RubyGems - togezo - Versions diffs - 0.0.1 - Mend

togezo 0.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (16) hide show

checksums.yaml ADDED

@@ -0,0 +1,7 @@
+---
+SHA1:
+  metadata.gz: 9c6a839255715bf9c7c9d7b558220ae81f4d85ea
+  data.tar.gz: 84f3ad8e1f6758e01f44812afbc2f12e6b15980d
+SHA512:
+  metadata.gz: 3c69585db2d9db500f4b477dc7b56be8fadd5106b18e2e1acf97eb7b6c303d6623394ee11e910faa7e14ad4561923bb13d35b0163a30bf20587b5c286a83d0b1
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data/.gitignore ADDED

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+/.bundle/
+/.yardoc
+/Gemfile.lock
+/_yardoc/
+/coverage/
+/doc/
+/pkg/
+/spec/reports/
+/tmp/

data/.rspec ADDED

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1	+ --format documentation
2	+ --color

data/.travis.yml ADDED

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+language: ruby
+rvm:
+  - 2.1.2
+before_install: gem install bundler -v 1.10.6

data/Gemfile ADDED

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+source 'https://rubygems.org'
+# Specify your gem's dependencies in togezo.gemspec
+gemspec

data/README.md ADDED

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+# Togezo
+This is a gem for getting extreme values on a chart via Gaussian/Pearson.
+## Installation
+    $ gem install togezo
+## Usage
+    togezo = Togezo.init("hoge.dat")
+    peaks = togezo.fit
+    p peaks
+## Contributing
+Bug reports and pull requests are welcome on GitHub at https://github.com/deepneko/togezo.

data/Rakefile ADDED

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+require "bundler/gem_tasks"
+require "rspec/core/rake_task"
+RSpec::Core::RakeTask.new(:spec)
+task :default => :spec

data/bin/console ADDED

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+#!/usr/bin/env ruby
+require "bundler/setup"
+require "togezo"
+# You can add fixtures and/or initialization code here to make experimenting
+# with your gem easier. You can also use a different console, if you like.
+# (If you use this, don't forget to add pry to your Gemfile!)
+# require "pry"
+# Pry.start
+require "irb"
+IRB.start

data/bin/setup ADDED

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+#!/bin/bash
+set -euo pipefail
+IFS=$'\n\t'
+bundle install
+# Do any other automated setup that you need to do here

data/lib/togezo.rb ADDED

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+require 'pty'
+require 'expect'
+require 'tempfile'
+module Togezo
+  GAUSSIAN = 0
+  PEARSON = 1
+  def self.init(filename, debug=false)
+    Togezo.new(filename, debug)
+  end
+  class Togezo
+    attr_accessor :debug
+    attr_reader :positives, :negatives, :peaks
+    def initialize(filename, debug=false)
+      @datafile = File.open(filename)
+      @constant = nil
+      @positives = []
+      @negatives = []
+      @peaks = []
+    end
+    def fit(function=GAUSSIAN, times=1)
+      if function = GAUSSIAN
+        guess = "Gaussian"
+      elsif function = @PEARSON
+        guess = "Pearson"
+      end
+      PTY.spawn("cfityk") do |r, w, pid|
+        w.puts "@0 < #{@datafile.path};"
+        w.puts "guess Constant;"
+        w.puts "info peaks;"
+        r.sync = true
+        r.expect(/\%_1\s+Constant(\sx){4}\s+(\d+(\.\d+)*)\s/, 3) do |line|
+          @constant = line[2].to_f
+        end
+        1.upto(times) do |i|
+          w.puts "guess #{guess}"
+        end
+        w.puts "info peaks"
+        2.upto(times+1) do |i|
+          r.expect(/\%_#{i}\s+#{guess}(\s+\d+(\.\d+)*)(\s+\d+(\.\d+)*)\s/, 3) do |line|
+            x = line[1].to_f
+            y = line[3].to_f
+            @positives << [x, y]
+          end
+        end
+        w.close
+        r.close
+      end
+      negatives = Tempfile.new("temp")
+      @datafile.each_line do |line|
+        x, y = line.split(/\s/).map{|m| m.to_f}
+        if y < @constant
+          new_y = (@constant - y) + @constant
+          negatives.puts "#{x} #{new_y}"
+        end
+      end
+      negatives.flush
+      negatives.rewind
+      PTY.spawn("cfityk") do |r, w, pid|
+        w.puts "@0 < #{negatives.path};"
+        w.puts "guess Constant(a=#{@constant});"
+        1.upto(times) do |i|
+          w.puts "guess #{guess}"
+        end
+        w.puts "info peaks"
+        2.upto(times+1) do |i|
+          r.expect(/\%_#{i}\s+#{guess}(\s+\d+(\.\d+)*)(\s+\d+(\.\d+)*)\s/, 3) do |line|
+            x = line[1].to_f
+            y = line[3].to_f
+            @negatives << [x, y]
+          end
+        end
+        w.close
+        r.close
+      end
+      @positives.each do |x, y|
+        @peaks << [x, (y+@constant).round(5)]
+      end
+      @negatives.each do |x, y|
+        @peaks << [x, (@constant-y).round(5)]
+      end
+      @peaks.sort!
+    end
+  end
+end

