umlaut 3.0.0alpha1

data/lib/service_adaptors/sfx-new.rb

@@ -0,0 +1,557 @@
+# NOTE: In your SFX Admin, under Menu Configuration / API, you should enable ALL
+# 'extra' API information for full umlaut functionality.
+# With the exception of "Include openURL parameter", can't figure out how
+# that's useful. 
+#
+# config parameters in services.yml
+# display name: User displayable name for this service
+# base_url: SFX base url. 
+# click_passthrough: DEPRECATED. Caused problems. Use the SFXBackchannelRecord
+#     link filter service instead. 
+#     When set to true, Umlaut will send all SFX clicks
+#     through SFX, for SFX to capture statistics. This is currently done
+#     using a backdoor into the SFX sfxresolve.cgi script. Defaults to false. 
+#     Note that
+#     after SFX requests have been removed in the nightly job, the
+#     click passthrough will cause an error! Set sfx_requests_expire_crontab
+#     with the crontab pattern you use for requests to expire, and we won't
+#     try to click passthrough with expired requests.
+# sfx_requests_expire_crontab:  Crontab pattern that the SFX admin is using
+#     to expire SFX requests. Used to refrain from click passthrough with
+#     expired requests, since that is destined to fail. 
+# services_of_interest: Optional. over-ride the built in list of what types of 
+#     SFX services we want to grab, and what the corresponding umlaut types are.
+#     hash, with SFX service type name as key, and Umlaut ServiceTypeValue
+#     name as value. 
+# extra_targets_of_interest: sfx target_names of targets you want to make
+#     sure to include in umlaut. A hash with target_name as key, and umlaut
+#     ResponseTypeValue name as value.
+# really_distant_relationships: An array of relationship type codes from SFX 
+#     "related objects".  See Table 18 in SFX 3.0 User's Manual. Related
+#     objects that have only a "really distant relationship" will NOT
+#     be shown as fulltext, but will instead be banished to the see also
+#     "highlighted_link" section. You must have display of related objects
+#     turned ON in SFX display admin, to get related objects at all in
+#     Umlaut. NOTE: This parameter has a default value to a certain set of
+#     relationships, set to empty array [] to eliminate defaults. 
+# sfx_timeout: in seconds, for both open/read timeout value for SFX connection.
+#          Defaults to 8.
+class Sfx < Service
+  require 'uri'
+  require 'htmlentities'
+  require 'cgi'
+  require 'nokogiri'
+
+  #require 'open_url'
+
+  required_config_params :base_url
+  
+  def initialize(config)
+
+    # Key is sfx service_type, value is umlaut servicetype string.
+    # These are the SFX service types we will translate to umlaut
+    @services_of_interest = {'getFullTxt'          => 'fulltext',
+                             'getSelectedFullTxt'  => 'fulltext',
+                             'getDocumentDelivery' => 'document_delivery',                         
+                             'getDOI'              => 'highlighted_link',
+                             'getAbstract'         => 'abstract',
+                             'getTOC'              => 'table_of_contents'}
+
+    # Special targets. Key is SFX target_name.
+    # Value is umlaut service type.
+    # These targets will be included even if their sfx service_type doesn't
+    # match our services_of_interest, and the umlaut service ID string given
+    # here will take precedence and be used even if these targets DO match
+    # services_of_interest. Generally loaded from yml config in super.    
+    @extra_targets_of_interest = {}
+
+    @sfx_timeout = 8
+
+    @really_distant_relationships = ["CONTINUES_IN_PART", "CONTINUED_IN_PART_BY", "ABSORBED_IN_PART", "ABSORBED_BY"]
+                                  
+    super(config)                              
+  end
+
+  # Standard method, used by auto background updater. See Service docs. 
+  def service_types_generated
+    service_strings = []
+    service_strings.concat( @services_of_interest.values() )
+    service_strings.concat( @extra_targets_of_interest.values() )
+    service_strings.uniq!
+
+    return service_strings.collect { |s| ServiceTypeValue[s] }
+  end
+
+  def base_url
+    return @base_url
+  end
+  
+  def handle(request)
+    client = self.initialize_client(request)
+    begin
+      response = self.do_request(client)
+      self.parse_response(response, request)
+      return request.dispatched(self, true)
+    rescue Errno::ETIMEDOUT, Timeout::Error => e
+      # Request to SFX timed out. Record this as unsuccessful in the dispatch table. Temporary.
