tomoto 0.2.2 → 0.2.3
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- checksums.yaml +4 -4
- data/CHANGELOG.md +4 -0
- data/ext/tomoto/ct.cpp +11 -11
- data/ext/tomoto/dmr.cpp +14 -13
- data/ext/tomoto/dt.cpp +14 -14
- data/ext/tomoto/ext.cpp +7 -7
- data/ext/tomoto/extconf.rb +1 -3
- data/ext/tomoto/gdmr.cpp +7 -7
- data/ext/tomoto/hdp.cpp +9 -9
- data/ext/tomoto/hlda.cpp +13 -13
- data/ext/tomoto/hpa.cpp +5 -5
- data/ext/tomoto/lda.cpp +42 -39
- data/ext/tomoto/llda.cpp +6 -6
- data/ext/tomoto/mglda.cpp +15 -15
- data/ext/tomoto/pa.cpp +6 -6
- data/ext/tomoto/plda.cpp +6 -6
- data/ext/tomoto/slda.cpp +8 -8
- data/ext/tomoto/utils.h +16 -70
- data/lib/tomoto/version.rb +1 -1
- data/vendor/tomotopy/README.kr.rst +57 -0
- data/vendor/tomotopy/README.rst +55 -0
- data/vendor/tomotopy/src/Labeling/Phraser.hpp +3 -3
- data/vendor/tomotopy/src/TopicModel/CTModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/DTModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +4 -4
- data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +2 -2
- data/vendor/tomotopy/src/TopicModel/LDA.h +3 -3
- data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +3 -3
- data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +34 -14
- data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +2 -2
- data/vendor/tomotopy/src/TopicModel/PAModel.hpp +1 -1
- data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/PTModel.hpp +5 -2
- data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +4 -1
- data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +48 -21
- data/vendor/tomotopy/src/Utils/AliasMethod.hpp +5 -4
- data/vendor/tomotopy/src/Utils/Dictionary.h +2 -2
- data/vendor/tomotopy/src/Utils/MultiNormalDistribution.hpp +1 -1
- data/vendor/tomotopy/src/Utils/TruncMultiNormal.hpp +1 -1
- data/vendor/tomotopy/src/Utils/math.h +2 -2
- data/vendor/tomotopy/src/Utils/serializer.hpp +30 -5
- metadata +6 -6
data/ext/tomoto/hpa.cpp
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
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#include <HPA.h>
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2
2
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3
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-
#include <rice/
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3
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+
#include <rice/rice.hpp>
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4
4
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5
5
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#include "utils.h"
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6
6
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7
7
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void init_hpa(Rice::Module& m) {
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8
8
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Rice::define_class_under<tomoto::IHPAModel, tomoto::IPAModel>(m, "HPA")
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9
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-
.
|
9
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+
.define_singleton_function(
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10
10
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"_new",
|
11
|
-
|
11
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+
[](size_t tw, size_t k1, size_t k2, tomoto::Float alpha, tomoto::Float eta, size_t seed) {
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12
12
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tomoto::HPAArgs args;
|
13
13
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args.k = k1;
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14
14
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args.k2 = k2;
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@@ -18,10 +18,10 @@ void init_hpa(Rice::Module& m) {
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18
18
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args.seed = seed;
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}
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20
20
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return tomoto::IHPAModel::create((tomoto::TermWeight)tw, false, args);
|
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-
})
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21
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+
}, Rice::Return().takeOwnership())
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22
22
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.define_method(
|
23
23
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"alpha",
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24
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-
|
24
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+
[](tomoto::IHPAModel& self) {
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25
25
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Array res;
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// use <= to return k+1 elements
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for (size_t i = 0; i <= self.getK(); i++) {
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data/ext/tomoto/lda.cpp
CHANGED
@@ -3,9 +3,7 @@
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3
3
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4
4
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#include <LDA.h>
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5
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6
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-
#include <rice/
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7
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-
#include <rice/Hash.hpp>
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8
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-
#include <rice/Module.hpp>
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6
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+
#include <rice/rice.hpp>
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9
7
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10
8
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#include "utils.h"
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11
9
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@@ -22,7 +20,7 @@ void init_lda(Rice::Module& m) {
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Rice::define_class_under<DocumentObject>(m, "Document")
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.define_method(
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"topics",
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-
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+
[](DocumentObject& self) {
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Rice::Hash res;
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auto topics = self.tm->getTopicsByDoc(self.doc);
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for (size_t i = 0; i < topics.size(); i++) {
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@@ -32,9 +30,9 @@ void init_lda(Rice::Module& m) {
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});
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31
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Rice::define_class_under<tomoto::ILDAModel>(m, "LDA")
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-
.
