twenty3andme 0.0.1
Sign up to get free protection for your applications and to get access to all the features.
- data/.document +5 -0
- data/.rspec +1 -0
- data/Gemfile +13 -0
- data/Gemfile.lock +69 -0
- data/LICENSE.txt +20 -0
- data/README.rdoc +56 -0
- data/Rakefile +49 -0
- data/VERSION +1 -0
- data/config/routes.rb +3 -0
- data/lib/twenty3andme/callback_handler.rb +8 -0
- data/lib/twenty3andme/callback_listener.rb +19 -0
- data/lib/twenty3andme/client.rb +61 -0
- data/lib/twenty3andme/engine.rb +12 -0
- data/lib/twenty3andme/helpers.rb +7 -0
- data/lib/twenty3andme.rb +11 -0
- data/spec/callback_listener_spec.rb +18 -0
- data/spec/spec_helper.rb +13 -0
- data/spec/twenty3andme_spec.rb +15 -0
- data/twenty3andme.gemspec +79 -0
- metadata +198 -0
data/.document
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data/.rspec
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--color
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data/Gemfile
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data/Gemfile.lock
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GEM
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remote: http://rubygems.org/
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specs:
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activesupport (3.2.10)
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i18n (~> 0.6)
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multi_json (~> 1.0)
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backports (2.6.5)
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builder (3.1.4)
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descendants_tracker (0.0.1)
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diff-lcs (1.1.3)
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git (1.2.5)
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grape (0.2.3)
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activesupport
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builder
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hashie (~> 1.2)
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multi_json (>= 1.3.2)
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multi_xml
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rack
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rack-accept
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rack-mount
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virtus
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hashie (1.2.0)
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httparty (0.8.1)
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multi_json
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multi_xml
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i18n (0.6.1)
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jeweler (1.8.4)
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bundler (~> 1.0)
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git (>= 1.2.5)
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rake
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rdoc
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json (1.7.6)
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multi_json (1.5.0)
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multi_xml (0.5.1)
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rack (1.4.1)
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rack-accept (0.4.5)
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rack (>= 0.4)
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rack-mount (0.8.3)
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rack (>= 1.0.0)
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rack-test (0.6.2)
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rack (>= 1.0)
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rake (10.0.3)
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rdoc (3.12)
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json (~> 1.4)
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rspec (2.8.0)
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rspec-core (~> 2.8.0)
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rspec-expectations (~> 2.8.0)
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rspec-mocks (~> 2.8.0)
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rspec-core (2.8.0)
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rspec-expectations (2.8.0)
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diff-lcs (~> 1.1.2)
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rspec-mocks (2.8.0)
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virtus (0.5.4)
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backports (~> 2.6.1)
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descendants_tracker (~> 0.0.1)
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wirble (0.1.3)
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PLATFORMS
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ruby
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DEPENDENCIES
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bundler
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grape
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httparty
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jeweler (~> 1.8.4)
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rack-test
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rdoc (~> 3.12)
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rspec (~> 2.8.0)
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wirble
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data/LICENSE.txt
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Copyright (c) 2013 Ian Morgan
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Permission is hereby granted, free of charge, to any person obtaining
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a copy of this software and associated documentation files (the
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"Software"), to deal in the Software without restriction, including
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without limitation the rights to use, copy, modify, merge, publish,
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distribute, sublicense, and/or sell copies of the Software, and to
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permit persons to whom the Software is furnished to do so, subject to
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the following conditions:
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The above copyright notice and this permission notice shall be
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included in all copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
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MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
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LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
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OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
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WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
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data/README.rdoc
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= twenty3andme
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Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe.
