traject 0.9.1 → 0.10.0

data/lib/traject/marc4j_reader.rb

@@ -49,33 +49,16 @@ class Traject::Marc4JReader
     ensure_marc4j_loaded!
   end
 
-    # Loads solrj if not already loaded. By loading all jars found
-  # in settings["solrj.jar_dir"]
+  # Loads solrj unless it appears to already be loaded.
+  #
+  # Will load from settings['marc4j_reader.jar_dir'] if given, otherwise
+  # bundled vendor location.
+  #
+  # Will java_import MarcPermissiveStreamReader and MarcXmlReader so you
+  # have those available as un-namespaced classes. 
   def ensure_marc4j_loaded!
-    unless defined?(MarcPermissiveStreamReader)
-      require 'java'
-
-      tries = 0
-      begin
-        tries += 1
-        java_import org.marc4j.MarcPermissiveStreamReader
-        java_import org.marc4j.MarcXmlReader
-      rescue NameError  => e
-        # /Users/jrochkind/code/solrj-gem/lib"
-
-        include_jar_dir = File.expand_path("../../vendor/marc4j/lib", File.dirname(__FILE__))
-
-        jardir = settings["marc4j_reader.jar_dir"] || include_jar_dir
-        Dir.glob("#{jardir}/*.jar") do |x|
-          require x
-        end
-
-        if tries > 1
-          raise LoadError.new("Can not find Marc4J java classes")
-        else
-          retry
-        end
-      end
+    unless defined?(MarcPermissiveStreamReader) && defined?(MarcXmlReader)
+      Traject::Util.require_marc4j_jars(settings)
     end
   end
 

data/lib/traject/marc_extractor.rb

@@ -1,5 +1,3 @@
-
-
 module Traject
   # MarcExtractor is a class for extracting lists of strings from a MARC::Record,
   # according to specifications. See #parse_string_spec for description of string
@@ -8,28 +6,36 @@ module Traject
   #
   # Examples:
   #
-  #    array_of_stuff = MarcExtractor.new(marc_record, "001:245abc:700a").extract
-  #    values         = MarcExtractor.new(marc_record, "040a", :seperator => nil).extract
+  #    array_of_stuff = MarcExtractor.new("001:245abc:700a").extract(marc_record)
+  #    values         = MarcExtractor.new("040a", :seperator => nil).extract(marc_record)
+  #
+  #
+  # == Note on Performance and MarcExtractor creation and reuse
+  #
+  # A MarcExtractor is somewhat expensive to create, and has been shown in profiling/
+  # benchmarking to be a bottleneck if you end up creating one for each marc record
+  # processed.  Instead, a single MarcExtractor should be created, and re-used
+  # per MARC record.
+  #
+  # If you are creating a traject 'macro' method, here's one way to do that,
+  # capturing the MarcExtractor under closure:
   #
+  #    def some_macro(spec, other_args, whatever)
+  #      extractor = MarcExtractor.new( spec )
+  #      # ...
+  #      return lambda do |record, accumulator, context|
+  #         #...
+  #         accumulator.concat extractor.extract(record)
+  #         #...
+  #      end
+  #    end
+  #
+  # In other cases, you may find it convenient to improve performance by
+  # using the MarcExtractor#cached method, instead of MarcExtractor#new, to
+  # lazily create and then re-use a MarcExtractor object with
+  # particular initialization arguments.
   class MarcExtractor
-    attr_accessor :options, :marc_record, :spec_hash
-
-
-    # Convenience method to construct a MarcExtractor object and
-    # run extract on it.
-    #
-    # First arg is a marc record.
-    #
-    # Second arg is either a string that will be given to parse_string_spec,
-    # OR a hash that's the return value of parse_string_spec.
-    #
-    # Third arg is an optional options hash that will be passed as
-    # third arg of MarcExtractor constructor.
-    def self.extract_by_spec(marc_record, specification, options = {})
-      (raise ArgumentError, "first argument must not be nil") if marc_record.nil?
-
-      Traject::MarcExtractor.new(marc_record, specification, options).extract
-    end
+    attr_accessor :options, :spec_hash
 
