unipept 3.0.0 → 3.0.1
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- checksums.yaml +4 -4
- data/Gemfile +3 -0
- data/Gemfile.lock +1 -0
- data/VERSION +1 -1
- data/unipept.gemspec +6 -4
- metadata +17 -3
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
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SHA256:
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 7ae25b4963b7859c29cacb41da52979f14d5c4c475bcf301b39c4b462484d491
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4
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data.tar.gz: 9964dc3d83bb794673a067a9aac45cd638b6248230972c2ea02a13dab4beaba4
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: de2af48a091dc98dc745c451433fa91fcb95ba056fe0fda4520a455568de93f7b60125e9e5c4bb4c27fc97c35d8464daf3c09c371b19e6bcb51f516af9b6eff9
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7
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+
data.tar.gz: 3952e4ec06d8f64a0c536f3cb02fba11d6470fc63b0aaa6d4ba3dcbdb2c0f77ed02857559962ea2458f7642f59c2bb67276e7c5a0915745eda1ec0f445a1b1e9
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data/Gemfile
CHANGED
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@@ -4,6 +4,9 @@ source 'http://rubygems.org'
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4
4
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gem 'cri', '~>2.15.10'
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5
5
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gem 'typhoeus', '~> 1.3.1'
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6
6
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7
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+
# this is not explicitly used, but an older incompatible version comes bundled with ruby
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8
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+
gem 'psych', '~> 4.0.3'
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9
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+
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7
10
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group :development do
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8
11
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gem 'minitest', '~> 5.14'
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9
12
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gem 'rake', '~> 13.0.1'
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data/Gemfile.lock
CHANGED
data/VERSION
CHANGED
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@@ -1 +1 @@
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1
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-
3.0.
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1
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+
3.0.1
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data/unipept.gemspec
CHANGED
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@@ -2,16 +2,16 @@
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2
2
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# DO NOT EDIT THIS FILE DIRECTLY
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3
3
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# Instead, edit Juwelier::Tasks in Rakefile, and run 'rake gemspec'
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4
4
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# -*- encoding: utf-8 -*-
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5
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-
# stub: unipept 3.0.
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5
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+
# stub: unipept 3.0.1 ruby lib
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6
6
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7
7
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Gem::Specification.new do |s|
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|
8
8
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s.name = "unipept".freeze
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9
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-
s.version = "3.0.
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9
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+
s.version = "3.0.1"
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10
10
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11
11
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s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
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12
12
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s.require_paths = ["lib".freeze]
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13
13
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s.authors = ["Bart Mesuere".freeze, "Pieter Verschaffelt".freeze, "Toon Willems".freeze, "Tom Naessens".freeze]
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|
14
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-
s.date = "2022-04-
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|
14
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+
s.date = "2022-04-27"
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15
15
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s.description = " Command line interface to the Unipept (http://unipept.ugent.be) web services\n (pept2lca, taxa2lca, pept2taxa, pept2prot and taxonomy) and some utility\n commands for handling proteins using the command line.\n".freeze
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16
16
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s.email = "unipept@ugent.be".freeze
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17
17
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s.executables = ["unipept".freeze, "prot2pept".freeze, "peptfilter".freeze, "uniprot".freeze]
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@@ -105,7 +105,7 @@ Gem::Specification.new do |s|
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105
105
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s.homepage = "http://unipept.ugent.be".freeze
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106
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s.licenses = ["MIT".freeze]
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107
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s.required_ruby_version = Gem::Requirement.new(">= 2.6.0".freeze)
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108
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-
s.rubygems_version = "3.
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108
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+
s.rubygems_version = "3.2.15".freeze
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109
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s.summary = "Command line interface to Unipept web services.".freeze
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110
110
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111
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if s.respond_to? :specification_version then
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@@ -115,12 +115,14 @@ Gem::Specification.new do |s|
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115
115
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if s.respond_to? :add_runtime_dependency then
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116
116
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s.add_runtime_dependency(%q<cri>.freeze, ["~> 2.15.10"])
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117
117
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s.add_runtime_dependency(%q<typhoeus>.freeze, ["~> 1.3.1"])
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118
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+
s.add_runtime_dependency(%q<psych>.freeze, ["~> 4.0.3"])
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118
119
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s.add_development_dependency(%q<minitest>.freeze, ["~> 5.14"])
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119
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s.add_development_dependency(%q<rake>.freeze, ["~> 13.0.1"])
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120
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s.add_development_dependency(%q<rubocop>.freeze, ["~> 1.11"])
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121
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else
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122
123
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s.add_dependency(%q<cri>.freeze, ["~> 2.15.10"])
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123
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s.add_dependency(%q<typhoeus>.freeze, ["~> 1.3.1"])
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125
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+
s.add_dependency(%q<psych>.freeze, ["~> 4.0.3"])
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124
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s.add_dependency(%q<minitest>.freeze, ["~> 5.14"])
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s.add_dependency(%q<rake>.freeze, ["~> 13.0.1"])
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126
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s.add_dependency(%q<rubocop>.freeze, ["~> 1.11"])
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metadata
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: unipept
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 3.0.
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4
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+
version: 3.0.1
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5
5
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platform: ruby
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6
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authors:
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7
7
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- Bart Mesuere
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@@ -11,7 +11,7 @@ authors:
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11
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autorequire:
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12
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bindir: bin
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13
13
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cert_chain: []
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14
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-
date: 2022-04-
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14
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+
date: 2022-04-27 00:00:00.000000000 Z
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15
15
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dependencies:
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16
16
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- !ruby/object:Gem::Dependency
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17
17
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name: cri
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@@ -41,6 +41,20 @@ dependencies:
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41
41
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- - "~>"
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42
42
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- !ruby/object:Gem::Version
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43
43
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version: 1.3.1
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44
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+
- !ruby/object:Gem::Dependency
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|
45
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+
name: psych
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|
46
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+
requirement: !ruby/object:Gem::Requirement
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|
47
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+
requirements:
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48
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+
- - "~>"
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|
49
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+
- !ruby/object:Gem::Version
|
|
50
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+
version: 4.0.3
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|
51
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+
type: :runtime
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52
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+
prerelease: false
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53
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+
version_requirements: !ruby/object:Gem::Requirement
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|
54
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+
requirements:
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55
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+
- - "~>"
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|
56
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+
- !ruby/object:Gem::Version
|
|
57
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+
version: 4.0.3
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|
44
58
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- !ruby/object:Gem::Dependency
|
|
45
59
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name: minitest
|
|
46
60
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requirement: !ruby/object:Gem::Requirement
|
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@@ -198,7 +212,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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|
198
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- !ruby/object:Gem::Version
|
|
199
213
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version: '0'
|
|
200
214
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requirements: []
|
|
201
|
-
rubygems_version: 3.
|
|
215
|
+
rubygems_version: 3.2.15
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|
202
216
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signing_key:
|
|
203
217
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specification_version: 4
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|
204
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summary: Command line interface to Unipept web services.
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