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https://api.23andme.com/
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== Install
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Bundler via Gemfile
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gem 'twenty3andme'
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== Use with Rails
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Use environment variables to configure:
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CLIENT_ID=shdfkjhsdfkj23
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CLIENT_SECRET=sadiuyf79238
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REDIRECT_URI=http://localhost:5000/callback_listener/
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AFTER_REDIRECT_URI=/
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SCOPE=basic,rs3094315
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Send user to authorize app with 23andme, A URL helper is provided to help with this (url_for_23andme_authorize):
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link_to 'authorize', url_for_23andme_authorize
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Then implement CallbackHandler#handle to use or store token and redirect user. Example:
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module Twenty3AndMe
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class CallbackHandler
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def handle(token, refresh_token)
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User.create(:token => token, :refresh_token => refresh_token)
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end
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end
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end
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Now requests can be made with the stored token:
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user = User.first
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client = Twenty3AndMe::Client.new
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client.token = user.token
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client.genotype('rs3094315')
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== Use without Rails
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First, Authorize and receive the code from 23andme: https://api.23andme.com/authorize/?redirect_uri=http://localhost:5000/receive_code/&response_type=code&client_id=a8a1f21d3417b70de786daea7e9ce2a8&scope=ancestry
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c = Twenty3AndMe::Client.new
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c.request_token('client_id', 'client_secret', 'code_from_above', 'http://localhost:5000/receive_code/', ['ancestry', 'basic', 'rs4778241'])
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Requests can now be made
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c.user
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data/Rakefile
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# encoding: utf-8
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require 'rubygems'
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require 'bundler'
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begin
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Bundler.setup(:default, :development)
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rescue Bundler::BundlerError => e
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$stderr.puts e.message
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$stderr.puts "Run `bundle install` to install missing gems"
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exit e.status_code
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end
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require 'rake'
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require 'jeweler'
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Jeweler::Tasks.new do |gem|
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# gem is a Gem::Specification... see http://docs.rubygems.org/read/chapter/20 for more options
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gem.name = "twenty3andme"
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gem.homepage = "http://github.com/seeingidog/twenty3andme"
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gem.license = "MIT"
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gem.summary = %Q{23AndMe API client and Rails engine}
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gem.description = %Q{Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe}
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gem.email = "ian@ruby-code.com"
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gem.authors = ["Ian Morgan"]
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# dependencies defined in Gemfile
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end
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Jeweler::RubygemsDotOrgTasks.new
