    test from: :us_core_311_bodytemp_patient_category_search_test
-    test from: :us_core_311_bodytemp_read_test
-    test from: :us_core_311_bodytemp_provenance_revinclude_search_test
-    test from: :us_core_311_bodytemp_validation_test
-    test from: :us_core_311_bodytemp_must_support_test
-    test from: :us_core_311_bodytemp_reference_resolution_test
-  end
-end

data/lib/us_core_test_kit/generated/bodyweight/bodyweight_must_support_test.rb

@@ -1,49 +0,0 @@
-require_relative '../../must_support_test'
-
-module USCoreTestKit
-  class BodyweightMustSupportTest < Inferno::Test
-    include USCoreTestKit::MustSupportTest
-
-    title 'All must support elements are provided in the Observation resources returned'
-    description %(
-      US Core Responders SHALL be capable of populating all data elements as
-      part of the query results as specified by the US Core Server Capability
-      Statement. This test will look through the Observation resources
-      found previously for the following must support elements:
-
-      * Observation.category
-      * Observation.category.coding
-      * Observation.category.coding.code
-      * Observation.category.coding.system
-      * Observation.category:VSCat
-      * Observation.code
-      * Observation.effective[x]
-      * Observation.status
-      * Observation.subject
-      * Observation.value[x]
-      * Observation.value[x].code
-      * Observation.value[x].system
-      * Observation.value[x].unit
-      * Observation.value[x].value
-      * Observation.value[x]:valueQuantity
-    )
-
-    id :us_core_311_bodyweight_must_support_test
-
-    def resource_type
-      'Observation'
-    end
-
-    def self.metadata
-      @metadata ||= Generator::GroupMetadata.new(YAML.load_file(File.join(__dir__, 'metadata.yml')))
-    end
-
-    def scratch_resources
-      scratch[:bodyweight_resources] ||= {}
-    end
-
-    run do
-      perform_must_support_test(all_scratch_resources)
-    end
-  end
-end