     # Take a hash that's the output of #parse_string_spec, return
     # an array of strings extracted from a marc record accordingly
@@ -47,21 +53,71 @@ module Traject
     #                     that match spec. Also:
     #                     * false => do not include.
     #                     * :only => only include linked 880s, not original
-    def initialize(marc_record, spec, options = {})
+    def initialize(spec, options = {})
       self.options = {
         :seperator => ' ',
         :alternate_script => :include
       }.merge(options)
 
-      self.marc_record = marc_record
-
       self.spec_hash = spec.kind_of?(Hash) ? spec : self.class.parse_string_spec(spec)
+
+
+      # Tags are "interesting" if we have a spec that might cover it
+      @interesting_tags_hash = {}
+
+      # By default, interesting tags are those represented by keys in spec_hash.
+      # Add them unless we only care about alternate scripts.
+      unless options[:alternate_script] == :only
+        self.spec_hash.keys.each {|tag| @interesting_tags_hash[tag] = true}
+      end
+
+      # If we *are* interested in alternate scripts, add the 880
+      if options[:alternate_script] != false
+        @interesting_tags_hash['880'] = true
+      end
+    end
+
+    # Takes the same arguments as MarcExtractor.new, but will re-use an existing
+    # cached MarcExtractor already created with given initialization arguments,
+    # if available.
+    #
+    # This can be used to increase performance of indexing routines, as
+    # MarcExtractor creation has been shown via profiling/benchmarking
+    # to be expensive.
+    #
+    # Cache is thread-local, so should be thread-safe.
+    #
+    # You should _not_ modify the state of any MarcExtractor retrieved
+    # via cached, as the MarcExtractor will be re-used and shared (possibly
+    # between threads even!). We try to use ruby #freeze to keep you from doing so,
+    # although if you try hard enough you can surely find a way to do something
+    # you shouldn't.
+    #
+    #    extractor = MarcExtractor.cached("245abc:700a", :seperator => nil)
+    def self.cached(*args)
+      cache = (Thread.current[:marc_extractor_cached] ||= Hash.new)
+      extractor = (cache[args] ||= begin
+        ex = Traject::MarcExtractor.new(*args).freeze
+        ex.options.freeze
+        ex.spec_hash.freeze
+        ex
+      end)
+
+      return extractor
     end
 
+    # Check to see if a tag is interesting (meaning it may be covered by a spec
+    # and the passed-in options about alternate scripts)
+
+    def interesting_tag?(tag)
+      return @interesting_tags_hash.include?(tag)
+    end
+
+
     # Converts from a string marc spec like "245abc:700a" to a nested hash used internally
     # to represent the specification.
     #
-    # a String specification is a string of form:
+    # a String specification is a string (or array of strings) of form:
     #  {tag}{|indicators|}{subfields} seperated by colons
     # tag is three chars (usually but not neccesarily numeric),
     # indicators are optional two chars prefixed by hyphen,
@@ -93,8 +149,9 @@ module Traject
     # See tests for more examples.
     def self.parse_string_spec(spec_string)
       hash = {}
+      spec_strings = spec_string.is_a?(Array) ? spec_string.map{|s| s.split(/\s*:\s*/)}.flatten : spec_string.split(/s*:\s*/)
 
-      spec_string.split(":").each do |part|
+      spec_strings.each do |part|
         if (part =~ /\A([a-zA-Z0-9]{3})(\|([a-z0-9\ \*]{2})\|)?([a-z0-9]*)?\Z/)
           # variable field
           tag, indicators, subfields = $1, $3, $4
@@ -129,10 +186,10 @@ module Traject
 
 
     # Returns array of strings, extracted values. Maybe empty array.
-    def extract
+    def extract(marc_record)
       results = []
 