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require 'rspec/core'
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require 'rspec/core/rake_task'
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RSpec::Core::RakeTask.new(:spec) do |spec|
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spec.pattern = FileList['spec/**/*_spec.rb']
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end
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RSpec::Core::RakeTask.new(:rcov) do |spec|
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spec.pattern = 'spec/**/*_spec.rb'
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spec.rcov = true
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end
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task :default => :spec
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require 'rdoc/task'
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Rake::RDocTask.new do |rdoc|
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version = File.exist?('VERSION') ? File.read('VERSION') : ""
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rdoc.rdoc_dir = 'rdoc'
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rdoc.title = "twenty3andme #{version}"
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rdoc.rdoc_files.include('README*')
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rdoc.rdoc_files.include('lib/**/*.rb')
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end
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data/VERSION
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1
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0.0.1
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data/config/routes.rb
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module Twenty3AndMe
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class CallbackListener < Grape::API
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resources do
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get do
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code = params.code
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client = Client.new
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client.request_token(ENV['CLIENT_ID'], ENV['CLIENT_SECRET'], code, ENV['REDIRECT_URI'], ENV['SCOPE'].split(','))
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handler = Twenty3AndMe::CallbackHandler.new
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handler.handle(client.token, client.refresh_token)
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status 302
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header 'Location', ENV['AFTER_REDIRECT_URI']
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end
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end
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end
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end
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module Twenty3AndMe
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class Client
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include HTTParty
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base_uri 'api.23andme.com'
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VERSION = '/1'
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attr_accessor :token
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attr_accessor :refresh_token
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def get(path)
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options = { :headers => {"Authorization" => "Bearer #{@token}"} }
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fullpath = URI.escape(VERSION + path)
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self.class.get(fullpath, options).parsed_response
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end
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def request_token(client_id, client_secret, code, redirect_uri, scope)
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scope_uri = Array(scope).join(" ")
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req_body = {:client_id => client_id, :client_secret => client_secret, :grant_type => 'authorization_code', :code => code, :redirect_uri => redirect_uri, :scope => scope_uri}
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resp = self.class.post("https://api.23andme.com:443/token", :body => req_body)
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@token = resp['access_token']
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@refresh_token = resp['refresh_token']
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end
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#TODO
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def request_refresh_token()
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end
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### Requests
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def user
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get('/user')
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end
