toxbank-investigation 0.0.1pre-x86-linux

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (67) hide show
  1. data/.gitignore +11 -0
  2. data/Gemfile +7 -0
  3. data/Gemfile.lock +101 -0
  4. data/LICENSE +674 -0
  5. data/README +14 -0
  6. data/Rakefile +31 -0
  7. data/application.rb +246 -0
  8. data/bin/toxbank-investigation-install +76 -0
  9. data/config/production.rb +9 -0
  10. data/config.ru +5 -0
  11. data/java/config/isa_configurator/cellcount_flowcytometry.xml +1 -0
  12. data/java/config/isa_configurator/cellsorting_flowcyt.xml +5 -0
  13. data/java/config/isa_configurator/clinical_chemistry.xml +1 -0
  14. data/java/config/isa_configurator/copynumvariation_micro.xml +1 -0
  15. data/java/config/isa_configurator/dnamethylation_micro.xml +1 -0
  16. data/java/config/isa_configurator/dnamethylation_seq.xml +1 -0
  17. data/java/config/isa_configurator/envgen_survey_seq.xml +1 -0
  18. data/java/config/isa_configurator/genome_seq.xml +1 -0
  19. data/java/config/isa_configurator/hematology.xml +1 -0
  20. data/java/config/isa_configurator/heterozygosity_micro.xml +1 -0
  21. data/java/config/isa_configurator/histology.xml +1 -0
  22. data/java/config/isa_configurator/histonemodification_seq.xml +1 -0
  23. data/java/config/isa_configurator/metaboliteprofiling_ms.xml +114 -0
  24. data/java/config/isa_configurator/metaboliteprofiling_nmr.xml +114 -0
  25. data/java/config/isa_configurator/metagenome_seq.xml +1 -0
  26. data/java/config/isa_configurator/nru_assay.xml +8 -0
  27. data/java/config/isa_configurator/ppi_detection_micro.xml +1 -0
  28. data/java/config/isa_configurator/protein_dna_binding_ident_micro.xml +1 -0
  29. data/java/config/isa_configurator/protein_dna_binding_ident_seq.xml +1 -0
  30. data/java/config/isa_configurator/protein_expression_ge.xml +101 -0
  31. data/java/config/isa_configurator/protein_expression_micro.xml +1 -0
  32. data/java/config/isa_configurator/protein_expression_ms.xml +1 -0
  33. data/java/config/isa_configurator/proteinident_ms.xml +1 -0
  34. data/java/config/isa_configurator/snpanalysis_micro.xml +1 -0
  35. data/java/config/isa_configurator/studySample.xml +1 -0
  36. data/java/config/isa_configurator/tfbsident_micro.xml +1 -0
  37. data/java/config/isa_configurator/tfbsident_seq.xml +1 -0
  38. data/java/config/isa_configurator/transcription_micro.xml +1 -0
  39. data/java/config/isa_configurator/transcription_rtpcr.xml +1 -0
  40. data/java/config/isa_configurator/transcription_seq.xml +6 -0
  41. data/test/Rakefile +48 -0
  42. data/test/all.rb +3 -0
  43. data/test/authorization.rb +112 -0
  44. data/test/basic_rest.rb +98 -0
  45. data/test/data/invalid/BII-invalid.n3 +19641 -0
  46. data/test/data/invalid/a_TB-ACCUTOX-plate1.txt +97 -0
  47. data/test/data/invalid/a_TB-ACCUTOX-plate2.txt +97 -0
  48. data/test/data/invalid/a_TB-ACCUTOX-plate3.txt +97 -0
  49. data/test/data/invalid/acetaminophen-plate1-data.txt +97 -0
  50. data/test/data/invalid/acetaminophen-plate2-data.txt +97 -0
  51. data/test/data/invalid/acetaminophen-plate3-data.txt +97 -0
  52. data/test/data/invalid/i_Investigation.txt +156 -0
  53. data/test/data/invalid/ic50.txt +20 -0
  54. data/test/data/invalid/isa_TB_ACCUTOX.xls +0 -0
  55. data/test/data/invalid/isa_TB_ACCUTOX.zip +0 -0
  56. data/test/data/invalid/s_TB-ACCUTOX-acetaminophen.txt +58 -0
  57. data/test/data/valid/BII-I-1.n3 +19648 -0
  58. data/test/data/valid/BII-I-1.rdf +19648 -0
  59. data/test/data/valid/BII-I-1.zip +0 -0
  60. data/test/data/valid/isa-tab-renamed.zip +0 -0
  61. data/test/data/valid/isa_TB_BII.xls +0 -0
  62. data/test/httpd.rb +69 -0
  63. data/test/querytest.rb +42 -0
  64. data/test/upload.rb +152 -0
  65. data/test/xls_upload.rb +60 -0
  66. data/toxbank-investigation.gemspec +29 -0
  67. metadata +133 -0
data/test/data/invalid/a_TB-ACCUTOX-plate1.txt ADDED
@@ -0,0 +1,97 @@
1
+ Sample Name Characteristics[well] Factor Value[replicate] Protocol REF Assay Name Raw Data File Protocol REF Dose Response Name Derived Data File
2
+ VCb-plate1 A1 vcb1 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-A1 acetaminophen-plate1-data.txt none
3
+ VCb-plate1 A2 vcb2 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-A2 acetaminophen-plate1-data.txt none
4
+ C1b-plate1 A3 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate1-A3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
5
+ C2b-plate1 A4 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate1-A4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
6
+ C3b-plate1 A5 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate1-A5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
7
+ C4b-plate1 A6 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate1-A6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
8
+ C5b-plate1 A7 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate1-A7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
9
+ C6b-plate1 A8 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate1-A8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
10
+ C7b-plate1 A9 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate1-A9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
11
+ C8b-plate1 A10 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate1-A10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
12
+ VCb-plate1 A11 vcb3 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-A11 acetaminophen-plate1-data.txt none
13
+ VCb-plate1 A12 vcb4 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-A12 acetaminophen-plate1-data.txt none
14
+ VCb-plate1 B1 vcb5 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-B1 acetaminophen-plate1-data.txt none
15
+ VC1-plate1 B2 vc1_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-B2 acetaminophen-plate1-data.txt none
16
+ C1-plate1 B3 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-B3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
17