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+
.define_singleton_function(
|
36
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"_new",
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-
|
35
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+
[](size_t tw, size_t k, tomoto::Float alpha, tomoto::Float eta, size_t seed) {
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tomoto::LDAArgs args;
|
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args.k = k;
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38
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args.alpha = {alpha};
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@@ -43,10 +41,10 @@ void init_lda(Rice::Module& m) {
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args.seed = seed;
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}
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return tomoto::ILDAModel::create((tomoto::TermWeight)tw, args);
|
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-
})
|
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+
}, Rice::Return().takeOwnership())
|
47
45
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.define_method(
|
48
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"_add_doc",
|
49
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-
|
47
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+
[](tomoto::ILDAModel& self, std::vector<std::string> words) {
|
50
48
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return self.addDoc(buildDoc(words));
|
51
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})
|
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.define_method(
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@@ -75,7 +73,7 @@ void init_lda(Rice::Module& m) {
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})
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.define_method(
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"alpha",
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-
|
76
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+
[](tomoto::ILDAModel& self) {
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Array res;
|
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for (size_t i = 0; i < self.getK(); i++) {
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res.push(self.getAlpha(i));
|
@@ -84,18 +82,18 @@ void init_lda(Rice::Module& m) {
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})
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.define_method(
|
86
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"burn_in",
|
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-
|
85
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+
[](tomoto::ILDAModel& self) {
|
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return self.getBurnInIteration();
|
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})
|
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.define_method(
|
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"burn_in=",
|
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-
|
90
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+
[](tomoto::ILDAModel& self, size_t iteration) {
|
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self.setBurnInIteration(iteration);
|
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return iteration;
|
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93
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})
|
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.define_method(
|
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"_count_by_topics",
|
98
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-
|
96
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+
[](tomoto::ILDAModel& self) {
|
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Array res;
|
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98
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for (auto const& v : self.getCountByTopic()) {
|
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res.push(v);
|
@@ -104,32 +102,33 @@ void init_lda(Rice::Module& m) {
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})
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.define_method(
|
106
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"docs",
|
107
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-
|
105
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+
[](tomoto::ILDAModel& self) {
|
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Array res;
|
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auto n = self.getNumDocs();
|
110
108
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for (size_t i = 0; i < n; i++) {
|
111
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-
|
109
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+
auto v = DocumentObject(self.getDoc(i), &self);
|
110
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+
res.push(Object(Rice::detail::To_Ruby<DocumentObject>().convert(v)));
|
112
111
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}
|
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return res;
|
114
113
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})
|
115
114
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.define_method(
|
116
115
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"eta",
|
117
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-
|
116
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+
[](tomoto::ILDAModel& self) {
|
118
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return self.getEta();
|
119
118
|
})
|
120
119
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.define_method(
|
121
120
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"global_step",
|
122
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-
|
121
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+
[](tomoto::ILDAModel& self) {
|
123
122
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return self.getGlobalStep();
|
124
123
|
})
|
125
124
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.define_method(
|
126
125
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"k",
|
127
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-
|
126
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+
[](tomoto::ILDAModel& self) {
|
128
127
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return self.getK();
|
129
128
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})
