twenty3andme 0.0.1

data/.document

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+lib/**/*.rb
+bin/*
+- 
+features/**/*.feature
+LICENSE.txt

data/.rspec

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+--color

data/Gemfile

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+source "http://rubygems.org"
+
+group :development, :test do
+  gem "rspec", "~> 2.8.0"
+  gem "rdoc", "~> 3.12"
+  gem "bundler"
+  gem "jeweler", "~> 1.8.4"
+  gem "wirble"
+  gem "rack-test"
+end
+
+gem 'grape'
+gem 'httparty'

data/Gemfile.lock

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+GEM
+  remote: http://rubygems.org/
+  specs:
+    activesupport (3.2.10)
+      i18n (~> 0.6)
+      multi_json (~> 1.0)
+    backports (2.6.5)
+    builder (3.1.4)
+    descendants_tracker (0.0.1)
+    diff-lcs (1.1.3)
+    git (1.2.5)
+    grape (0.2.3)
+      activesupport
+      builder
+      hashie (~> 1.2)
+      multi_json (>= 1.3.2)
+      multi_xml
+      rack
+      rack-accept
+      rack-mount
+      virtus
+    hashie (1.2.0)
+    httparty (0.8.1)
+      multi_json
+      multi_xml
+    i18n (0.6.1)
+    jeweler (1.8.4)
+      bundler (~> 1.0)
+      git (>= 1.2.5)
+      rake
+      rdoc
+    json (1.7.6)
+    multi_json (1.5.0)
+    multi_xml (0.5.1)
+    rack (1.4.1)
+    rack-accept (0.4.5)
+      rack (>= 0.4)
+    rack-mount (0.8.3)
+      rack (>= 1.0.0)
+    rack-test (0.6.2)
+      rack (>= 1.0)
+    rake (10.0.3)
+    rdoc (3.12)
+      json (~> 1.4)
+    rspec (2.8.0)
+      rspec-core (~> 2.8.0)
+      rspec-expectations (~> 2.8.0)
+      rspec-mocks (~> 2.8.0)
+    rspec-core (2.8.0)
+    rspec-expectations (2.8.0)
+      diff-lcs (~> 1.1.2)
+    rspec-mocks (2.8.0)
+    virtus (0.5.4)
+      backports (~> 2.6.1)
+      descendants_tracker (~> 0.0.1)
+    wirble (0.1.3)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  bundler
+  grape
+  httparty
+  jeweler (~> 1.8.4)
+  rack-test
+  rdoc (~> 3.12)
+  rspec (~> 2.8.0)
+  wirble

data/LICENSE.txt

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+Copyright (c) 2013 Ian Morgan
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/README.rdoc

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+= twenty3andme
+
+Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe.
+
+https://api.23andme.com/
+
+
+== Install
+
+Bundler via Gemfile
+
+  gem 'twenty3andme'
+
+
+== Use with Rails
+
+Use environment variables to configure:
+
+  CLIENT_ID=shdfkjhsdfkj23
+  CLIENT_SECRET=sadiuyf79238
+  REDIRECT_URI=http://localhost:5000/callback_listener/
+  AFTER_REDIRECT_URI=/
+  SCOPE=basic,rs3094315
+
+Send user to authorize app with 23andme, A URL helper is provided to help with this (url_for_23andme_authorize):
+
+  link_to 'authorize', url_for_23andme_authorize
+
+Then implement CallbackHandler#handle to use or store token and redirect user. Example:
+
+  module Twenty3AndMe
+    class CallbackHandler
+      def handle(token, refresh_token)
+        User.create(:token => token, :refresh_token => refresh_token)
+      end
+    end
+  end
+
+Now requests can be made with the stored token:
+
+  user = User.first
+  client = Twenty3AndMe::Client.new
+  client.token = user.token
+  client.genotype('rs3094315')
+
+
+== Use without Rails
+
+First, Authorize and receive the code from 23andme: https://api.23andme.com/authorize/?redirect_uri=http://localhost:5000/receive_code/&response_type=code&client_id=a8a1f21d3417b70de786daea7e9ce2a8&scope=ancestry
+
+  c = Twenty3AndMe::Client.new
+  c.request_token('client_id', 'client_secret', 'code_from_above', 'http://localhost:5000/receive_code/', ['ancestry', 'basic', 'rs4778241'])
+
+Requests can now be made
+
+  c.user