+ C2-plate1 B4 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-B4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
18
+ C3-plate1 B5 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-B5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
19
+ C4-plate1 B6 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-B6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
20
+ C5-plate1 B7 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-B7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
21
+ C6-plate1 B8 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-B8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
22
+ C7-plate1 B9 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-B9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
23
+ C8-plate1 B10 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-B10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
24
+ VC2-plate1 B11 vc2_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-B11 acetaminophen-plate1-data.txt none
25
+ VCb-plate1 B12 vcb6 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-B12 acetaminophen-plate1-data.txt none
26
+ VCb-plate1 C1 vcb7 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-C1 acetaminophen-plate1-data.txt none
27
+ VC1-plate1 C2 vc1_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-C2 acetaminophen-plate1-data.txt none
28
+ C1-plate1 C3 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-C3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
29
+ C2-plate1 C4 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-C4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
30
+ C3-plate1 C5 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-C5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
31
+ C4-plate1 C6 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-C6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
32
+ C5-plate1 C7 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-C7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
33
+ C6-plate1 C8 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-C8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
34
+ C7-plate1 C9 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-C9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
35
+ C8-plate1 C10 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-C10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
36
+ VC2-plate1 C11 vc2_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-C11 acetaminophen-plate1-data.txt none
37
+ VCb-plate1 C12 vcb8 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-C12 acetaminophen-plate1-data.txt none
38
+ VCb-plate1 D1 vcb9 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-D1 acetaminophen-plate1-data.txt none
39
+ VC1-plate1 D2 vc1_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-D2 acetaminophen-plate1-data.txt none
40
+ C1-plate1 D3 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-D3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
41
+ C2-plate1 D4 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-D4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
42
+ C3-plate1 D5 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-D5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
43
+ C4-plate1 D6 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-D6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
44
+ C5-plate1 D7 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-D7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
45
+ C6-plate1 D8 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-D8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
46
+ C7-plate1 D9 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-D9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
47
+ C8-plate1 D10 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-D10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
48
+ VC2-plate1 D11 vc2_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-D11 acetaminophen-plate1-data.txt none
49
+ VCb-plate1 D12 vcb10 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-D12 acetaminophen-plate1-data.txt none
50
+ VCb-plate1 E1 vcb11 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-E1 acetaminophen-plate1-data.txt none
51
+ VC1-plate1 E2 vc1_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-E2 acetaminophen-plate1-data.txt none
52
+ C1-plate1 E3 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-E3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
53
+ C2-plate1 E4 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-E4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
54
+ C3-plate1 E5 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-E5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
55
+ C4-plate1 E6 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-E6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
56
+ C5-plate1 E7 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-E7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
57
+ C6-plate1 E8 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-E8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
58
+ C7-plate1 E9 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-E9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
59
+ C8-plate1 E10 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-E10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
60
+ VC2-plate1 E11 vc2_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-E11 acetaminophen-plate1-data.txt none
61
+ VCb-plate1 E12 vcb12 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-E12 acetaminophen-plate1-data.txt none
62
+ VCb-plate1 F1 vcb13 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-F1 acetaminophen-plate1-data.txt none
63
+ VC1-plate1 F2 vc1_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-F2 acetaminophen-plate1-data.txt none
64
+ C1-plate1 F3 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-F3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
65