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def names
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get('/names')
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end
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def haplogroups
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get('/haplogroups')
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end
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def genotypes(locations)
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locations_uri = Array(locations).join(" ")
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get("/genotypes/?locations=#{locations_uri}")
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end
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|
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def ancestry(threshold)
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get("/ancestry/?threshold=#{threshold.to_f}")
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end
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def relatives
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get("/relatives")
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end
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def genomes(profile_id)
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get("/genomes/#{profile_id}")
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end
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end
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end
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data/lib/twenty3andme.rb
ADDED
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module Twenty3AndMe
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end
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require 'httparty'
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require 'grape'
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require_relative 'twenty3andme/client'
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require_relative 'twenty3andme/callback_listener'
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require_relative 'twenty3andme/callback_handler'
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require_relative 'twenty3andme/helpers'
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require_relative 'twenty3andme/engine' if defined?(Rails)
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require 'spec_helper'
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describe Twenty3AndMe::CallbackListener do
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include Rack::Test::Methods
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def app
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Twenty3AndMe::CallbackListener
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end
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|
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describe Twenty3AndMe::CallbackListener do
|
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describe "GET /?code=adc996063679f1a400aa0e13c54094dc" do
|
12
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it "returns the provided code from 23andme" do
|
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get "/?code=adc996063679f1a400aa0e13c54094dc"
|
14
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last_response.status.should == 200
|
15
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end
|
16
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end
|
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end
|
18
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end
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data/spec/spec_helper.rb
ADDED
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1
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$LOAD_PATH.unshift(File.join(File.dirname(__FILE__), '..', 'lib'))
|
2
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$LOAD_PATH.unshift(File.dirname(__FILE__))
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require 'rspec'
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require 'twenty3andme'
|
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require "rack/test"
|
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# Requires supporting files with custom matchers and macros, etc,
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# in ./support/ and its subdirectories.
|
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Dir["#{File.dirname(__FILE__)}/support/**/*.rb"].each {|f| require f}
|
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|
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RSpec.configure do |config|
|
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|
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end
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# Generated by jeweler
|
2
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# DO NOT EDIT THIS FILE DIRECTLY
|
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# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
|
