unipept 1.1.1 → 1.1.2

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: f9e7aed1832989eddf44ce10e5ae42dc4976bf31
-  data.tar.gz: d23fd6021eeb04bc4c6cb9b077f0fca978422f38
+  metadata.gz: f1754c5a267fc5f4693eac69a39829976faf9ef2
+  data.tar.gz: 51466d18f6e9938285c3a6f9c0ff792744a37f67
 SHA512:
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+  metadata.gz: df489439d29c756b4694d400ab23770fef551e5368023c2cd626e3c0eceaef377c1d46b4bfe912a157efc1d88f92fb8a3bef3938c3726176a57dc6933fcab1f9
+  data.tar.gz: 3cf20e18248e59b2f1f777b69ca022da8b83b2964fa9ea06301e77ca6946507a53043472156e44cce5e8a6e861b292b3e1558e65b7a9a17265adff407f500a38

data/.travis.yml

@@ -1,10 +1,9 @@
 language: ruby
 rvm:
-  - 2.3.1
+  - 2.3.3
   - 2.2.5
   - 2.1.9
   - 2.0.0
-  - 1.9.3
-#  - jruby-19mode
+
 notifications:
   slack: zeuswpi:yBidVPnaP2JuP2zfa36Ew0E1

data/Rakefile

@@ -28,7 +28,7 @@ Jeweler::Tasks.new do |gem|
   EOS
   gem.email = 'unipept@ugent.be'
   gem.authors = ['Toon Willems', 'Bart Mesuere', 'Tom Naessens']
-  gem.required_ruby_version = '>= 1.9.3'
+  gem.required_ruby_version = '>= 2.0.0'
 end
 Jeweler::RubygemsDotOrgTasks.new
 

data/VERSION

@@ -1 +1 @@
-1.1.1
+1.1.2

data/bin/peptfilter

@@ -1,7 +1,7 @@
 #!/usr/bin/env ruby
 require_relative '../lib/commands'
 
-Signal.trap('PIPE', 'EXIT')
-Signal.trap('INT', 'EXIT')
+Signal.trap('PIPE', 'EXIT') if Signal.list.include? 'PIPE'
+Signal.trap('INT', 'EXIT') if Signal.list.include? 'INT'
 
 Unipept::Commands::Peptfilter.run(ARGV)

data/bin/prot2pept

@@ -1,7 +1,7 @@
 #!/usr/bin/env ruby
 require_relative '../lib/commands'
 
-Signal.trap('PIPE', 'EXIT')
-Signal.trap('INT', 'EXIT')
+Signal.trap('PIPE', 'EXIT') if Signal.list.include? 'PIPE'
+Signal.trap('INT', 'EXIT') if Signal.list.include? 'INT'
 
 Unipept::Commands::Prot2pept.run(ARGV)

data/bin/unipept

@@ -2,7 +2,7 @@
 require_relative '../lib/commands'
 
 # Prevent broken pipe errors
-Signal.trap('PIPE', 'EXIT')
-Signal.trap('INT', 'EXIT')
+Signal.trap('PIPE', 'EXIT') if Signal.list.include? 'PIPE'
+Signal.trap('INT', 'EXIT') if Signal.list.include? 'INT'
 
 Unipept::Commands::Unipept.run(ARGV)

data/bin/uniprot

@@ -1,7 +1,7 @@
 #!/usr/bin/env ruby
 require_relative '../lib/commands'
 
-Signal.trap('PIPE', 'EXIT')
-Signal.trap('INT', 'EXIT')
+Signal.trap('PIPE', 'EXIT') if Signal.list.include? 'PIPE'
+Signal.trap('INT', 'EXIT') if Signal.list.include? 'INT'
 
 Unipept::Commands::Uniprot.run(ARGV)

data/unipept.gemspec

@@ -2,16 +2,16 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: unipept 1.1.1 ruby lib
+# stub: unipept 1.1.2 ruby lib
 
 Gem::Specification.new do |s|
   s.name = "unipept"
-  s.version = "1.1.1"
+  s.version = "1.1.2"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib"]
   s.authors = ["Toon Willems", "Bart Mesuere", "Tom Naessens"]
-  s.date = "2016-06-12"
+  s.date = "2017-01-17"
   s.description = "  Command line interface to the Unipept (http://unipept.ugent.be) web services\n  (pept2lca, taxa2lca, pept2taxa, pept2prot and taxonomy) and some utility\n  commands for handling proteins using the command line.\n"
   s.email = "unipept@ugent.be"
   s.executables = ["unipept", "prot2pept", "peptfilter", "uniprot"]
@@ -76,7 +76,7 @@ Gem::Specification.new do |s|
   ]
   s.homepage = "http://unipept.ugent.be"
   s.licenses = ["MIT"]
-  s.required_ruby_version = Gem::Requirement.new(">= 1.9.3")
+  s.required_ruby_version = Gem::Requirement.new(">= 2.0.0")
   s.rubygems_version = "2.4.8"
   s.summary = "Command line interface to Unipept web services."
 

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: unipept
 version: !ruby/object:Gem::Version
-  version: 1.1.1
+  version: 1.1.2
 platform: ruby
 authors:
 - Toon Willems
@@ -10,7 +10,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-06-12 00:00:00.000000000 Z
+date: 2017-01-17 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: cri
@@ -190,7 +190,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="
     - !ruby/object:Gem::Version
-      version: 1.9.3
+      version: 2.0.0
 required_rubygems_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="