+      return request.dispatched(self, DispatchedService::FailedTemporary, e)
+    end
+  end
+  
+  def initialize_client(request)
+    transport = OpenURL::Transport.new(@base_url, nil, :open_timeout => @sfx_timeout, :read_timeout => @sfx_timeout)
+    
+    context_object = request.to_context_object
+    transport.add_context_object(context_object)
+    transport.extra_args["sfx.response_type"]="multi_obj_xml"
+      
+    @get_coverage = false    
+    
+    metadata = request.referent.metadata    
+    if ( metadata['date'].blank? &&
+         metadata['year'].blank? &&
+         (! request.referent.identifiers.find {|i| i =~ /^info\:(doi|pmid)/})
+        )
+      # No article-level metadata, do some special stuff. 
+      transport.extra_args["sfx.ignore_date_threshold"]="1"
+      transport.extra_args["sfx.show_availability"]="1"
+      @get_coverage = true
+    end
+    # Workaround to SFX bug, not sure if this is really still neccesary
+    # I think it's not, but leave it in anyway just in case. 
+    if (context_object.referent.identifiers.find {|i| i =~ /^info:doi\// })
+      transport.extra_args['sfx.doi_url']='http://dx.doi.org'
+    end
+    
+    return transport
+  end
+  
+  def do_request(client)
+    client.transport_inline    
+    return client.response
+  end
+  
+  def parse_response(resolver_response, request)
+    doc = Nokogiri::XML(resolver_response)     
+
+    # Catch an SFX error message (in HTML) that's not an XML
+    # document at all.
+    unless doc.at('/ctx_obj_set')
+      Rails.logger.error("sfx.rb: SFX did not return expected response. SFX response: #{resolver_response}")
+      raise "SFX did not return expected response."
+    end
+
+    # There can be several context objects in the response.
+    # We need to keep track of which data comes from which, for
+    # SFX click-through generating et alia
+    sfx_objs = doc.search('/ctx_obj_set/ctx_obj')
+
+    # As we go through the possibly multiple SFX context objects,
+    # we need to keep track of which one, if any, we want to use
+    # to enhance the Umlaut referent metadata.
+    #
+    # We only enhance for journal type metadata. For book type
+    # metadata SFX will return something, but it may not be the manifestation
+    # we want. With journal titles, less of an issue. 
+    #
+    # In case of multiple SFX hits, enhance metadata only from the
+    # one that actually had fulltext. If more than one had fulltext, forget it,
+    # too error prone. If none had full text, just pick the first. 
+    #
+    # We'll use these variables to keep track of our 'best fit' as
+    # we loop through em.     
+    best_fulltext_ctx = nil
+    best_nofulltext_ctx = nil
+
+    # We're going to keep our @really_distant_relationship stuff here. 
+    related_titles = {}
+    
+    0.upto(sfx_objs.length - 1 ) do |sfx_obj_index|
+    
+      sfx_obj = sfx_objs[sfx_obj_index]
+
+      # Get out the "perl_data" section, with our actual OpenURL style
+      # context object information. This was XML escaped as a String (actually
+      # double-escaped, weirdly), so
+      # we need to extract the string, unescape it, and then feed it to Nokogiri
+      # again. 
+      ctx_obj_atts = 
+         CGI.unescapeHTML( sfx_obj.at('./ctx_obj_attributes').inner_html)
+
+      perl_data = Nokogiri::XML( ctx_obj_atts )
+      # parse it into an OpenURL, we might need it like that. 
+      sfx_co = Sfx.parse_perl_data(perl_data)
+      sfx_metadata = sfx_co.to_hash 
+
+      
+      # get SFX objectID
+      object_id_node =
+        perl_data.at("./perldata/hash/item[@key='rft.object_id']")
+      object_id = object_id_node ? object_id_node.inner_html : nil
+
+      # Get SFX requestID
+       request_id_node = 
+         perl_data.at("./perldata/hash/item[@key='sfx.request_id']")
+       request_id = request_id_node ? request_id_node.inner_html : nil
+      
+      # Get targets service ids
+      sfx_target_service_ids =
+        sfx_obj.search('ctx_obj_targets/target/target_service_id').collect {|e| e.inner_html}
+
+
+      
+      metadata = request.referent.metadata
+      
+      # For each target delivered by SFX
+      sfx_obj.search("./ctx_obj_targets/target").each_with_index do|target, target_index|  
+        response_data = {}
+  
+        # First check @extra_targets_of_interest
+        sfx_target_name = target.at('./target_name').inner_html
+        umlaut_service = @extra_targets_of_interest[sfx_target_name]
+  
+        # If not found, look for it in services_of_interest
+        unless ( umlaut_service )
+          sfx_service_type = target.at("./service_type").inner_html
+          umlaut_service = @services_of_interest[sfx_service_type]
+        end
+
+        # If we have multiple context objs, skip the ill and ask-a-librarian
+        # links for all but the first, to avoid dups. This is a bit messy,
+        # but this whole multiple hits thing is messy.