|
130
129
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.define_method(
|
131
130
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"_load",
|
132
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-
|
131
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+
[](tomoto::ILDAModel& self, const char* filename) {
|
133
132
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std::ifstream str{ filename, std::ios_base::binary };
|
134
133
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if (!str) throw std::runtime_error{ std::string("cannot open file '") + filename + std::string("'") };
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135
134
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std::vector<uint8_t> extra_data;
|
@@ -137,48 +136,48 @@ void init_lda(Rice::Module& m) {
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137
136
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})
|
138
137
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.define_method(
|
139
138
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"ll_per_word",
|
140
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-
|
139
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+
[](tomoto::ILDAModel& self) {
|
141
140
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return self.getLLPerWord();
|
142
141
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})
|
143
142
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.define_method(
|
144
143
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"num_docs",
|
145
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-
|
144
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+
[](tomoto::ILDAModel& self) {
|
146
145
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return self.getNumDocs();
|
147
146
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})
|
148
147
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.define_method(
|
149
148
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"num_vocabs",
|
150
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-
|
149
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+
[](tomoto::ILDAModel& self) {
|
151
150
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return self.getV();
|
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})
|
153
152
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.define_method(
|
154
153
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"num_words",
|
155
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-
|
154
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+
[](tomoto::ILDAModel& self) {
|
156
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return self.getN();
|
157
156
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})
|
158
157
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.define_method(
|
159
158
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"optim_interval",
|
160
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-
|
159
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+
[](tomoto::ILDAModel& self) {
|
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return self.getOptimInterval();
|
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})
|
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.define_method(
|
164
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"optim_interval=",
|
165
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-
|
164
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+
[](tomoto::ILDAModel& self, size_t value) {
|
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self.setOptimInterval(value);
|
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return value;
|
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})
|
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.define_method(
|
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169
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"perplexity",
|
171
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-
|
170
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+
[](tomoto::ILDAModel& self) {
|
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return self.getPerplexity();
|
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})
|
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.define_method(
|
175
174
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"_prepare",
|
176
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-
|
175
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+
[](tomoto::ILDAModel& self, size_t minCnt, size_t minDf, size_t rmTop) {
|
177
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self.prepare(true, minCnt, minDf, rmTop);
|
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})
|
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.define_method(
|
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179
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"_removed_top_words",
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181
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-
|
180
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+
[](tomoto::ILDAModel& self, size_t rmTop) {
|
182
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Array res;
|
183
182
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auto dict = self.getVocabDict();
|
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size_t size = dict.size();
|
@@ -189,14 +188,14 @@ void init_lda(Rice::Module& m) {
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})
|
190
189
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.define_method(
|
191
190
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"_save",
|
192
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-
|
191
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+
[](tomoto::ILDAModel& self, const char* filename, bool full) {
|
193
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std::ofstream str{ filename, std::ios_base::binary };
|
194
193
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std::vector<uint8_t> extra_data;
|
195
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self.saveModel(str, full, &extra_data);
|
196
195
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})
|
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196
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.define_method(
|
198
197
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"_topic_words",
|
199
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-