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# -*- encoding: utf-8 -*-
|
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Gem::Specification.new do |s|
|
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s.name = "twenty3andme"
|
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s.version = "0.0.1"
|
9
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+
|
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
|
11
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s.authors = ["Ian Morgan"]
|
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s.date = "2013-01-06"
|
13
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s.description = "Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe"
|
14
|
+
s.email = "ian@ruby-code.com"
|
15
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s.extra_rdoc_files = [
|
16
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+
"LICENSE.txt",
|
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+
"README.rdoc"
|
18
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+
]
|
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s.files = [
|
20
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".document",
|
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+
".rspec",
|
22
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+
"Gemfile",
|
23
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"Gemfile.lock",
|
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"LICENSE.txt",
|
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"README.rdoc",
|
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"Rakefile",
|
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"VERSION",
|
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"config/routes.rb",
|
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"lib/twenty3andme.rb",
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"lib/twenty3andme/callback_handler.rb",
|
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"lib/twenty3andme/callback_listener.rb",
|
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"lib/twenty3andme/client.rb",
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"lib/twenty3andme/engine.rb",
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|
+
"lib/twenty3andme/helpers.rb",
|
35
|
+
"spec/callback_listener_spec.rb",
|
36
|
+
"spec/spec_helper.rb",
|
37
|
+
"spec/twenty3andme_spec.rb",
|
38
|
+
"twenty3andme.gemspec"
|
39
|
+
]
|
40
|
+
s.homepage = "http://github.com/seeingidog/twenty3andme"
|
41
|
+
s.licenses = ["MIT"]
|
42
|
+
s.require_paths = ["lib"]
|
43
|
+
s.rubygems_version = "1.8.24"
|
44
|
+
s.summary = "23AndMe API client and Rails engine"
|
45
|
+
|
46
|
+
if s.respond_to? :specification_version then
|
47
|
+
s.specification_version = 3
|
48
|
+
|
49
|
+
if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
|
50
|
+
s.add_runtime_dependency(%q<grape>, [">= 0"])
|
51
|
+
s.add_runtime_dependency(%q<httparty>, [">= 0"])
|
52
|
+
s.add_development_dependency(%q<rspec>, ["~> 2.8.0"])
|
53
|
+
s.add_development_dependency(%q<rdoc>, ["~> 3.12"])
|
54
|
+
s.add_development_dependency(%q<bundler>, [">= 0"])
|
55
|
+
s.add_development_dependency(%q<jeweler>, ["~> 1.8.4"])
|
56
|
+
s.add_development_dependency(%q<wirble>, [">= 0"])
|
57
|
+
s.add_development_dependency(%q<rack-test>, [">= 0"])
|
58
|
+
else
|
59
|
+
s.add_dependency(%q<grape>, [">= 0"])
|
60
|
+
s.add_dependency(%q<httparty>, [">= 0"])
|
61
|
+
s.add_dependency(%q<rspec>, ["~> 2.8.0"])
|
62
|
+
s.add_dependency(%q<rdoc>, ["~> 3.12"])
|
63
|
+
s.add_dependency(%q<bundler>, [">= 0"])
|
64
|
+
s.add_dependency(%q<jeweler>, ["~> 1.8.4"])
|
65
|
+
s.add_dependency(%q<wirble>, [">= 0"])
|
66
|
+
s.add_dependency(%q<rack-test>, [">= 0"])
|
67
|
+
end
|
68
|
+
else
|
69
|
+
s.add_dependency(%q<grape>, [">= 0"])
|
70
|
+
s.add_dependency(%q<httparty>, [">= 0"])
|
71
|
+
s.add_dependency(%q<rspec>, ["~> 2.8.0"])
|
72
|
+
s.add_dependency(%q<rdoc>, ["~> 3.12"])
|
73
|
+
s.add_dependency(%q<bundler>, [">= 0"])
|
74
|
+
s.add_dependency(%q<jeweler>, ["~> 1.8.4"])
|
75
|
+
s.add_dependency(%q<wirble>, [">= 0"])
|
76
|
+
s.add_dependency(%q<rack-test>, [">= 0"])
|
77
|
+
end
|
78
|
+
end
|
79
|
+
|
metadata
ADDED
@@ -0,0 +1,198 @@
|
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
|
+
name: twenty3andme
|
3
|
+
version: !ruby/object:Gem::Version
|
4
|
+
version: 0.0.1
|
5
|
+
prerelease:
|
6
|
+
platform: ruby
|
7
|
+
authors:
|
8
|
+
- Ian Morgan
|
9
|
+
autorequire:
|
10
|
+
bindir: bin
|
11
|
+
cert_chain: []
|
12
|
+
date: 2013-01-06 00:00:00.000000000 Z
|
13
|
+
dependencies:
|
14
|
+
- !ruby/object:Gem::Dependency
|
15
|
+
name: grape
|
16
|
+
requirement: !ruby/object:Gem::Requirement
|
17
|
+
none: false
|
18
|
+
requirements:
|
19
|
+
- - ! '>='
|
20
|
+
- !ruby/object:Gem::Version
|
21
|
+
version: '0'
|
22
|
+
type: :runtime
|
23
|
+
prerelease: false
|
24
|
+
version_requirements: !ruby/object:Gem::Requirement
|
25
|
+
none: false
|
26
|
+
requirements:
|
27
|
+
- - ! '>='
|
28
|
+
- !ruby/object:Gem::Version
|
29
|
+
version: '0'
|
30
|
+
- !ruby/object:Gem::Dependency
|
31
|
+
name: httparty
|
32
|
+