-      self.each_matching_line do |field, spec|
+      self.each_matching_line(marc_record) do |field, spec|
         if control_field?(field)
           results << (spec[:bytes] ? field.value.byteslice(spec[:bytes]) : field.value)
         else
@@ -150,9 +207,17 @@ module Traject
     #
     # Third (optional) arg to block is self, the MarcExtractor object, useful for custom
     # implementations.
-    def each_matching_line
-      self.marc_record.each do |field|
-        if (spec = spec_covering_field(field)) && matches_indicators(field, spec)
+    def each_matching_line(marc_record)
+      marc_record.fields(@interesting_tags_hash.keys).each do |field|
+
+        spec = spec_covering_field(field)
+
+        # Don't have a spec that addresses this field? Move on.
+        next unless spec
+
+        # Make sure it matches indicators too, spec_covering_field
+        # doens't check that.
+        if matches_indicators(field, spec)
           yield(field, spec, self)
         end
       end
@@ -162,9 +227,9 @@ module Traject
     # but collects results of block into an array -- flattens any subarrays for you!
     #
     # Useful for re-use of this class for custom processing
-    def collect_matching_lines
+    def collect_matching_lines(marc_record)
       results = []
-      self.each_matching_line do |field, spec, extractor|
+      self.each_matching_line(marc_record) do |field, spec, extractor|
         results.concat [yield(field, spec, extractor)].flatten
       end
       return results
@@ -187,24 +252,32 @@ module Traject
       return options[:seperator] ? [ subfields.join( options[:seperator]) ] : subfields
     end
 
-    # Is there a spec covering extraction from this field?
-    # May return true on 880's matching other tags depending
-    # on value of :alternate_script
-    # if :alternate_script is :only, will return original spec when field is an 880.
-    # otherwise will always return nil for 880s, you have to handle :alternate_script :include
-    # elsewhere, to add in the 880 in the right order
+
+    # Find a spec, if any, covering extraction from this field
+    #
+    # When given an 880, will return the spec (if any) for the linked tag iff
+    # we have a $6 and we want the alternate script.
+    #
+    # Returns nil if no matching spec is found
+
     def spec_covering_field(field)
-      if field.tag == "880" && field['6'] && options[:alternate_script] != false
-        # pull out the spec for corresponding original marc tag this 880 corresponds to
-        # Due to bug in jruby https://github.com/jruby/jruby/issues/886 , we need
-        # to do this weird encode gymnastics, which fixes it for mysterious reasons.
-        orig_field = field["6"].encode(field["6"].encoding).byteslice(0,3)
-        field["6"] && self.spec_hash[  orig_field  ]
-      elsif options[:alternate_script] != :only
-        self.spec_hash[field.tag]
+      tag = field.tag
+
+      # Short-circuit the unintersting stuff
+      return nil unless interesting_tag?(tag)
+
+      # Due to bug in jruby https://github.com/jruby/jruby/issues/886 , we need
+      # to do this weird encode gymnastics, which fixes it for mysterious reasons.
+
+      if tag == "880" && field['6']
+        tag = field["6"].encode(field["6"].encoding).byteslice(0,3)
       end
+
+      # Take the resulting tag and get the spec from it (or the default nil if there isn't a spec for this tag)
+      spec = self.spec_hash[tag]
     end
 
+
     def control_field?(field)
       # should the MARC gem have a more efficient way to do this,
       # define #control_field? on both ControlField and DataField?