+ C2-plate1 F4 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-F4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
66
+ C3-plate1 F5 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-F5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
67
+ C4-plate1 F6 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-F6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
68
+ C5-plate1 F7 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-F7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
69
+ C6-plate1 F8 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-F8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
70
+ C7-plate1 F9 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-F9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
71
+ C8-plate1 F10 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-F10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
72
+ VC2-plate1 F11 vc2_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-F11 acetaminophen-plate1-data.txt none
73
+ VCb-plate1 F12 vcb14 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-F12 acetaminophen-plate1-data.txt none
74
+ VCb-plate1 G1 vcb15 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-G1 acetaminophen-plate1-data.txt none
75
+ VC1-plate1 G2 vc1_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate1-G2 acetaminophen-plate1-data.txt none
76
+ C1-plate1 G3 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate1-G3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
77
+ C2-plate1 G4 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate1-G4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
78
+ C3-plate1 G5 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate1-G5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
79
+ C4-plate1 G6 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate1-G6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
80
+ C5-plate1 G7 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate1-G7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
81
+ C6-plate1 G8 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate1-G8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
82
+ C7-plate1 G9 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate1-G9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
83
+ C8-plate1 G10 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate1-G10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
84
+ VC2-plate1 G11 vc2_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate1-G11 acetaminophen-plate1-data.txt none
85
+ VCb-plate1 G12 vcb16 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-G12 acetaminophen-plate1-data.txt none
86
+ VCb-plate1 H1 vcb17 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-H1 acetaminophen-plate1-data.txt none
87
+ VCb-plate1 H2 vcb18 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-H2 acetaminophen-plate1-data.txt none
88
+ C1b-plate1 H3 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate1-H3 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
89
+ C2b-plate1 H4 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate1-H4 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
90
+ C3b-plate1 H5 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate1-H5 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
91
+ C4b-plate1 H6 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate1-H6 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
92
+ C5b-plate1 H7 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate1-H7 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
93
+ C6b-plate1 H8 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate1-H8 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
94
+ C7b-plate1 H9 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate1-H9 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
95
+ C8b-plate1 H10 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate1-H10 acetaminophen-plate1-data.txt Hill function analysis acetaminophen-plate1-ic50 ic50.txt
96
+ VCb-plate1 H11 vcb19 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-H11 acetaminophen-plate1-data.txt none
97
+ VCb-plate1 H12 vcb20 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate1-H12 acetaminophen-plate1-data.txt none
data/test/data/invalid/a_TB-ACCUTOX-plate2.txt ADDED
@@ -0,0 +1,97 @@
1
+ Sample Name Characteristics[well] Factor Value[replicate] Protocol REF Assay Name Raw Data File Protocol REF Dose Response Name Derived Data File
2
+ VCb-plate2 A1 vcb1 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-A1 acetaminophen-plate2-data.txt none
3
+ VCb-plate2 A2 vcb2 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-A2 acetaminophen-plate2-data.txt none
4
+ C1b-plate2 A3 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate2-A3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
5
+ C2b-plate2 A4 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate2-A4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
6
+ C3b-plate2 A5 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate2-A5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
7
+ C4b-plate2 A6 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate2-A6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
8
+ C5b-plate2 A7 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate2-A7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
9
+ C6b-plate2 A8 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate2-A8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
10
+ C7b-plate2 A9 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate2-A9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
11
+ C8b-plate2 A10 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate2-A10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
12
+ VCb-plate2 A11 vcb3 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-A11 acetaminophen-plate2-data.txt none
13
+ VCb-plate2 A12 vcb4 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-A12 acetaminophen-plate2-data.txt none