data/Rakefile

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+# encoding: utf-8
+
+require 'rubygems'
+require 'bundler'
+begin
+  Bundler.setup(:default, :development)
+rescue Bundler::BundlerError => e
+  $stderr.puts e.message
+  $stderr.puts "Run `bundle install` to install missing gems"
+  exit e.status_code
+end
+require 'rake'
+
+require 'jeweler'
+Jeweler::Tasks.new do |gem|
+  # gem is a Gem::Specification... see http://docs.rubygems.org/read/chapter/20 for more options
+  gem.name = "twenty3andme"
+  gem.homepage = "http://github.com/seeingidog/twenty3andme"
+  gem.license = "MIT"
+  gem.summary = %Q{23AndMe API client and Rails engine}
+  gem.description = %Q{Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe}
+  gem.email = "ian@ruby-code.com"
+  gem.authors = ["Ian Morgan"]
+  # dependencies defined in Gemfile
+end
+Jeweler::RubygemsDotOrgTasks.new
+
+require 'rspec/core'
+require 'rspec/core/rake_task'
+RSpec::Core::RakeTask.new(:spec) do |spec|
+  spec.pattern = FileList['spec/**/*_spec.rb']
+end
+
+RSpec::Core::RakeTask.new(:rcov) do |spec|
+  spec.pattern = 'spec/**/*_spec.rb'
+  spec.rcov = true
+end
+
+task :default => :spec
+
+require 'rdoc/task'
+Rake::RDocTask.new do |rdoc|
+  version = File.exist?('VERSION') ? File.read('VERSION') : ""
+
+  rdoc.rdoc_dir = 'rdoc'
+  rdoc.title = "twenty3andme #{version}"
+  rdoc.rdoc_files.include('README*')
+  rdoc.rdoc_files.include('lib/**/*.rb')
+end

data/VERSION

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+0.0.1

data/config/routes.rb

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+Rails.application.routes.draw do
+  mount Twenty3AndMe::CallbackListener    => '/callback_listener'
+end

data/lib/twenty3andme/callback_handler.rb

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+module Twenty3AndMe
+  class CallbackHandler
+    # This is a dummy, create your own method and include
+    def self.handle(token, refresh_token)
+      #use, store tokens
+    end
+  end
+end

data/lib/twenty3andme/callback_listener.rb

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+module Twenty3AndMe
+  class CallbackListener < Grape::API
+
+      resources do
+        get do
+          code = params.code
+          client = Client.new
+          client.request_token(ENV['CLIENT_ID'], ENV['CLIENT_SECRET'], code, ENV['REDIRECT_URI'], ENV['SCOPE'].split(','))
+          
+          handler = Twenty3AndMe::CallbackHandler.new
+          handler.handle(client.token, client.refresh_token)
+          
+          status 302
+          header 'Location', ENV['AFTER_REDIRECT_URI']
+        end
+      end
+
+  end
+end

data/lib/twenty3andme/client.rb

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+module Twenty3AndMe
+  class Client
+    include HTTParty
+    base_uri 'api.23andme.com'
+    VERSION = '/1'
+    
+    attr_accessor :token    
+    attr_accessor :refresh_token    
+    
+    def get(path)
+      options = { :headers => {"Authorization" => "Bearer #{@token}"} }
+      fullpath = URI.escape(VERSION + path)
+      self.class.get(fullpath, options).parsed_response
+    end
+    
+    def request_token(client_id, client_secret, code, redirect_uri, scope)
+      scope_uri = Array(scope).join(" ")
+      req_body = {:client_id => client_id, :client_secret => client_secret, :grant_type => 'authorization_code', :code => code, :redirect_uri => redirect_uri, :scope => scope_uri}
+      resp = self.class.post("https://api.23andme.com:443/token", :body => req_body)
+      
+      @token = resp['access_token']
+      @refresh_token = resp['refresh_token']
+    end
+    
+    #TODO
+    def request_refresh_token()
+    end
+    
+    ### Requests
+    
+    def user
+      get('/user')
+    end
+    
+    def names
+      get('/names')
+    end
+
+    def haplogroups
+      get('/haplogroups')
+    end
+    
+    def genotypes(locations)
+      locations_uri = Array(locations).join(" ")
+      get("/genotypes/?locations=#{locations_uri}")
+    end
+    
+    def ancestry(threshold)
+      get("/ancestry/?threshold=#{threshold.to_f}")
+    end
+    
+    def relatives
+      get("/relatives")
+    end
+    
+    def genomes(profile_id)
+      get("/genomes/#{profile_id}")
+    end
+    
+  end
+end