+        if ( sfx_obj_index > 0 &&
+             ( umlaut_service == 'document_delivery' || 
+               umlaut_service == 'export_citation' || 
+               umlaut_service == 'help'))
+            next
+        end
+        
+        
+        # Okay, keep track of best fit ctx for metadata enhancement
+        if request.referent.format == "journal"
+          if ( umlaut_service == 'fulltext')
+            best_fulltext_ctx = perl_data
+            best_nofulltext_ctx = nil
+          elsif best_nofulltext_ctx == nil
+            best_nofulltext_ctx = perl_data
+          end
+        end
+        
+        if ( umlaut_service ) # Okay, it's in services or targets of interest
+          if (target/"./displayer")
+            source = "SFX/"+(target/"./displayer").inner_html
+          else
+            source = "SFX"+URI.parse(self.url).path
+          end
+  
+          target_service_id = (target/"./target_service_id").inner_html
+          
+          coverage = nil
+          if ( @get_coverage )
+            # Make sure you turn on "Include availability info in text format"
+            # in the SFX Admin API configuration.             
+            thresholds_str = ""
+            target.search('coverage/coverage_text/threshold_text/coverage_statement').each do | threshold |
+              thresholds_str += threshold.inner_html.to_s + ".\n";              
+            end
+
+            embargoes_str = "";
+            target.search('coverage/coverage_text/embargo_text/embargo_statement').each do |embargo |
+              embargoes_str += embargo.inner_html.to_s + ".\n";
+            end
+            
+            unless ( thresholds_str.blank? && embargoes_str.blank? )
+              coverage = thresholds_str + embargoes_str
+            end
+          end
+
+
+          related_note = ""
+          # If this is from a related object, add that on as a note too...
+          # And maybe skip this entirely! 
+          if (related_node = target.at('./related_service_info'))
+            relationship = related_node.at('./relation_type').inner_text
+            issn = related_node.at('./related_object_issn').inner_text
+            sfx_object_id = related_node.at('./related_object_id').inner_text
+            title = related_node.at('./related_object_title').inner_text
+            
+            if @really_distant_relationships.include?(
+              related_node.at('./relation_type').inner_text)
+              # Show title-level link in see-also instead of full text.
+              related_titles[issn] = {
+                :sfx_object_id => sfx_object_id,
+                :title => title,
+                :relationship => relationship,
+                :issn => issn
+              }
+              
+              next
+            end
+            
+            related_note = "This version provided from related title:  <i>" + CGI.unescapeHTML( title ) + "</i>.\n"
+          end
+  
+          if ( sfx_service_type == 'getDocumentDelivery' )
+            value_string = request_id
+          else
+            value_string = (target/"./target_service_id").inner_html          
+          end
+  
+          response_data[:url] = CGI.unescapeHTML((target/"./target_url").inner_html)
+          response_data[:notes] = related_note.to_s + CGI.unescapeHTML((target/"./note").inner_html)
+          response_data[:authentication] = CGI.unescapeHTML((target/"./authentication").inner_html)
+          response_data[:source] = source
+          response_data[:coverage] = coverage if coverage
+  
+          # Sfx metadata we want
+          response_data[:sfx_base_url] = @base_url
+          response_data[:sfx_obj_index] = sfx_obj_index + 1 # sfx is 1 indexed
+          response_data[:sfx_target_index] = target_index + 1 
+          response_data[:sfx_request_id] = (perl_data/"//hash/item[@key='sfx.request_id']").first.inner_html
+          response_data[:sfx_target_service_id] = target_service_id
+          response_data[:sfx_target_name] = sfx_target_name
+          # At url-generation time, the request isn't available to us anymore,
+          # so we better store this citation info here now, since we need it
+          # for sfx click passthrough
+          
+          # Oops, need to take this from SFX delivered metadata.