data/lib/traject/mock_reader.rb

@@ -0,0 +1,87 @@
+# Encoding: utf-8
+require 'marc'
+require 'json'
+module Traject
+  
+  # A mock reader, designed to do almost no work during a run to provide better benchmarking
+  #
+  # It pulls in 20 records from the end of this file and then just returns
+  # them over and over again, up to the specified limit
+  #
+  # Specify in a config files as follows:
+  #
+    # require 'traject/mock_writer'
+    # require 'traject/mock_reader'
+    #   
+    # settings do
+    #   store "reader_class_name", "Traject::MockReader"
+    #   store "writer_class_name", "Traject::MockWriter"
+    #   store "mock_reader.limit", 4_000 # default is 10_000
+    # end
+  
+  class MockReader
+    
+    attr_accessor :limit
+    
+    # @param [Ignored] input_stream (ignored)
+    # @param [Hash] settings (looks only for an integer in 'mock_reader.limit')
+    def initialize(input_stream, settings = {})
+      @records = []
+      @limit = settings["mock_reader.limit"]  || 10_000
+      
+      this_file_iter = File.open(__FILE__).each_line
+      
+      while true
+        line = this_file_iter.next
+        break if line =~ /^\_\_END\_\_/
+      end
+      
+      begin
+        while true
+          json = this_file_iter.next
+          next unless json =~ /\S/
+          @records << MARC::Record.new_from_hash(JSON.parse(json))
+        end
+      rescue StopIteration
+      end
+      
+    end
+
+    
+    def each
+      unless block_given?
+        enum_for(:each)
+      else
+        size = @records.size
+        @limit.times do |i|
+          yield @records[i % size]
+        end
+      end
+    end
+    
+    
+  end
+end
+
+__END__
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+

data/lib/traject/mock_writer.rb

@@ -0,0 +1,34 @@
+# A writer for Traject::Indexer, that just writes out
+# all the output as serialized text with #puts. 
+#
+# Should be thread-safe (ie, multiple worker threads can be calling #put
+# concurrently), by wrapping write to actual output file in a mutex synchronize.
+# This does not seem to effect performance much, as far as I could tell
+# benchmarking.
+#
+# Output will be sent to settings["output_file"] string path, or else
+# settings["output_stream"] (ruby IO object), or else stdout.
+#
+# This class can be sub-classed to write out different serialized
+# reprentations -- subclasses will just override the #serialize
+# method. For instance, see JsonWriter. 
+class Traject::MockWriter
+  attr_reader :settings
+
+  def initialize(argSettings)
+  end
+
+
+  def serialize(context)
+    # null
+  end    
+
+  def put(context)
+    # null
+  end
+
+  def close
+    # null
+  end
+
+end

data/lib/traject/solrj_writer.rb

@@ -114,28 +114,7 @@ class Traject::SolrJWriter
   # in settings["solrj.jar_dir"]
   def ensure_solrj_loaded!
     unless defined?(HttpSolrServer) && defined?(SolrInputDocument)
-      require 'java'
-
-      tries = 0
-      begin
-        tries += 1
-        java_import org.apache.solr.client.solrj.impl.HttpSolrServer
-        java_import org.apache.solr.common.SolrInputDocument
-      rescue NameError  => e
-        # /Users/jrochkind/code/solrj-gem/lib"
-
-        included_jar_dir = File.expand_path("../../vendor/solrj/lib", File.dirname(__FILE__))
-
-        jardir = settings["solrj.jar_dir"] || included_jar_dir
-        Dir.glob("#{jardir}/*.jar") do |x|
-          require x
-        end
-        if tries > 1
-          raise LoadError.new("Can not find SolrJ java classes")
-        else
-          retry
-        end
-      end
+      Traject::Util.require_solrj_jars(settings)
     end
 
     # And for now, SILENCE SolrJ logging

data/lib/traject/util.rb

@@ -21,10 +21,116 @@ module Traject
     end
 
     # From ruby #caller method, you get an array. Pass one line
-    # of the array here,  get just file and line number out. 
+    # of the array here,  get just file and line number out.
     def self.extract_caller_location(str)
       str.split(':in `').first
     end
 