14
+ VCb-plate2 B1 vcb5 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-B1 acetaminophen-plate2-data.txt none
15
+ VC1-plate2 B2 vc1_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-B2 acetaminophen-plate2-data.txt none
16
+ C1-plate2 B3 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-B3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
17
+ C2-plate2 B4 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-B4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
18
+ C3-plate2 B5 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-B5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
19
+ C4-plate2 B6 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-B6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
20
+ C5-plate2 B7 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-B7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
21
+ C6-plate2 B8 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-B8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
22
+ C7-plate2 B9 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-B9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
23
+ C8-plate2 B10 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-B10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
24
+ VC2-plate2 B11 vc2_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-B11 acetaminophen-plate2-data.txt none
25
+ VCb-plate2 B12 vcb6 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-B12 acetaminophen-plate2-data.txt none
26
+ VCb-plate2 C1 vcb7 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-C1 acetaminophen-plate2-data.txt none
27
+ VC1-plate2 C2 vc1_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-C2 acetaminophen-plate2-data.txt none
28
+ C1-plate2 C3 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-C3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
29
+ C2-plate2 C4 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-C4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
30
+ C3-plate2 C5 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-C5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
31
+ C4-plate2 C6 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-C6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
32
+ C5-plate2 C7 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-C7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
33
+ C6-plate2 C8 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-C8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
34
+ C7-plate2 C9 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-C9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
35
+ C8-plate2 C10 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-C10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
36
+ VC2-plate2 C11 vc2_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-C11 acetaminophen-plate2-data.txt none
37
+ VCb-plate2 C12 vcb8 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-C12 acetaminophen-plate2-data.txt none
38
+ VCb-plate2 D1 vcb9 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-D1 acetaminophen-plate2-data.txt none
39
+ VC1-plate2 D2 vc1_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-D2 acetaminophen-plate2-data.txt none
40
+ C1-plate2 D3 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-D3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
41
+ C2-plate2 D4 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-D4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
42
+ C3-plate2 D5 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-D5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
43
+ C4-plate2 D6 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-D6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
44
+ C5-plate2 D7 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-D7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
45
+ C6-plate2 D8 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-D8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
46
+ C7-plate2 D9 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-D9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
47
+ C8-plate2 D10 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-D10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
48
+ VC2-plate2 D11 vc2_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-D11 acetaminophen-plate2-data.txt none
49
+ VCb-plate2 D12 vcb10 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-D12 acetaminophen-plate2-data.txt none
50
+ VCb-plate2 E1 vcb11 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-E1 acetaminophen-plate2-data.txt none
51
+ VC1-plate2 E2 vc1_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-E2 acetaminophen-plate2-data.txt none
52
+ C1-plate2 E3 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-E3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
53
+ C2-plate2 E4 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-E4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
54
+ C3-plate2 E5 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-E5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
55
+ C4-plate2 E6 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-E6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
56
+ C5-plate2 E7 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-E7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
57
+ C6-plate2 E8 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-E8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
58
+ C7-plate2 E9 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-E9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
59
+ C8-plate2 E10 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-E10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
60
+ VC2-plate2 E11 vc2_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-E11 acetaminophen-plate2-data.txt none
61
+ VCb-plate2 E12 vcb12 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-E12 acetaminophen-plate2-data.txt none