|
198
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+
[](tomoto::ILDAModel& self, size_t topicId, size_t topN) {
|
200
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Rice::Hash res;
|
201
200
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for (auto const& v : self.getWordsByTopicSorted(topicId, topN)) {
|
202
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res[v.first] = v.second;
|
@@ -205,17 +204,17 @@ void init_lda(Rice::Module& m) {
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205
204
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})
|
206
205
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.define_method(
|
207
206
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"_train",
|
208
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-
|
207
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+
[](tomoto::ILDAModel& self, size_t iteration, size_t workers, size_t ps) {
|
209
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self.train(iteration, workers, (tomoto::ParallelScheme)ps);
|
210
209
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})
|
211
210
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.define_method(
|
212
211
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"_tw",
|
213
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-
|
212
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+
[](tomoto::ILDAModel& self) {
|
214
213
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return (int)self.getTermWeight();
|
215
214
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})
|
216
215
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.define_method(
|
217
216
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"used_vocab_df",
|
218
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-
|
217
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+
[](tomoto::ILDAModel& self) {
|
219
218
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auto vocab = self.getVocabDf();
|
220
219
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Array res;
|
221
220
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for (size_t i = 0; i < self.getV(); i++) {
|
@@ -225,7 +224,7 @@ void init_lda(Rice::Module& m) {
|
|
225
224
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})
|
226
225
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.define_method(
|
227
226
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"used_vocab_freq",
|
228
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-
|
227
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+
[](tomoto::ILDAModel& self) {
|
229
228
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auto vocab = self.getVocabCf();
|
230
229
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Array res;
|
231
230
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for (size_t i = 0; i < self.getV(); i++) {
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@@ -235,18 +234,20 @@ void init_lda(Rice::Module& m) {
|
|
235
234
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})
|
236
235
|
.define_method(
|
237
236
|
"used_vocabs",
|
238
|
-
|
237
|
+
[](tomoto::ILDAModel& self) {
|
239
238
|
auto dict = self.getVocabDict();
|
240
239
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Array res;
|
241
240
|
auto utf8 = Rice::Class(rb_cEncoding).call("const_get", "UTF_8");
|
242
241
|
for (size_t i = 0; i < self.getV(); i++) {
|
243
|
-
|
242
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+
VALUE value = Rice::detail::To_Ruby<std::string>().convert(dict.toWord(i));
|
243
|
+
Object obj(value);
|
244
|
+
res.push(obj.call("force_encoding", utf8));
|
244
245
|
}
|
245
246
|
return res;
|
246
247
|
})
|
247
248
|
.define_method(
|
248
249
|
"vocab_df",
|
249
|
-
|
250
|
+
[](tomoto::ILDAModel& self) {
|
250
251
|
auto vocab = self.getVocabDf();
|
251
252
|
Array res;
|
252
253
|
for (size_t i = 0; i < vocab.size(); i++) {
|
@@ -256,7 +257,7 @@ void init_lda(Rice::Module& m) {
|
|
256
257
|
})
|
257
258
|
.define_method(
|
258
259
|
"vocab_freq",
|
259
|
-
|
260
|
+
[](tomoto::ILDAModel& self) {
|
260
261
|
auto vocab = self.getVocabCf();
|
261
262
|
Array res;
|
262
263
|
for (size_t i = 0; i < vocab.size(); i++) {
|
@@ -266,12 +267,14 @@ void init_lda(Rice::Module& m) {
|
|
266
267
|
})
|
267
268
|
.define_method(
|
268
269
|
"vocabs",
|
269
|
-
|
270
|
+
[](tomoto::ILDAModel& self) {
|
270
271
|
auto dict = self.getVocabDict();
|
271
272
|
Array res;
|
272
273
|
auto utf8 = Rice::Class(rb_cEncoding).call("const_get", "UTF_8");
|
273
274
|
for (size_t i = 0; i < dict.size(); i++) {
|
274
|
-
|
275
|
+
VALUE value = Rice::detail::To_Ruby<std::string>().convert(dict.toWord(i));
|
276
|
+
Object obj(value);
|
277
|
+
res.push(obj.call("force_encoding", utf8));
|
275
278
|
}
|
276
279
|
return res;
|
277
280
|
});
|
data/ext/tomoto/llda.cpp
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
#include <LLDA.h>
|
2
2
|
|
3
|
-
#include <rice/
|
3
|
+
#include <rice/rice.hpp>
|
4
4
|
|
5
5
|
#include "utils.h"
|
6
6
|
|
7
7
|
void init_llda(Rice::Module& m) {
|
8
8
|
Rice::define_class_under<tomoto::ILLDAModel, tomoto::ILDAModel>(m, "LLDA")
|
9
|
-
.
|
9
|
+
.define_singleton_function(
|
10
10
|
"_new",
|
11
|
-
|
11
|
+
[](size_t tw, size_t k, tomoto::Float alpha, tomoto::Float eta, size_t seed) {
|
12
12
|
tomoto::LDAArgs args;
|
13
13
|
args.k = k;
|
14
14
|
args.alpha = {alpha};
|
@@ -17,17 +17,17 @@ void init_llda(Rice::Module& m) {
|
|
17
17
|
args.seed = seed;
|
18
18
|
}
|
19
19
|
return tomoto::ILLDAModel::create((tomoto::TermWeight)tw, args);
|
20
|
-
})
|
20
|
+
}, Rice::Return().takeOwnership())
|
21
21
|
.define_method(
|
22
22
|
"_add_doc",
|
23
|
-
|
23
|
+
[](tomoto::ILLDAModel& self, std::vector<std::string> words, std::vector<std::string> labels) {
|
24
24
|
auto doc = buildDoc(words);
|
25
25
|
doc.misc["labels"] = labels;
|
26
26
|
return self.addDoc(doc);
|
27
27
|
})
|
28
28
|
.define_method(
|
29
29
|
"topics_per_label",
|
30
|
-
|
30
|
+
[](tomoto::ILLDAModel& self) {
|
31
31
|
return self.getNumTopicsPerLabel();
|
32
32
|
});
|
33
33
|
}
|
data/ext/tomoto/mglda.cpp
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
#include <MGLDA.h>
|
2
2
|
|
3
|
-
#include <rice/
|
3
|
+
#include <rice/rice.hpp>
|
4
4
|
|
5
5
|
#include "utils.h"
|
6
6
|
|
7
7
|
void init_mglda(Rice::Module& m) {
|
8
8
|
Rice::define_class_under<tomoto::IMGLDAModel, tomoto::ILDAModel>(m, "MGLDA")
|
9
|
-
.