+    # Requires marc4j jar(s) from settings['marc4j.jar_dir'] if given, otherwise
+    # uses jars bundled with traject gem in ./vendor
+    #
+    # Have to pass in a settings arg, so we can check it for specified jar dir.
+    #
+    # Tries not to do the dirglob and require if marc4j has already been loaded.
+    # Will define global constants with classes MarcPermissiveStreamReader and MarcXmlReader
+    # if not already defined.
+    #
+    # This is all a bit janky, maybe there's a better way to do this? We do want
+    # a 'require' method defined somewhere utility, so multiple classes can
+    # use it, including extra gems. This method IS used by extra gems, so should
+    # be considered part of the API -- after it's called, those top-level
+    # globals should be available, and marc4j should be loaded.
+    def self.require_marc4j_jars(settings)
+      jruby_ensure_init!
+
+      tries = 0
+      begin
+        tries += 1
+
+        org.marc4j
+
+        # java_import which we'd normally use weirdly doesn't work
+        # from a class method. https://github.com/jruby/jruby/issues/975
+        Object.const_set("MarcPermissiveStreamReader",  org.marc4j.MarcPermissiveStreamReader) unless defined? ::MarcPermissiveStreamReader
+        Object.const_set("MarcXmlReader",  org.marc4j.MarcXmlReader) unless defined? ::MarcXmlReader
+      rescue NameError  => e
+        # /Users/jrochkind/code/solrj-gem/lib"
+
+        include_jar_dir = File.expand_path("../../vendor/marc4j/lib", File.dirname(__FILE__))
+
+        jardir = settings["marc4j.jar_dir"] || include_jar_dir
+        Dir.glob("#{jardir}/*.jar") do |x|
+          require x
+        end
+
+        if tries > 1
+          raise LoadError.new("Can not find Marc4J java classes")
+        else
+          retry
+        end
+      end
+    end
+
+    # Requires solrj jar(s) from settings['solrj.jar_dir'] if given, otherwise
+    # uses jars bundled with traject gem in ./vendor
+    #
+    # Have to pass in a settings arg, so we can check it for specified jar dir.
+    #
+    # Tries not to do the dirglob and require if solrj has already been loaded.
+    # Will define global constants with classes HttpSolrServer and SolrInputDocument
+    # if not already defined.
+    #
+    # This is all a bit janky, maybe there's a better way to do this? We do want
+    # a 'require' method defined somewhere utility, so multiple classes can
+    # use it, including extra gems. This method may be used by extra gems, so should
+    # be considered part of the API -- after it's called, those top-level
+    # globals should be available, and solrj should be loaded.
+    def self.require_solrj_jars(settings)
+      jruby_ensure_init!
+
+      tries = 0
+      begin
+        tries += 1
+
+        org.apache.solr
+        org.apache.solr.client.solrj
+
+        # java_import which we'd normally use weirdly doesn't work
+        # from a class method. https://github.com/jruby/jruby/issues/975
+        Object.const_set("HttpSolrServer", org.apache.solr.client.solrj.impl.HttpSolrServer) unless defined? ::HttpSolrServer
+        Object.const_set("SolrInputDocument", org.apache.solr.common.SolrInputDocument) unless defined? ::SolrInputDocument
+      rescue NameError  => e
+        # /Users/jrochkind/code/solrj-gem/lib"
+
+        included_jar_dir = File.expand_path("../../vendor/solrj/lib", File.dirname(__FILE__))
+
+        jardir = settings["solrj.jar_dir"] || included_jar_dir
+        Dir.glob("#{jardir}/*.jar") do |x|
+          require x
+        end
+        if tries > 1
+          raise LoadError.new("Can not find SolrJ java classes")
+        else
+          retry
+        end
+      end
+    end
+
+    # just does a `require 'java'` but rescues the exception if we
+    # aren't jruby, and raises a better error message.  
+    # Pass in a developer-presentable name of a feature to include in the error
+    # message if you want. 
+    def self.jruby_ensure_init!(feature = nil)
+      begin
+        require 'java'
+      rescue LoadError => e
+        feature ||= "A traject feature is in use that"
+        msg = if feature
+          "#{feature} requires jruby, but you do not appear to be running under jruby. We recommend `chruby` for managing multiple ruby installs."
+        end
+        raise LoadError.new(msg)
+      end
+    end
+
   end
 end