62
+ VCb-plate2 F1 vcb13 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-F1 acetaminophen-plate2-data.txt none
63
+ VC1-plate2 F2 vc1_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-F2 acetaminophen-plate2-data.txt none
64
+ C1-plate2 F3 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-F3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
65
+ C2-plate2 F4 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-F4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
66
+ C3-plate2 F5 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-F5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
67
+ C4-plate2 F6 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-F6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
68
+ C5-plate2 F7 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-F7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
69
+ C6-plate2 F8 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-F8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
70
+ C7-plate2 F9 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-F9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
71
+ C8-plate2 F10 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-F10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
72
+ VC2-plate2 F11 vc2_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-F11 acetaminophen-plate2-data.txt none
73
+ VCb-plate2 F12 vcb14 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-F12 acetaminophen-plate2-data.txt none
74
+ VCb-plate2 G1 vcb15 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-G1 acetaminophen-plate2-data.txt none
75
+ VC1-plate2 G2 vc1_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate2-G2 acetaminophen-plate2-data.txt none
76
+ C1-plate2 G3 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate2-G3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
77
+ C2-plate2 G4 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate2-G4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
78
+ C3-plate2 G5 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate2-G5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
79
+ C4-plate2 G6 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate2-G6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
80
+ C5-plate2 G7 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate2-G7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
81
+ C6-plate2 G8 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate2-G8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
82
+ C7-plate2 G9 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate2-G9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
83
+ C8-plate2 G10 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate2-G10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
84
+ VC2-plate2 G11 vc2_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate2-G11 acetaminophen-plate2-data.txt none
85
+ VCb-plate2 G12 vcb16 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-G12 acetaminophen-plate2-data.txt none
86
+ VCb-plate2 H1 vcb17 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-H1 acetaminophen-plate2-data.txt none
87
+ VCb-plate2 H2 vcb18 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-H2 acetaminophen-plate2-data.txt none
88
+ C1b-plate2 H3 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate2-H3 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
89
+ C2b-plate2 H4 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate2-H4 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
90
+ C3b-plate2 H5 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate2-H5 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
91
+ C4b-plate2 H6 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate2-H6 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
92
+ C5b-plate2 H7 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate2-H7 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
93
+ C6b-plate2 H8 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate2-H8 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
94
+ C7b-plate2 H9 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate2-H9 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
95
+ C8b-plate2 H10 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate2-H10 acetaminophen-plate2-data.txt Hill function analysis acetaminophen-plate2-ic50 ic50.txt
96
+ VCb-plate2 H11 vcb19 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-H11 acetaminophen-plate2-data.txt none
97
+ VCb-plate2 H12 vcb20 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate2-H12 acetaminophen-plate2-data.txt none
data/test/data/invalid/a_TB-ACCUTOX-plate3.txt ADDED
@@ -0,0 +1,97 @@
1
+ Sample Name Characteristics[well] Factor Value[replicate] Protocol REF Assay Name Raw Data File Protocol REF Dose Response Name Derived Data File
2
+ VCb-plate3 A1 vcb1 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-A1 acetaminophen-plate3-data.txt none
3
+ VCb-plate3 A2 vcb2 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-A2 acetaminophen-plate3-data.txt none
4
+ C1b-plate3 A3 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate3-A3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
5
+ C2b-plate3 A4 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate3-A4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
6
+ C3b-plate3 A5 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate3-A5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
7
+ C4b-plate3 A6 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate3-A6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
8
+ C5b-plate3 A7 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate3-A7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
9
+ C6b-plate3 A8 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate3-A8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
10
+ C7b-plate3 A9 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate3-A9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