requirement: !ruby/object:Gem::Requirement
|
33
|
+
none: false
|
34
|
+
requirements:
|
35
|
+
- - ! '>='
|
36
|
+
- !ruby/object:Gem::Version
|
37
|
+
version: '0'
|
38
|
+
type: :runtime
|
39
|
+
prerelease: false
|
40
|
+
version_requirements: !ruby/object:Gem::Requirement
|
41
|
+
none: false
|
42
|
+
requirements:
|
43
|
+
- - ! '>='
|
44
|
+
- !ruby/object:Gem::Version
|
45
|
+
version: '0'
|
46
|
+
- !ruby/object:Gem::Dependency
|
47
|
+
name: rspec
|
48
|
+
requirement: !ruby/object:Gem::Requirement
|
49
|
+
none: false
|
50
|
+
requirements:
|
51
|
+
- - ~>
|
52
|
+
- !ruby/object:Gem::Version
|
53
|
+
version: 2.8.0
|
54
|
+
type: :development
|
55
|
+
prerelease: false
|
56
|
+
version_requirements: !ruby/object:Gem::Requirement
|
57
|
+
none: false
|
58
|
+
requirements:
|
59
|
+
- - ~>
|
60
|
+
- !ruby/object:Gem::Version
|
61
|
+
version: 2.8.0
|
62
|
+
- !ruby/object:Gem::Dependency
|
63
|
+
name: rdoc
|
64
|
+
requirement: !ruby/object:Gem::Requirement
|
65
|
+
none: false
|
66
|
+
requirements:
|
67
|
+
- - ~>
|
68
|
+
- !ruby/object:Gem::Version
|
69
|
+
version: '3.12'
|
70
|
+
type: :development
|
71
|
+
prerelease: false
|
72
|
+
version_requirements: !ruby/object:Gem::Requirement
|
73
|
+
none: false
|
74
|
+
requirements:
|
75
|
+
- - ~>
|
76
|
+
- !ruby/object:Gem::Version
|
77
|
+
version: '3.12'
|
78
|
+
- !ruby/object:Gem::Dependency
|
79
|
+
name: bundler
|
80
|
+
requirement: !ruby/object:Gem::Requirement
|
81
|
+
none: false
|
82
|
+
requirements:
|
83
|
+
- - ! '>='
|
84
|
+
- !ruby/object:Gem::Version
|
85
|
+
version: '0'
|
86
|
+
type: :development
|
87
|
+
prerelease: false
|
88
|
+
version_requirements: !ruby/object:Gem::Requirement
|
89
|
+
none: false
|
90
|
+
requirements:
|
91
|
+
- - ! '>='
|
92
|
+
- !ruby/object:Gem::Version
|
93
|
+
version: '0'
|
94
|
+
- !ruby/object:Gem::Dependency
|
95
|
+
name: jeweler
|
96
|
+
requirement: !ruby/object:Gem::Requirement
|
97
|
+
none: false
|
98
|
+
requirements:
|
99
|
+
- - ~>
|
100
|
+
- !ruby/object:Gem::Version
|
101
|
+
version: 1.8.4
|
102
|
+
type: :development
|
103
|
+
prerelease: false
|
104
|
+
version_requirements: !ruby/object:Gem::Requirement
|
105
|
+
none: false
|
106
|
+
requirements:
|
107
|
+
- - ~>
|
108
|
+
- !ruby/object:Gem::Version
|
109
|
+
version: 1.8.4
|
110
|
+
- !ruby/object:Gem::Dependency
|
111
|
+
name: wirble
|
112
|
+
requirement: !ruby/object:Gem::Requirement
|
113
|
+
none: false
|
114
|
+
requirements:
|
115
|
+
- - ! '>='
|
116
|
+
- !ruby/object:Gem::Version
|
117
|
+
version: '0'
|
118
|
+
type: :development
|
119
|
+
prerelease: false
|
120
|
+
version_requirements: !ruby/object:Gem::Requirement
|
121
|
+
none: false
|
122
|
+
requirements:
|
123
|
+
- - ! '>='
|
124
|
+
- !ruby/object:Gem::Version
|
125
|
+
version: '0'
|
126
|
+
- !ruby/object:Gem::Dependency
|
127
|
+
name: rack-test
|
128
|
+
requirement: !ruby/object:Gem::Requirement
|
129
|
+
none: false
|
130
|
+
requirements:
|
131
|
+
- - ! '>='
|
132
|
+
- !ruby/object:Gem::Version
|
133
|
+
version: '0'
|
134
|
+
type: :development
|
135
|
+
prerelease: false
|
136
|
+
version_requirements: !ruby/object:Gem::Requirement
|
137
|
+
none: false
|
138
|
+
requirements:
|
139
|
+
- - ! '>='
|
140
|
+
- !ruby/object:Gem::Version
|
141
|
+
version: '0'
|
142
|
+
description: Ruby API client and Rails engine for creating applications that integrate
|
143
|
+
with data from the personal genetic testing service 23AndMe
|
144
|
+
email: ian@ruby-code.com
|
145
|
+
executables: []
|
146
|
+
extensions: []
|
147
|
+
extra_rdoc_files:
|
148
|
+
- LICENSE.txt
|
149
|
+
- README.rdoc
|
150
|
+
files:
|
151
|
+
- .document
|
152
|
+
- .rspec
|
153
|
+
- Gemfile
|
154
|
+
- Gemfile.lock
|
155
|
+
- LICENSE.txt
|
156
|
+
- README.rdoc
|
157
|
+
- Rakefile
|
158
|
+
- VERSION
|
159
|
+
- config/routes.rb
|
160
|
+
- lib/twenty3andme.rb
|
161
|
+
- lib/twenty3andme/callback_handler.rb
|
162
|
+
- lib/twenty3andme/callback_listener.rb
|
163
|
+
- lib/twenty3andme/client.rb
|
164
|
+
- lib/twenty3andme/engine.rb
|
165
|
+
- lib/twenty3andme/helpers.rb
|
166
|
+
- spec/callback_listener_spec.rb
|
167
|
+
- spec/spec_helper.rb
|
168
|
+
- spec/twenty3andme_spec.rb
|
169
|
+
- twenty3andme.gemspec
|
170
|
+
homepage: http://github.com/seeingidog/twenty3andme
|
171
|
+
licenses:
|
172
|
+
- MIT
|
173
|
+
post_install_message:
|
174
|
+
rdoc_options: []
|
175
|
+
require_paths:
|
176
|
+
- lib
|
177
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
178
|
+
none: false
|
179
|
+
requirements:
|
180
|
+
- - ! '>='
|
181
|
+
- !ruby/object:Gem::Version
|
182
|
+
version: '0'
|
183
|
+
segments:
|
184
|
+
- 0
|
185
|
+
hash: -3107833515902135248
|
186
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
187
|
+
none: false
|
188
|
+
requirements:
|
189
|
+
- - ! '>='
|
190
|
+
- !ruby/object:Gem::Version
|
191
|
+
version: '0'
|
192
|
+
requirements: []
|
193
|
+
rubyforge_project:
|
194
|
+
rubygems_version: 1.8.24
|
195
|
+
signing_key:
|
196
|
+
specification_version: 3
|
197
|
+
summary: 23AndMe API client and Rails engine
|
198
|
+
test_files: []
|