data/lib/twenty3andme/engine.rb

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+module Twenty3AndMe
+  class Engine < Rails::Engine
+    paths['config'] << 'config'
+    
+    initializer 'twenty3andme.action_controller' do |app|
+      ActiveSupport.on_load :action_controller do
+        helper Twenty3AndMe::Helpers
+      end
+    end
+    
+  end
+end

data/lib/twenty3andme/helpers.rb

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+module Twenty3AndMe
+  module Helpers
+    def url_for_23andme_authorize
+      return "https://api.23andme.com/authorize/?redirect_uri=#{ENV['REDIRECT_URI']}&response_type=code&client_id=#{ENV['CLIENT_ID']}&scope=#{ENV['SCOPE'].split(',').join("%20")}"
+    end
+  end
+end

data/lib/twenty3andme.rb

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+module Twenty3AndMe
+end
+
+require 'httparty'
+require 'grape'
+
+require_relative 'twenty3andme/client'
+require_relative 'twenty3andme/callback_listener'
+require_relative 'twenty3andme/callback_handler'
+require_relative 'twenty3andme/helpers'
+require_relative 'twenty3andme/engine' if defined?(Rails)

data/spec/callback_listener_spec.rb

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+require 'spec_helper'
+
+describe Twenty3AndMe::CallbackListener do
+  include Rack::Test::Methods
+
+  def app
+    Twenty3AndMe::CallbackListener
+  end
+
+  describe Twenty3AndMe::CallbackListener do
+    describe "GET /?code=adc996063679f1a400aa0e13c54094dc" do
+      it "returns the provided code from 23andme" do
+        get "/?code=adc996063679f1a400aa0e13c54094dc"
+        last_response.status.should == 200
+      end
+    end
+  end
+end

data/spec/spec_helper.rb

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+$LOAD_PATH.unshift(File.join(File.dirname(__FILE__), '..', 'lib'))
+$LOAD_PATH.unshift(File.dirname(__FILE__))
+require 'rspec'
+require 'twenty3andme'
+require "rack/test"
+
+# Requires supporting files with custom matchers and macros, etc,
+# in ./support/ and its subdirectories.
+Dir["#{File.dirname(__FILE__)}/support/**/*.rb"].each {|f| require f}
+
+RSpec.configure do |config|
+  
+end

data/spec/twenty3andme_spec.rb

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+require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
+
+describe "Twenty3andme" do
+  
+  context "API Client" do
+    before do
+    end
+    
+    pending "test the client " do
+    end
+  end
+  
+end
+
+