|
9
|
+
.define_singleton_function(
|
10
10
|
"_new",
|
11
|
-
|
11
|
+
[](size_t tw, size_t k_g, size_t k_l, size_t t, tomoto::Float alpha_g, tomoto::Float alpha_l, tomoto::Float alpha_mg, tomoto::Float alpha_ml, tomoto::Float eta_g) {
|
12
12
|
tomoto::MGLDAArgs args;
|
13
13
|
args.k = k_g;
|
14
14
|
args.kL = k_l;
|
@@ -20,62 +20,62 @@ void init_mglda(Rice::Module& m) {
|
|
20
20
|
args.eta = eta_g;
|
21
21
|
// TODO more args
|
22
22
|
return tomoto::IMGLDAModel::create((tomoto::TermWeight)tw, args);
|
23
|
-
})
|
23
|
+
}, Rice::Return().takeOwnership())
|
24
24
|
.define_method(
|
25
25
|
"_add_doc",
|
26
|
-
|
26
|
+
[](tomoto::IMGLDAModel& self, std::vector<std::string> words, std::string delimiter) {
|
27
27
|
auto doc = buildDoc(words);
|
28
28
|
doc.misc["delimiter"] = delimiter;
|
29
29
|
return self.addDoc(doc);
|
30
30
|
})
|
31
31
|
.define_method(
|
32
32
|
"alpha_g",
|
33
|
-
|
33
|
+
[](tomoto::IMGLDAModel& self) {
|
34
34
|
return self.getAlpha();
|
35
35
|
})
|
36
36
|
.define_method(
|
37
37
|
"alpha_l",
|
38
|
-
|
38
|
+
[](tomoto::IMGLDAModel& self) {
|
39
39
|
return self.getAlphaL();
|
40
40
|
})
|
41
41
|
.define_method(
|
42
42
|
"alpha_mg",
|
43
|
-
|
43
|
+
[](tomoto::IMGLDAModel& self) {
|
44
44
|
return self.getAlphaM();
|
45
45
|
})
|
46
46
|
.define_method(
|
47
47
|
"alpha_ml",
|
48
|
-
|
48
|
+
[](tomoto::IMGLDAModel& self) {
|
49
49
|
return self.getAlphaML();
|
50
50
|
})
|
51
51
|
.define_method(
|
52
52
|
"eta_g",
|
53
|
-
|
53
|
+
[](tomoto::IMGLDAModel& self) {
|
54
54
|
return self.getEta();
|
55
55
|
})
|
56
56
|
.define_method(
|
57
57
|
"eta_l",
|
58
|
-
|
58
|
+
[](tomoto::IMGLDAModel& self) {
|
59
59
|
return self.getEtaL();
|
60
60
|
})
|
61
61
|
.define_method(
|
62
62
|
"gamma",
|
63
|
-
|
63
|
+
[](tomoto::IMGLDAModel& self) {
|
64
64
|
return self.getGamma();
|
65
65
|
})
|
66
66
|
.define_method(
|
67
67
|
"k_g",
|
68
|
-
|
68
|
+
[](tomoto::IMGLDAModel& self) {
|
69
69
|
return self.getK();
|
70
70
|
})
|
71
71
|
.define_method(
|
72
72
|
"k_l",
|
73
|
-
|
73
|
+
[](tomoto::IMGLDAModel& self) {
|
74
74
|
return self.getKL();
|
75
75
|
})
|
76
76
|
.define_method(
|
77
77
|
"t",
|
78
|
-
|
78
|
+
[](tomoto::IMGLDAModel& self) {
|
79
79
|
return self.getT();
|
80
80
|
});
|
81
81
|
}
|
data/ext/tomoto/pa.cpp
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
#include <PA.h>
|
2
2
|
|
3
|
-
#include <rice/
|
3
|
+
#include <rice/rice.hpp>
|
4
4
|
|
5
5
|
#include "utils.h"
|
6
6
|
|
7
7
|
void init_pa(Rice::Module& m) {
|
8
8
|
Rice::define_class_under<tomoto::IPAModel, tomoto::ILDAModel>(m, "PA")
|
9
|
-
.
|
9
|
+
.define_singleton_function(
|
10
10
|
"_new",
|
11
|
-
|
11
|
+
[](size_t tw, size_t k1, size_t k2, tomoto::Float alpha, tomoto::Float eta, size_t seed) {
|
12
12
|
tomoto::PAArgs args;
|
13
13
|
args.k = k1;
|
14
14
|
args.k2 = k2;
|
@@ -18,15 +18,15 @@ void init_pa(Rice::Module& m) {
|
|
18
18
|
args.seed = seed;
|
19
19
|
}
|
20
20
|
return tomoto::IPAModel::create((tomoto::TermWeight)tw, args);
|
21
|
-
})
|
21
|
+
}, Rice::Return().takeOwnership())
|
22
22
|
.define_method(
|
23
23
|
"k1",
|
24
|
-
|
24
|
+
[](tomoto::IPAModel& self) {
|
25
25
|
return self.getK();
|
26
26
|
})
|
27
27
|
.define_method(
|
28
28
|
"k2",
|
29
|
-
|
29
|
+
[](tomoto::IPAModel& self) {
|
30
30
|
return self.getK2();
|
31
31
|
});
|
32
32
|
}
|