11
+ C8b-plate3 A10 b1 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate3-A10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
12
+ VCb-plate3 A11 vcb3 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-A11 acetaminophen-plate3-data.txt none
13
+ VCb-plate3 A12 vcb4 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-A12 acetaminophen-plate3-data.txt none
14
+ VCb-plate3 B1 vcb5 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-B1 acetaminophen-plate3-data.txt none
15
+ VC1-plate3 B2 vc1_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-B2 acetaminophen-plate3-data.txt none
16
+ C1-plate3 B3 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-B3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
17
+ C2-plate3 B4 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-B4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
18
+ C3-plate3 B5 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-B5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
19
+ C4-plate3 B6 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-B6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
20
+ C5-plate3 B7 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-B7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
21
+ C6-plate3 B8 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-B8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
22
+ C7-plate3 B9 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-B9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
23
+ C8-plate3 B10 r1 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-B10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
24
+ VC2-plate3 B11 vc2_1 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-B11 acetaminophen-plate3-data.txt none
25
+ VCb-plate3 B12 vcb6 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-B12 acetaminophen-plate3-data.txt none
26
+ VCb-plate3 C1 vcb7 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-C1 acetaminophen-plate3-data.txt none
27
+ VC1-plate3 C2 vc1_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-C2 acetaminophen-plate3-data.txt none
28
+ C1-plate3 C3 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-C3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
29
+ C2-plate3 C4 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-C4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
30
+ C3-plate3 C5 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-C5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
31
+ C4-plate3 C6 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-C6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
32
+ C5-plate3 C7 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-C7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
33
+ C6-plate3 C8 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-C8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
34
+ C7-plate3 C9 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-C9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
35
+ C8-plate3 C10 r2 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-C10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
36
+ VC2-plate3 C11 vc2_2 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-C11 acetaminophen-plate3-data.txt none
37
+ VCb-plate3 C12 vcb8 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-C12 acetaminophen-plate3-data.txt none
38
+ VCb-plate3 D1 vcb9 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-D1 acetaminophen-plate3-data.txt none
39
+ VC1-plate3 D2 vc1_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-D2 acetaminophen-plate3-data.txt none
40
+ C1-plate3 D3 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-D3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
41
+ C2-plate3 D4 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-D4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
42
+ C3-plate3 D5 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-D5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
43
+ C4-plate3 D6 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-D6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
44
+ C5-plate3 D7 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-D7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
45
+ C6-plate3 D8 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-D8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
46
+ C7-plate3 D9 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-D9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
47
+ C8-plate3 D10 r3 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-D10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
48
+ VC2-plate3 D11 vc2_3 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-D11 acetaminophen-plate3-data.txt none
49
+ VCb-plate3 D12 vcb10 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-D12 acetaminophen-plate3-data.txt none
50
+ VCb-plate3 E1 vcb11 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-E1 acetaminophen-plate3-data.txt none
51
+ VC1-plate3 E2 vc1_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-E2 acetaminophen-plate3-data.txt none
52
+ C1-plate3 E3 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-E3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
53
+ C2-plate3 E4 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-E4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
54
+ C3-plate3 E5 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-E5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
55
+ C4-plate3 E6 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-E6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
56
+ C5-plate3 E7 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-E7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
57
+ C6-plate3 E8 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-E8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
58