data/twenty3andme.gemspec

@@ -0,0 +1,79 @@
+# Generated by jeweler
+# DO NOT EDIT THIS FILE DIRECTLY
+# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = "twenty3andme"
+  s.version = "0.0.1"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Ian Morgan"]
+  s.date = "2013-01-06"
+  s.description = "Ruby API client and Rails engine for creating applications that integrate with data from the personal genetic testing service 23AndMe"
+  s.email = "ian@ruby-code.com"
+  s.extra_rdoc_files = [
+    "LICENSE.txt",
+    "README.rdoc"
+  ]
+  s.files = [
+    ".document",
+    ".rspec",
+    "Gemfile",
+    "Gemfile.lock",
+    "LICENSE.txt",
+    "README.rdoc",
+    "Rakefile",
+    "VERSION",
+    "config/routes.rb",
+    "lib/twenty3andme.rb",
+    "lib/twenty3andme/callback_handler.rb",
+    "lib/twenty3andme/callback_listener.rb",
+    "lib/twenty3andme/client.rb",
+    "lib/twenty3andme/engine.rb",
+    "lib/twenty3andme/helpers.rb",
+    "spec/callback_listener_spec.rb",
+    "spec/spec_helper.rb",
+    "spec/twenty3andme_spec.rb",
+    "twenty3andme.gemspec"
+  ]
+  s.homepage = "http://github.com/seeingidog/twenty3andme"
+  s.licenses = ["MIT"]
+  s.require_paths = ["lib"]
+  s.rubygems_version = "1.8.24"
+  s.summary = "23AndMe API client and Rails engine"
+
+  if s.respond_to? :specification_version then
+    s.specification_version = 3
+
+    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+      s.add_runtime_dependency(%q<grape>, [">= 0"])
+      s.add_runtime_dependency(%q<httparty>, [">= 0"])
+      s.add_development_dependency(%q<rspec>, ["~> 2.8.0"])
+      s.add_development_dependency(%q<rdoc>, ["~> 3.12"])
+      s.add_development_dependency(%q<bundler>, [">= 0"])
+      s.add_development_dependency(%q<jeweler>, ["~> 1.8.4"])
+      s.add_development_dependency(%q<wirble>, [">= 0"])
+      s.add_development_dependency(%q<rack-test>, [">= 0"])
+    else
+      s.add_dependency(%q<grape>, [">= 0"])
+      s.add_dependency(%q<httparty>, [">= 0"])
+      s.add_dependency(%q<rspec>, ["~> 2.8.0"])
+      s.add_dependency(%q<rdoc>, ["~> 3.12"])
+      s.add_dependency(%q<bundler>, [">= 0"])
+      s.add_dependency(%q<jeweler>, ["~> 1.8.4"])
+      s.add_dependency(%q<wirble>, [">= 0"])
+      s.add_dependency(%q<rack-test>, [">= 0"])
+    end
+  else
+    s.add_dependency(%q<grape>, [">= 0"])
+    s.add_dependency(%q<httparty>, [">= 0"])
+    s.add_dependency(%q<rspec>, ["~> 2.8.0"])
+    s.add_dependency(%q<rdoc>, ["~> 3.12"])
+    s.add_dependency(%q<bundler>, [">= 0"])
+    s.add_dependency(%q<jeweler>, ["~> 1.8.4"])
+    s.add_dependency(%q<wirble>, [">= 0"])
+    s.add_dependency(%q<rack-test>, [">= 0"])
+  end
+end
+

metadata

@@ -0,0 +1,198 @@
+--- !ruby/object:Gem::Specification
+name: twenty3andme
+version: !ruby/object:Gem::Version
+  version: 0.0.1
+  prerelease: 
+platform: ruby
+authors:
+- Ian Morgan
+autorequire: 
+bindir: bin
+cert_chain: []
+date: 2013-01-06 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: grape
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: httparty
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: rspec
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: 2.8.0
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: 2.8.0
+- !ruby/object:Gem::Dependency
+  name: rdoc
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '3.12'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '3.12'
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: jeweler
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: 1.8.4
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: 1.8.4
+- !ruby/object:Gem::Dependency
+  name: wirble
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: rack-test
+  requirement: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    none: false
+    requirements:
+    - - ! '>='
+      - !ruby/object:Gem::Version
+        version: '0'
+description: Ruby API client and Rails engine for creating applications that integrate
+  with data from the personal genetic testing service 23AndMe
+email: ian@ruby-code.com
+executables: []
+extensions: []
+extra_rdoc_files:
+- LICENSE.txt
+- README.rdoc
+files:
+- .document
+- .rspec
+- Gemfile
+- Gemfile.lock
+- LICENSE.txt
+- README.rdoc
+- Rakefile
+- VERSION
+- config/routes.rb
+- lib/twenty3andme.rb
+- lib/twenty3andme/callback_handler.rb
+- lib/twenty3andme/callback_listener.rb
+- lib/twenty3andme/client.rb
+- lib/twenty3andme/engine.rb
+- lib/twenty3andme/helpers.rb
+- spec/callback_listener_spec.rb
+- spec/spec_helper.rb
+- spec/twenty3andme_spec.rb
+- twenty3andme.gemspec
+homepage: http://github.com/seeingidog/twenty3andme
+licenses:
+- MIT
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  none: false
+  requirements:
+  - - ! '>='
+    - !ruby/object:Gem::Version
+      version: '0'
+      segments:
+      - 0
+      hash: -3107833515902135248
+required_rubygems_version: !ruby/object:Gem::Requirement
+  none: false
+  requirements:
+  - - ! '>='
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 1.8.24
+signing_key: 
+specification_version: 3
+summary: 23AndMe API client and Rails engine
+test_files: []