+          
+          response_data[:citation_year] = sfx_metadata['rft.date'].to_s[0,4] if sfx_metadata['rft.date'] 
+          response_data[:citation_volume] = sfx_metadata['rft.volume'];
+          response_data[:citation_issue] = sfx_metadata['rft.issue']
+          response_data[:citation_spage] = sfx_metadata['rft.spage']
+
+          # Some debug info
+          response_data[:debug_info] =" Target: #{sfx_target_name} ; SFX object ID: #{object_id}"
+          
+          response_data[:display_text] = (target/"./target_public_name").inner_html
+    
+          request.add_service_response(
+            response_data.merge(
+              :service => self,              
+              :service_type_value => umlaut_service
+           ))
+            
+              
+                              
+        end
+      end
+    end
+
+    # Add in links to our related titles
+    related_titles.each_pair do |issn, hash|
+      request.add_service_response(        
+         :service => self,
+         :display_text => "#{sfx_relationship_display(hash[:relationship])}: #{hash[:title]}",
+         :notes => "#{ServiceTypeValue['fulltext'].display_name} available",
+         :related_object_hash => hash, 
+         :service_type_value => "highlighted_link")
+    end
+    
+    # Did we find a ctx best fit for enhancement?
+    if best_fulltext_ctx
+      enhance_referent(request, best_fulltext_ctx)
+    elsif best_nofulltext_ctx
+      enhance_referent(request, best_nofulltext_ctx)
+    end
+    
+  end
+
+   
+  def sfx_click_passthrough
+    # From config, or default to false. 
+    return @click_passthrough  || false;
+  end
+
+  # Using the value of sfx_request_expire_crontab, determine if the
+  # umlaut service response is so old that we can't use it for
+  # sfx click passthrough anymore. 
+  def expired_sfx_request(response)
+    require 'CronTab'
+
+    crontab_str = @sfx_requests_expire_crontab
+
+    return false unless crontab_str # no param, no determination possible
+    
+    crontab = CronTab.new( crontab_str )
+
+    time_of_response = response.created_at
+
+    return false unless time_of_response # no recorded time, not possible either
+
+    expire_time = crontab.nexttime( time_of_response )
+
+    # Give an extra five minutes of time, in case the expire
+    # process takes up to five minutes to finish. 
+    return( Time.now > (expire_time + 5.minutes) )    
+  end
+
+  # Try to provide a weird reverse-engineered url to take the user THROUGH
+  # sfx to their destination, so sfx will capture for statistics.
+  # This relies on certain information from the orignal sfx response
+  # being stored in the Response object at that point. Used by
+  # sfx_backchannel_record service. 
+  def self.pass_through_url(response)
+    base_url = response[:sfx_base_url]    
+    
+    sfx_resolver_cgi_url =  base_url + "/cgi/core/sfxresolver.cgi"      
+
+    
+    dataString = "?tmp_ctx_svc_id=#{response[:sfx_target_index]}"
+    dataString += "&tmp_ctx_obj_id=#{response[:sfx_obj_index]}"
+
+    # Don't understand what this is, but it sometimes needs to be 1?
+    # Hopefully it won't mess anything up when it's not neccesary.
+    # Really have no idea when it would need to be something other
+    # than 1.
+    # Nope, sad to say it does mess up cases where it is not neccesary.
+    # Grr. 
+    #dataString += "&tmp_parent_ctx_obj_id=1"
+    
+    dataString += "&service_id=#{response[:sfx_target_service_id]}"
+    dataString += "&request_id=#{response[:sfx_request_id]}"
+    dataString += "&rft.year="
+    dataString += URI.escape(response[:citation_year].to_s) if response[:citation_year]
+    dataString += "&rft.volume="
+    dataString += URI.escape(response[:citation_volume].to_s) if response[:citation_volume]
+    dataString += "&rft.issue="
+    dataString += URI.escape(response[:citation_issue].to_s) if response[:citation_issue]
+    dataString += "&rft.spage="
+    dataString += URI.escape(response[:citation_spage]).to_s if response[:citation_spage]
+    
+      return sfx_resolver_cgi_url + dataString       
+  end
+
+  # Class method to parse a perl_data block as XML in String
+  # into a ContextObject. Argument is Nokogiri doc containing
+  # the SFX <perldata> element and children. 
