trinitycrmod 0.8.13 → 0.8.14

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
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-  data.tar.gz: 8d18a794422b46b5d960cd4274084efcf9262fc2
+  metadata.gz: ac48b8120034bba1ff547f89a156758a863b90b0
+  data.tar.gz: a4018812ace9d277f4484aeff83a50e578c43dd0
 SHA512:
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+  metadata.gz: 46652a50380f96c3ce61224f31f92e6cb76de117208fed9c3c145cbe26222e3d1cc1112e7a064c5c0b2e68c1b1140f764300e514db836eee40d5ebf7a19178bd
+  data.tar.gz: be62f0e08a7b53c73945c8ec1fd150308140da21cf51d8e0984ba2db26cc73a021abf262a562865ffd812b61f07a05d1a119eb924219633ac8f0fb4649992833

data/VERSION

@@ -1 +1 @@
-0.8.13
+0.8.14

data/lib/trinitycrmod/namelists.rb

@@ -591,7 +591,7 @@
           :explanation=>
            "This variable must be a fortran boolean. (In Ruby this is represented as a string: e.g. '.true.')"}],
        :type=>:Fortran_Bool,
-       :autoscanned_defaults=>[".true."]},
+       :autoscanned_defaults=>[".false."]},
      :deltadj=>
       {:should_include=>"true",
        :description=>" If the iteration fails, reduce timestep by deltadj",
@@ -602,7 +602,7 @@
           :explanation=>
            "This variable must be a floating point number (an integer is also acceptable: it will be converted into a floating point number)."}],
        :type=>:Float,
-       :autoscanned_defaults=>[4.0]},
+       :autoscanned_defaults=>[2.0]},
      :avail_cpu_time=>
       {:should_include=>"true",
        :description=>" Number of seconds of wall clock time available",
@@ -1133,7 +1133,7 @@
         [{:test=>"kind_of? String",
           :explanation=>"This variable must be a string."}],
        :type=>:String,
-       :autoscanned_defaults=>["constant"]},
+       :autoscanned_defaults=>["proportional"]},
      :damping=>
       {:should_include=>"true",
        :description=>" If > 0 damp grid scale oscillations in the profiles",
@@ -1144,7 +1144,7 @@
           :explanation=>
            "This variable must be a floating point number (an integer is also acceptable: it will be converted into a floating point number)."}],
        :type=>:Float,
-       :autoscanned_defaults=>[1.0]},
+       :autoscanned_defaults=>[0.0]},
      :neo_option=>
       {:should_include=>"true",
        :description=>" Choice for neoclassical fluxes: 'analytic', 'neo'",
@@ -1154,7 +1154,18 @@
         [{:test=>"kind_of? String",
           :explanation=>"This variable must be a string."}],
        :type=>:String,
-       :autoscanned_defaults=>["analytic"]}}},
+       :autoscanned_defaults=>["analytic"]},
+     :flux_match_switches=>
+      {:should_include=>"true",
+       :description=>
+        " String of flux matching choices. Each letter controls a species (electrons on the left). n = none, d = density, t = temperature, a = all",
+       :help=>
+        " String of flux matching choices. Each letter controls a species (electrons on the left). n = none, d = density, t = temperature, a = all",
+       :code_name=>:flux_match_switches,
+       :must_pass=>
+        [{:test=>"kind_of? String",
+          :explanation=>"This variable must be a string."}],
+       :type=>:String}}},
  :init=>
   {:description=>"",
    :should_include=>"true",
@@ -1443,7 +1454,19 @@
           :explanation=>
            "This variable must be a floating point number (an integer is also acceptable: it will be converted into a floating point number)."}],
        :type=>:Float,
-       :autoscanned_defaults=>[-1.0]}}},
+       :autoscanned_defaults=>[-1.0]},
+     :evolve_boundary=>
+      {:should_include=>"true",
+       :description=>
+        " set to true to use time-dependent boundary density, temperature, etc.",
+       :help=>
+        " set to true to use time-dependent boundary density, temperature, etc.",
+       :code_name=>:evolve_boundary,
+       :must_pass=>
+        [{:test=>"kind_of? String and FORTRAN_BOOLS.include? self",
+          :explanation=>
+           "This variable must be a fortran boolean. (In Ruby this is represented as a string: e.g. '.true.')"}],
+       :type=>:Fortran_Bool}}},
  :sources=>
   {:description=>"",
    :should_include=>"true",
@@ -1725,7 +1748,38 @@
           :explanation=>
            "This variable must be a floating point number (an integer is also acceptable: it will be converted into a floating point number)."}],
        :type=>:Float,
-       :autoscanned_defaults=>[1.0]}}},
+       :autoscanned_defaults=>[1.0]},
+     :evolve_sources=>
+      {:should_include=>"true",
+       :description=>" include time-dependent sources",
+       :help=>" include time-dependent sources",
+       :code_name=>:evolve_sources,
+       :must_pass=>
+        [{:test=>"kind_of? String and FORTRAN_BOOLS.include? self",
+          :explanation=>
+           "This variable must be a fortran boolean. (In Ruby this is represented as a string: e.g. '.true.')"}],
+       :type=>:Fortran_Bool},
+     :adjust_beam_modulation=>
+      {:should_include=>"true",
+       :description=>
+        " allows for artifical modification of neutral beam modulation",
+       :help=>" allows for artifical modification of neutral beam modulation",
+       :code_name=>:adjust_beam_modulation,
+       :must_pass=>
+        [{:test=>"kind_of? String and FORTRAN_BOOLS.include? self",
+          :explanation=>
+           "This variable must be a fortran boolean. (In Ruby this is represented as a string: e.g. '.true.')"}],
+       :type=>:Fortran_Bool},
+     :modulation_factor=>
+      {:should_include=>"true",
+       :description=>" factor by which to multiply beam modulation amplitude",
+       :help=>" factor by which to multiply beam modulation amplitude",
+       :code_name=>:modulation_factor,
+       :must_pass=>
+        [{:test=>"kind_of? Numeric",
+          :explanation=>
+           "This variable must be a floating point number (an integer is also acceptable: it will be converted into a floating point number)."}],
+       :type=>:Float}}},
  :physics=>
   {:description=>"",
    :should_include=>"true",

data/lib/trinitycrmod/trinity.rb

@@ -208,6 +208,8 @@ class CodeRunner
         @run_name += "_t"
         if @restart_id
           @runner.run_list[@restart_id].restart(self)
+        else
+          make_initial_profiles if self.respond_to?(:make_initial_profiles) 
         end
         if uses_ecom?
           setup_ecom

data/trinitycrmod.gemspec

@@ -2,16 +2,16 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: trinitycrmod 0.8.13 ruby lib
+# stub: trinitycrmod 0.8.14 ruby lib
 
 Gem::Specification.new do |s|
   s.name = "trinitycrmod".freeze
-  s.version = "0.8.13"
+  s.version = "0.8.14"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib".freeze]
   s.authors = ["Edmund Highcock".freeze]
-  s.date = "2017-01-30"
+  s.date = "2017-04-27"
   s.description = "This module allows Trinity, the Multiscale Gyrokinetic Turbulent Transport solver for Fusion Reactors, to harness the power of CodeRunner, a framework for the automated running and analysis of simulations.".freeze
   s.email = "edmundhighcock@sourceforge.net".freeze
   s.extra_rdoc_files = [

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: trinitycrmod
 version: !ruby/object:Gem::Version
-  version: 0.8.13
+  version: 0.8.14
 platform: ruby
 authors:
 - Edmund Highcock
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2017-01-30 00:00:00.000000000 Z
+date: 2017-04-27 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: coderunner