+ C7-plate3 E9 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-E9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
59
+ C8-plate3 E10 r4 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-E10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
60
+ VC2-plate3 E11 vc2_4 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-E11 acetaminophen-plate3-data.txt none
61
+ VCb-plate3 E12 vcb12 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-E12 acetaminophen-plate3-data.txt none
62
+ VCb-plate3 F1 vcb13 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-F1 acetaminophen-plate3-data.txt none
63
+ VC1-plate3 F2 vc1_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-F2 acetaminophen-plate3-data.txt none
64
+ C1-plate3 F3 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-F3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
65
+ C2-plate3 F4 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-F4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
66
+ C3-plate3 F5 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-F5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
67
+ C4-plate3 F6 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-F6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
68
+ C5-plate3 F7 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-F7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
69
+ C6-plate3 F8 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-F8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
70
+ C7-plate3 F9 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-F9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
71
+ C8-plate3 F10 r5 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-F10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
72
+ VC2-plate3 F11 vc2_5 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-F11 acetaminophen-plate3-data.txt none
73
+ VCb-plate3 F12 vcb14 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-F12 acetaminophen-plate3-data.txt none
74
+ VCb-plate3 G1 vcb15 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-G1 acetaminophen-plate3-data.txt none
75
+ VC1-plate3 G2 vc1_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC1-plate3-G2 acetaminophen-plate3-data.txt none
76
+ C1-plate3 G3 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C1-plate3-G3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
77
+ C2-plate3 G4 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C2-plate3-G4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
78
+ C3-plate3 G5 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C3-plate3-G5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
79
+ C4-plate3 G6 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C4-plate3-G6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
80
+ C5-plate3 G7 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C5-plate3-G7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
81
+ C6-plate3 G8 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C6-plate3-G8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
82
+ C7-plate3 G9 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C7-plate3-G9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
83
+ C8-plate3 G10 r6 Neutral Red Uptake (NRU) Cytotoxicity Test C8-plate3-G10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
84
+ VC2-plate3 G11 vc2_6 Neutral Red Uptake (NRU) Cytotoxicity Test VC2-plate3-G11 acetaminophen-plate3-data.txt none
85
+ VCb-plate3 G12 vcb16 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-G12 acetaminophen-plate3-data.txt none
86
+ VCb-plate3 H1 vcb17 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-H1 acetaminophen-plate3-data.txt none
87
+ VCb-plate3 H2 vcb18 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-H2 acetaminophen-plate3-data.txt none
88
+ C1b-plate3 H3 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C1b-plate3-H3 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
89
+ C2b-plate3 H4 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C2b-plate3-H4 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
90
+ C3b-plate3 H5 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C3b-plate3-H5 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
91
+ C4b-plate3 H6 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C4b-plate3-H6 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
92
+ C5b-plate3 H7 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C5b-plate3-H7 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
93
+ C6b-plate3 H8 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C6b-plate3-H8 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
94
+ C7b-plate3 H9 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C7b-plate3-H9 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
95
+ C8b-plate3 H10 b2 Neutral Red Uptake (NRU) Cytotoxicity Test C8b-plate3-H10 acetaminophen-plate3-data.txt Hill function analysis acetaminophen-plate3-ic50 ic50.txt
96
+ VCb-plate3 H11 vcb19 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-H11 acetaminophen-plate3-data.txt none
97
+ VCb-plate3 H12 vcb20 Neutral Red Uptake (NRU) Cytotoxicity Test VCb-plate3-H12 acetaminophen-plate3-data.txt none
data/test/data/invalid/acetaminophen-plate1-data.txt ADDED
@@ -0,0 +1,97 @@
1
+ Raw Data
2
+ C1b-plate1-A3
3
+ C1b-plate1-H3
4
+ C1-plate1-B3 0.3
5
+ C1-plate1-C3 0.0678
6
+ C1-plate1-D3 0.0
7
+ C1-plate1-E3 0.2272
8
+ C1-plate1-F3 0.2356
9
+ C1-plate1-G3 0.0
10
+ C2b-plate1-A4
11
+ C2b-plate1-H4
12
+ C2-plate1-B4 0.0
13
+ C2-plate1-C4 0.3472
14
+ C2-plate1-D4 0.1214
15
+ C2-plate1-E4 0.0
16
+ C2-plate1-F4 0.0
17
+ C2-plate1-G4 0.4015
18
+ C3b-plate1-A5
19
+ C3b-plate1-H5
20
+ C3-plate1-B5 0.179
21
+ C3-plate1-C5 0.4139
22
+ C3-plate1-D5 0.2149
23
+ C3-plate1-E5 0.8142
24
+ C3-plate1-F5 0.1056
25
+ C3-plate1-G5 0.1664
26
+ C4b-plate1-A6
27
+ C4b-plate1-H6
28
+ C4-plate1-B6 0.3355
29
+ C4-plate1-C6 0.4757
30
+ C4-plate1-D6 0.2348
31
+ C4-plate1-E6 0.0048
32
+ C4-plate1-F6 0.6365
33