+  def self.parse_perl_data(doc)        
+
+    co = OpenURL::ContextObject.new
+    co.referent.set_format('journal') # default
+
+    html_ent_coder = HTMLEntities.new 
+    
+    doc.search('perldata/hash/item').each do |item|
+      key = item['key'].to_s
+      value = item.inner_html
+      # But this still has HTML entities in it sometimes. Now we've
+      # got to decode THAT.
+      value = html_ent_coder.decode(value)
+
+      # Some normalization. SFX uses rft.year, which is not actually
+      # legal. Stick it in rft.date instead.
+      key = "rft.date" if key == "rft.year"
+
+      prefix, stripped = key.split('.')
+            
+      # The auinit1 value is COMPLETELY messed up for reasons I do not know.
+      # Double encoded in bizarre ways.
+      next if key == '@rft.auinit1' || key == '@rft.auinit'
+
+
+
+      
+      # Darn multi-value SFX hackery, indicated with keys beginning
+      # with '@'. Just take the first one,
+      # our context object can't store more than one. Then regularize the
+      # key name. 
+      if (prefix == '@rft')
+        array_items = item.search("array/item")
+        array_i = array_items[0] unless array_items.blank?
+        
+        prefix = prefix.slice(1, prefix.length)
+        value = array_i ? array_i.inner_html : nil   
+      end
+
+      # object_type? Fix that to be the right way.
+      if (prefix=='rft') && (key=='object_type')
+        co.referent.set_format( value.downcase )
+        next
+      end
+      
+      if (prefix == 'rft' && value)
+          co.referent.set_metadata(stripped, value)
+      end
+
+      if (prefix=='@rft_id')
+          identifiers = item.search('array/item')
+          identifiers.each do |id|
+            co.referent.add_identifier(id.inner_html)
+          end
+      end
+      if (prefix=='@rfr_id')
+          identifiers = item.search('array/item')
+          identifiers.each do |id|
+            co.referrer.add_identifier(id.inner_html)
+          end
+      end
+    end
+    return co
+  end
+
+  # Custom url generation for the weird case 
+  def response_url(service_response, submitted_params)
+    if (related_object =  service_response.data_values[:related_object_hash])
+      {:controller => 'resolve', "rft.issn" => related_object[:issn], "rft.title" => related_object[:title], "rft.object_id" => related_object[:sfx_object_id] }
+    else
+      service_response['url']
+    end        
+  end
+  
+  protected
+  # Second argument is a Nokogiri element representing the <perldata>
+  # tag and children. 
+  def enhance_referent(request, perl_data)
+    ActiveRecord::Base.connection_pool.with_connection do
+      metadata = request.referent.metadata
+  
+      sfx_co = Sfx.parse_perl_data(perl_data)
+      
+      sfx_metadata = sfx_co.referent.metadata
+      # Do NOT enhance for metadata type 'BOOK', unreliable matching from
+      # SFX!
+      return if sfx_metadata["object_type"] == "BOOK" || sfx_metadata["genre"] == "book"
+      
+      # If we already had metadata for journal title and the SFX one
+      # differs, we want to over-write it. This is good for ambiguous
+      # incoming OpenURLs, among other things.
+      
+      if request.referent.format == 'journal'
+          request.referent.enhance_referent("jtitle", sfx_metadata['jtitle'])
+      end
+      # And ISSN
+      if request.referent.format == 'journal' && ! sfx_metadata['issn'].blank?
+        request.referent.enhance_referent('issn', sfx_metadata['issn'])
+      end
+  
+  
+      # The rest,  we write only if blank, we don't over-write
+      sfx_metadata.each do |key, value|
+        if (metadata[key].blank?)
+          
+          # watch out for SFX's weird array values. 
+            request.referent.enhance_referent(key, value)
+        end
+      end
+    end                        
+  end
+
+
+  
+  # From Table 18 in SFX General User's Guide 3.0. 
+  def sfx_relationship_display(sfx_code)
+    sfx_code = sfx_code.to_s
+    # Most can simply be #humanized, a couple of over-rides
+    @sfx_relationship_display ||= {
+      "TRANSLATION_ENTRY" => "Translation",          
+    }
+
+    display = @sfx_relationship_display[sfx_code]
+    display = sfx_code.humanize if display.nil?
+
+    return display
+  end
+  
+  end
+