data/lib/togezo/version.rb ADDED

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+module Togezo
+  VERSION = "0.0.1"
+end

data/sample/sample.dat ADDED

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+1 46.177
+2 46.168
+3 46.157
+4 46.151
+5 46.144
+6 46.138
+7 46.135
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data/sample/sample.rb ADDED

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+require 'togezo'
+togezo = Togezo.init(ARGV[0])
+p togezo.fit(Togezo::GAUSSIAN, 5)
+p togezo.positives
+p togezo.negatives

data/togezo-0.1.0.gem ADDED

Binary file

data/togezo.gemspec ADDED

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+# coding: utf-8
+lib = File.expand_path('../lib', __FILE__)
+$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
+require 'togezo/version'
+Gem::Specification.new do |spec|
+  spec.name          = "togezo"
+  spec.version       = Togezo::VERSION
+  spec.authors       = ["deepneko"]
+  spec.email         = ["deep.inu@gmail.com"]
+  spec.summary       = %q{Togezo provides extreme values on a chart via Gaussian/Pearson.}
+  spec.homepage      = "https://github.com/deepneko/togezo"
+  # Prevent pushing this gem to RubyGems.org by setting 'allowed_push_host', or
+  # delete this section to allow pushing this gem to any host.
+  #if spec.respond_to?(:metadata)
+  #  spec.metadata['allowed_push_host'] = "TODO: Set to 'http://mygemserver.com'"
+  #else
+  #  raise "RubyGems 2.0 or newer is required to protect against public gem pushes."
+  #end
+  spec.files         = `git ls-files -z`.split("\x0").reject { |f| f.match(%r{^(test|spec|features)/}) }
+  spec.bindir        = "exe"
+  spec.executables   = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
+  spec.require_paths = ["lib"]
+  spec.add_development_dependency "bundler", "~> 1.10"
+  #spec.add_development_dependency "rake", "~> 10.0"
+  spec.add_development_dependency "rspec"
+end

metadata ADDED

@@ -0,0 +1,85 @@
+--- !ruby/object:Gem::Specification
+name: togezo
+version: !ruby/object:Gem::Version
+  version: 0.0.1
+platform: ruby
+authors:
+- deepneko
+autorequire:
+bindir: exe
+cert_chain: []
+date: 2015-11-12 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.10'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.10'
+- !ruby/object:Gem::Dependency
+  name: rspec
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+description:
+email:
+- deep.inu@gmail.com
+executables: []
+extensions: []
+extra_rdoc_files: []
+files:
+- ".gitignore"
+- ".rspec"
+- ".travis.yml"
+- Gemfile
+- README.md
+- Rakefile
+- bin/console
+- bin/setup
+- lib/togezo.rb
+- lib/togezo/version.rb
+- sample/sample.dat
+- sample/sample.rb
+- togezo-0.1.0.gem
+- togezo.gemspec
+homepage: https://github.com/deepneko/togezo
+licenses: []
+metadata: {}
+post_install_message:
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project:
+rubygems_version: 2.4.8
+signing_key:
+specification_version: 4
+summary: Togezo provides extreme values on a chart via Gaussian/Pearson.
+test_files: []