+ C4-plate1-G6 0.3435
34
+ C5b-plate1-A7
35
+ C5b-plate1-H7
36
+ C5-plate1-B7 0.4925
37
+ C5-plate1-C7 0.6882
38
+ C5-plate1-D7 0.593
39
+ C5-plate1-E7 0.65
40
+ C5-plate1-F7 0.5711
41
+ C5-plate1-G7 0.7669
42
+ C6b-plate1-A8
43
+ C6b-plate1-H8
44
+ C6-plate1-B8 0.5185
45
+ C6-plate1-C8 0.8727
46
+ C6-plate1-D8 0.9901
47
+ C6-plate1-E8 0.8654
48
+ C6-plate1-F8 0.8512
49
+ C6-plate1-G8 0.6754
50
+ C7b-plate1-A9
51
+ C7b-plate1-H9
52
+ C7-plate1-B9 0.6429
53
+ C7-plate1-C9 0.7411
54
+ C7-plate1-D9 0.7374
55
+ C7-plate1-E9 1.1764
56
+ C7-plate1-F9 0.8433
57
+ C7-plate1-G9 0.9648
58
+ C8b-plate1-A10
59
+ C8b-plate1-H10
60
+ C8-plate1-B10 1.0378
61
+ C8-plate1-C10 1.1535
62
+ C8-plate1-D10 0.8948
63
+ C8-plate1-E10 1.0837
64
+ C8-plate1-F10 0.7808
65
+ C8-plate1-G10 1.0493
66
+ VC1-plate1-B2 1.0464
67
+ VC1-plate1-C2 0.9774
68
+ VC1-plate1-D2 0.9179
69
+ VC1-plate1-E2 0.8869
70
+ VC1-plate1-F2 0.8596
71
+ VC1-plate1-G2 1.1235
72
+ VC2-plate1-B11
73
+ VC2-plate1-C11
74
+ VC2-plate1-D11
75
+ VC2-plate1-E11
76
+ VC2-plate1-F11
77
+ VC2-plate1-G11
78
+ VCb-plate1-A1
79
+ VCb-plate1-A11
80
+ VCb-plate1-A12
81
+ VCb-plate1-A2
82
+ VCb-plate1-B1
83
+ VCb-plate1-B12
84
+ VCb-plate1-C1
85
+ VCb-plate1-C12
86
+ VCb-plate1-D1
87
+ VCb-plate1-D12
88
+ VCb-plate1-E1
89
+ VCb-plate1-E12
90
+ VCb-plate1-F1
91
+ VCb-plate1-F12
92
+ VCb-plate1-G1
93
+ VCb-plate1-G12
94
+ VCb-plate1-H1
95
+ VCb-plate1-H11
96
+ VCb-plate1-H12
97
+ VCb-plate1-H2
data/test/data/invalid/acetaminophen-plate2-data.txt ADDED
@@ -0,0 +1,97 @@
1
+ Assay Name Raw Data
2
+ C1b-plate1-A3
3
+ C1b-plate1-H3
4
+ C1-plate1-B3 0.302
5
+ C1-plate1-C3 0.0698
6
+ C1-plate1-D3 0.002
7
+ C1-plate1-E3 0.2292
8
+ C1-plate1-F3 0.2376
9
+ C1-plate1-G3 0.002
10
+ C2b-plate1-A4
11
+ C2b-plate1-H4
12
+ C2-plate1-B4 0.002
13
+ C2-plate1-C4 0.3492
14
+ C2-plate1-D4 0.1234
15
+ C2-plate1-E4 0.002
16
+ C2-plate1-F4 0.002
17
+ C2-plate1-G4 0.4035
18
+ C3b-plate1-A5
19
+ C3b-plate1-H5
20
+ C3-plate1-B5 0.181
21
+ C3-plate1-C5 0.4159
22
+ C3-plate1-D5 0.2169
23
+ C3-plate1-E5 0.8162
24
+ C3-plate1-F5 0.1076
25
+ C3-plate1-G5 0.1684
26
+ C4b-plate1-A6
27
+ C4b-plate1-H6
28
+ C4-plate1-B6 0.3375
29
+ C4-plate1-C6 0.4777
30
+ C4-plate1-D6 0.2368
31
+ C4-plate1-E6 0.0068
32
+ C4-plate1-F6 0.6385
33
+ C4-plate1-G6 0.3455
34
+ C5b-plate1-A7
35
+ C5b-plate1-H7
36
+ C5-plate1-B7 0.4945
37
+ C5-plate1-C7 0.6902
38
+ C5-plate1-D7 0.595
39
+ C5-plate1-E7 0.652
40
+ C5-plate1-F7 0.5731
41
+ C5-plate1-G7 0.7689
42
+ C6b-plate1-A8
43
+ C6b-plate1-H8
44
+ C6-plate1-B8 0.5205
45
+ C6-plate1-C8 0.8747
46
+ C6-plate1-D8 0.9921
47
+ C6-plate1-E8 0.8674
48
+ C6-plate1-F8 0.8532
49
+ C6-plate1-G8 0.6774
50
+ C7b-plate1-A9
51
+ C7b-plate1-H9
52
+ C7-plate1-B9 0.6449
53
+ C7-plate1-C9 0.7431
54
+ C7-plate1-D9 0.7394
55
+ C7-plate1-E9 1.1784
56
+ C7-plate1-F9 0.8453
57
+ C7-plate1-G9 0.9668
58
+ C8b-plate1-A10
59
+ C8b-plate1-H10
60
+ C8-plate1-B10 1.0398
61
+ C8-plate1-C10 1.1555
62
+ C8-plate1-D10 0.8968
63
+ C8-plate1-E10 1.0857
64
+ C8-plate1-F10 0.7828
65
+ C8-plate1-G10 1.0513
66
+ VC1-plate1-B2 1.0484
67
+ VC1-plate1-C2 0.9794
68
+ VC1-plate1-D2 0.9199
69
+ VC1-plate1-E2 0.8889
70
+ VC1-plate1-F2 0.8616
71
+ VC1-plate1-G2 1.1255
72
+ VC2-plate1-B11
73
+ VC2-plate1-C11
74
+ VC2-plate1-D11
75
+ VC2-plate1-E11
76
+ VC2-plate1-F11
77
+ VC2-plate1-G11
78
+ VCb-plate1-A1
79
+ VCb-plate1-A11
80
+ VCb-plate1-A12
81
+ VCb-plate1-A2
82
+ VCb-plate1-B1
83
+ VCb-plate1-B12
84
+ VCb-plate1-C1
85
+ VCb-plate1-C12
86
+ VCb-plate1-D1
87
+ VCb-plate1-D12
88
+ VCb-plate1-E1
89
+ VCb-plate1-E12
90
+ VCb-plate1-F1
91
+ VCb-plate1-F12
92
+ VCb-plate1-G1
93
+ VCb-plate1-G12
94
+ VCb-plate1-H1
95
+ VCb-plate1-H11
96
+ VCb-plate1-H12
97
+ VCb-plate1-H2
data/test/data/invalid/acetaminophen-plate3-data.txt ADDED
@@ -0,0 +1,97 @@
1
+ Assay Name Raw Data
2
+ C1b-plate1-A3
3
+ C1b-plate1-H3
4
+ C1-plate1-B3 0.3
5
+ C1-plate1-C3 0.0678
6
+ C1-plate1-D3 0.0
7
+ C1-plate1-E3 0.2272
8
+ C1-plate1-F3 0.2356
9
+ C1-plate1-G3 0.0
10
+ C2b-plate1-A4
11
+ C2b-plate1-H4
12
+ C2-plate1-B4 0.0
13
+ C2-plate1-C4 0.3472
14
+ C2-plate1-D4 0.1214
15
+ C2-plate1-E4 0.0
16
+ C2-plate1-F4 0.0
17
+ C2-plate1-G4 0.4015
18
+ C3b-plate1-A5
19
+ C3b-plate1-H5
20
+ C3-plate1-B5 0.179
21
+ C3-plate1-C5 0.4139
22
+ C3-plate1-D5 0.2149
23
+ C3-plate1-E5 0.8142
24
+ C3-plate1-F5 0.1056
25
+ C3-plate1-G5 0.1664
26
+ C4b-plate1-A6
27
+ C4b-plate1-H6
28
+ C4-plate1-B6 0.3355
29
+ C4-plate1-C6 0.4757
30
+ C4-plate1-D6 0.2348
31
+ C4-plate1-E6 0.0048
32
+ C4-plate1-F6 0.6365
33
+ C4-plate1-G6 0.3435
34
+ C5b-plate1-A7
35
+ C5b-plate1-H7
36
+ C5-plate1-B7 0.4925
37
+ C5-plate1-C7 0.6882
38
+ C5-plate1-D7 0.593
39
+ C5-plate1-E7 0.65
40
+ C5-plate1-F7 0.5711
41
+ C5-plate1-G7 0.7669
42
+ C6b-plate1-A8
43
+ C6b-plate1-H8
44
+ C6-plate1-B8 0.5185
45
+ C6-plate1-C8 0.8727
46
+ C6-plate1-D8 0.9901
47
+ C6-plate1-E8 0.8654
48
+ C6-plate1-F8 0.8512
49
+ C6-plate1-G8 0.6754
50
+ C7b-plate1-A9
51
+ C7b-plate1-H9
52
+ C7-plate1-B9 0.6429
53
+ C7-plate1-C9 0.7411
54
+ C7-plate1-D9 0.7374
55
+ C7-plate1-E9 1.1764
56
+ C7-plate1-F9 0.8433
57
+ C7-plate1-G9 0.9648
58
+ C8b-plate1-A10
59
+ C8b-plate1-H10
60
+ C8-plate1-B10 1.0378
61
+ C8-plate1-C10 1.1535
62
+ C8-plate1-D10 0.8948
63
+ C8-plate1-E10 1.0837
64
+ C8-plate1-F10 0.7808
65
+ C8-plate1-G10 1.0493
66
+ VC1-plate1-B2 1.0464
67
+ VC1-plate1-C2 0.9774
68
+ VC1-plate1-D2 0.9179
69
+ VC1-plate1-E2 0.8869
70
+ VC1-plate1-F2 0.8596
71
+ VC1-plate1-G2 1.1235
72
+ VC2-plate1-B11
73
+ VC2-plate1-C11
74
+ VC2-plate1-D11
75
+ VC2-plate1-E11
76
+ VC2-plate1-F11
77
+ VC2-plate1-G11
78
+ VCb-plate1-A1
79
+ VCb-plate1-A11
80
+ VCb-plate1-A12
81
+ VCb-plate1-A2
82
+ VCb-plate1-B1
83
+ VCb-plate1-B12
84
+ VCb-plate1-C1
85
+ VCb-plate1-C12
86
+ VCb-plate1-D1
87
+ VCb-plate1-D12
88
+ VCb-plate1-E1
89
+ VCb-plate1-E12
90
+ VCb-plate1-F1
91
+ VCb-plate1-F12
92
+ VCb-plate1-G1
93
+ VCb-plate1-G12
94
+ VCb-plate1-H1
95
+ VCb-plate1-H11
96
+ VCb-plate1-H12
97
+ VCb-plate1-H2