uc3-dmp-id 0.1.59 → 0.1.61
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- checksums.yaml +4 -4
- data/lib/uc3-dmp-id/finder.rb +51 -61
- data/lib/uc3-dmp-id/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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data.tar.gz:
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3
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+
metadata.gz: bb07288c4e1b21217a2ca9ed4df6a8c7243968c2cea3dbd0474796b6399d2a09
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4
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data.tar.gz: 665c7eb28c3fd99e73c50f06b9bd95be7f96bb95b0a0c551634c6b5c941fd9db
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5
5
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SHA512:
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6
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metadata.gz:
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7
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data.tar.gz:
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6
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metadata.gz: 8f196c1f061e5fcbd9085f5d483936797b3fe97bdb3e74b9bb8e2fc83effdefc4ecffbb28a0f0b478418fff6e8b6edd21b35cb2e103e6d7db1696e33e94d9d2f
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7
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data.tar.gz: b4adad6f533baff187391f415123134b93ffc0c01a93771f6519d8e935f91966c32c0d2ff2c051a98b09a596a615c86226b1f7ba6eeda72092b34b127edac403
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data/lib/uc3-dmp-id/finder.rb
CHANGED
@@ -17,19 +17,36 @@ module Uc3DmpId
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MSG_MISSING_PROV_ID = 'No Provenance identifier was provided. \
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Expected: `{ "dmp_id": { "identifier": "value", "type": "value" }`'
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ORCID_DOMAIN = 'orcid.org'
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ROR_DOMAIN = 'ror.org'
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ORCID_DOMAIN = 'https://orcid.org/'
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ROR_DOMAIN = 'https://ror.org/'
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class << self
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# TODO: Replace this with ElasticSearch
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def search_dmps(args:, logger: nil)
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# Fetch the DMPs for each of the possible filter options
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client = Uc3DmpDynamo::Client.new(table: ENV['DYNAMO_INDEX_TABLE'])
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-
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-
return _by_featured(client:, logger:) if args.fetch('featured', 'false').to_s.downcase == 'true'
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owner = args['owner']
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org = args['org']
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funder = args['funder']
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-
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owner_pks = owner.nil? ? [] : _by_owner(owner: owner, client:, logger:)
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33
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org_pks = org.nil? ? [] : _by_org(org: org, client:, logger:)
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34
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funder_pks = funder.nil? ? [] : _by_funder(funder: funder, client:, logger:)
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35
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return [] if owner_pks.empty? && org_pks.empty? && funder_pks.empty?
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36
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# Only use the DMPs that fit all of the filter criteria
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dmps = owner_pks & org_pks & funder_pks
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return [] if dmps.nil? || dmps.empty?
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40
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# Perfom search operations
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# Handle sort
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# Handle pagination
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# Fetch full DMP records
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client = Uc3DmpDynamo::Client.new(table: ENV['DYNAMO_TABLE'])
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_fetch_dmps(client:, pks: dmps.map { |dmp| dmp['pk'] }, logger:)
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end
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51
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# Find a DMP based on the contents of the incoming JSON
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@@ -133,73 +150,41 @@ module Uc3DmpId
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133
150
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# Fetch the DMP IDs for the specified person's ORCID (or email)
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def _by_owner(owner:, client: nil, logger: nil)
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136
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-
orcid_regex = /^([0-
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153
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orcid_regex = /^([0-9a-zA-Z]{4}-){3}[0-9a-zA-Z]{4}$/
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email_regex = /^[^\s@]+@[^\s@]+\.[^\s@]+$/
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-
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-
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"https://#{ORCID_DOMAIN}/#{owner}"
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-
]
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}
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}
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elsif !email.nil?
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args = {
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filter_expression: 'contains(people, :email) AND SK = :sk',
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expression_attribute_values: { ':sk': 'METADATA', ':email': [email.gsub('%40', '@')] }
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}
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else
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# It wasn't an email or ORCID, so return an empty array
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return []
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end
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logger&.debug(message: 'Fetch relevant DMPs _by_owner - scan args', details: args)
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client = Uc3DmpDynamo::Client.new if client.nil?
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_process_search_response(response: client.scan(args:))
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orcid = owner.to_s.strip
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return [] if (orcid =~ orcid_regex).nil? && (orcid =~ email_regex).nil?
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orcid = "#{ORCID_DOMAIN}#{orcid}" unless (orcid =~ orcid_regex).nil?
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resp = client.get_item(key: { PK: 'PERSON_INDEX', SK: orcid }, logger:)
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return [] unless resp.is_a?(Hash)
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logger&.debug(message: "DMPs for PERSON #{orcid}", details: resp)
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resp.fetch('dmps', [])
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end
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# Fetch the DMP IDs for the specified organization/institution
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def _by_org(org:, client: nil, logger: nil)
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regex = /^[a-zA-Z0-9]+$/
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ror = org.strip unless (org.to_s =~ regex).nil?
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ror = "#{ROR_DOMAIN}/#{org.strip}" unless (org.to_s =~ regex).nil?
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-
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"http://#{ROR_DOMAIN}/#{ror}",
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"https://#{ROR_DOMAIN}/#{ror}"
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]
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}
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}
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logger&.debug(message: 'Fetch relevant DMPs _by_org - scan args', details: args)
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client = Uc3DmpDynamo::Client.new if client.nil?
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_process_search_response(response: client.scan(args:))
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resp = client.get_item(key: { PK: 'AFFILIATION_INDEX', SK: ror }, logger:)
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return [] unless resp.is_a?(Hash)
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logger&.debug(message: "DMPs for AFFILIATION #{ror}", details: resp)
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resp.fetch('dmps', [])
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end
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# Fetch the DMP IDs for the specified funder
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def _by_funder(funder:, client: nil, logger: nil)
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regex = /^[a-zA-Z0-9]+$/
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ror = funder.strip unless (funder.to_s =~ regex).nil?
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ror = "#{ROR_DOMAIN}/#{funder.strip}" unless (funder.to_s =~ regex).nil?
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"http://#{ROR_DOMAIN}/#{ror}",
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"https://#{ROR_DOMAIN}/#{ror}"
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]
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}
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}
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logger&.debug(message: 'Fetch relevant DMPs _by_funder - scan args', details: args)
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client = Uc3DmpDynamo::Client.new if client.nil?
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_process_search_response(response: client.scan(args:))
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resp = client.get_item(key: { PK: 'FUNDER_INDEX', SK: ror }, logger:)
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return [] unless resp.is_a?(Hash)
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logger&.debug(message: "DMPs for FUNDER #{ror}", details: resp)
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resp.fetch('dmps', [])
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end
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# Fetch the DMP IDs that are marked as featured
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@@ -224,6 +209,11 @@ module Uc3DmpId
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_process_search_response(response: client.scan(args:))
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end
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# Fetches all of the DMPs by their PKs
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def _fetch_dmps(client:, pks:, logger: null)
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end
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# Transform the search results so that we do not include any of the DMPHub specific metadata
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def _process_search_response(response:)
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return [] unless response.is_a?(Array) && response.any?
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data/lib/uc3-dmp-id/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
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|
1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: uc3-dmp-id
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3
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version: !ruby/object:Gem::Version
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version: 0.1.
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version: 0.1.61
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platform: ruby
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authors:
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- Brian Riley
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2024-07-
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date: 2024-07-11 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: json
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