taxamatch_rb 0.9.8 → 0.9.9
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- data/Gemfile +2 -2
- data/Gemfile.lock +46 -43
- data/README.rdoc +5 -6
- data/VERSION +1 -1
- data/taxamatch_rb.gemspec +9 -9
- metadata +10 -10
data/Gemfile
CHANGED
@@ -2,7 +2,7 @@ source "http://rubygems.org"
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2
2
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require 'yaml'
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3
3
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# YAML::ENGINE.yamler= 'syck'
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4
4
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5
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-
gem "biodiversity19","
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5
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+
gem "biodiversity19","~> 2.1"
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6
6
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gem "damerau-levenshtein", ">= 0.5.4"
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7
7
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8
8
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@@ -11,7 +11,7 @@ group :development do
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gem "rake-compiler"
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gem "rspec"
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13
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gem "cucumber", ">= 0"
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14
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-
gem "bundler", "~> 1.
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14
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+
gem "bundler", "~> 1.3"
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15
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gem "jeweler", "~> 1.6.0"
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gem "debugger"
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gem "ruby-prof"
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data/Gemfile.lock
CHANGED
@@ -1,63 +1,66 @@
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1
1
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GEM
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2
2
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remote: http://rubygems.org/
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3
3
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specs:
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4
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-
activesupport (3.2.
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5
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-
i18n (
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4
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+
activesupport (3.2.13)
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5
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+
i18n (= 0.6.1)
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6
6
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multi_json (~> 1.0)
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7
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-
biodiversity19 (
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7
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+
biodiversity19 (2.1.0)
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8
8
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parallel
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9
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-
parallel
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10
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-
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9
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parallel (~> 0.6)
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10
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+
rake (~> 10.0)
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11
11
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treetop
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12
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-
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13
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-
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12
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treetop (~> 1.4)
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13
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+
unicode_utils (~> 1.4)
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14
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builder (3.2.0)
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14
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columnize (0.3.6)
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15
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-
cucumber (1.
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+
cucumber (1.3.1)
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17
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builder (>= 2.1.2)
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diff-lcs (>= 1.1.3)
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18
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-
gherkin (~> 2.
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19
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-
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20
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-
damerau-levenshtein (0.
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21
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-
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19
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+
gherkin (~> 2.12.0)
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20
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+
multi_json (~> 1.3)
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21
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+
damerau-levenshtein (1.0.0)
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22
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+
bundler (~> 1)
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23
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+
jeweler (~> 1)
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24
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+
rake (~> 10)
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25
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+
rake-compiler (~> 0.8)
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26
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+
debugger (1.5.0)
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22
27
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columnize (>= 0.3.1)
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23
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-
debugger-linecache (~> 1.
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24
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-
debugger-ruby_core_source (~> 1.
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25
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-
debugger-linecache (1.
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26
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-
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-
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-
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-
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-
json (>= 1.4.6)
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+
debugger-linecache (~> 1.2.0)
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+
debugger-ruby_core_source (~> 1.2.0)
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30
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+
debugger-linecache (1.2.0)
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+
debugger-ruby_core_source (1.2.0)
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+
diff-lcs (1.2.4)
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33
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+
gherkin (2.12.0)
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34
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+
multi_json (~> 1.3)
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31
35
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git (1.2.5)
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32
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-
i18n (0.6.
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36
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+
i18n (0.6.1)
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33
37
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jeweler (1.6.4)
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34
38
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bundler (~> 1.0)
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35
39
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git (>= 1.2.5)
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36
40
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rake
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37
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-
json (1.7.3)
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38
41
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metaclass (0.0.1)
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39
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-
mocha (0.
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42
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+
mocha (0.13.3)
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40
43
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metaclass (~> 0.0.1)
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41
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-
multi_json (1.3
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42
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-
parallel (0.
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44
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+
multi_json (1.7.3)
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45
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parallel (0.6.4)
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43
46
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polyglot (0.3.3)
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44
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-
rake (0.
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45
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-
rake-compiler (0.8.
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+
rake (10.0.4)
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48
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+
rake-compiler (0.8.3)
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46
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rake
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47
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-
rspec (2.
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48
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-
rspec-core (~> 2.
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49
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-
rspec-expectations (~> 2.
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50
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-
rspec-mocks (~> 2.
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51
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-
rspec-core (2.
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52
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-
rspec-expectations (2.
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53
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-
diff-lcs (
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54
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-
rspec-mocks (2.
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55
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-
ruby-prof (0.
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56
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-
shoulda (3.
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57
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-
shoulda-context (~> 1.0)
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58
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-
shoulda-matchers (
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59
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-
shoulda-context (1.
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60
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-
shoulda-matchers (1.
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50
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+
rspec (2.13.0)
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51
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+
rspec-core (~> 2.13.0)
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52
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+
rspec-expectations (~> 2.13.0)
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53
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+
rspec-mocks (~> 2.13.0)
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54
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+
rspec-core (2.13.1)
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55
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+
rspec-expectations (2.13.0)
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56
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+
diff-lcs (>= 1.1.3, < 2.0)
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57
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+
rspec-mocks (2.13.1)
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58
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+
ruby-prof (0.13.0)
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59
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+
shoulda (3.5.0)
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60
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+
shoulda-context (~> 1.0, >= 1.0.1)
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61
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+
shoulda-matchers (>= 1.4.1, < 3.0)
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62
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+
shoulda-context (1.1.1)
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63
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+
shoulda-matchers (2.1.0)
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61
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activesupport (>= 3.0.0)
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62
65
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treetop (1.4.12)
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63
66
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polyglot
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@@ -68,8 +71,8 @@ PLATFORMS
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ruby
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72
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DEPENDENCIES
|
71
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-
biodiversity19 (
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72
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-
bundler (~> 1.
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74
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+
biodiversity19 (~> 2.1)
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75
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+
bundler (~> 1.3)
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73
76
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cucumber
|
74
77
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damerau-levenshtein (>= 0.5.4)
|
75
78
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debugger
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data/README.rdoc
CHANGED
@@ -8,9 +8,9 @@ The purpose of Taxamatch gem is to facilitate fuzzy comparison of two scientific
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8
8
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tm = Taxamatch::Base.new
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9
9
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tm.taxamatch('Homo sapien', 'Homo sapiens') #returns true
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10
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tm.taxamatch('Homo sapiens Linnaeus', 'Hommo sapens (Linn. 1758)') #returns true
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11
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-
tm.taxamatch('Homo sapiens Mozzherin', 'Homo sapiens Linnaeus') #returns false
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+
tm.taxamatch('Homo sapiens Mozzherin', 'Homo sapiens Linnaeus') #returns false
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12
12
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13
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-
Taxamatch_Rb is compatible with ruby versions 1.
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+
Taxamatch_Rb is compatible with ruby versions 1.9.1 and higher
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== Installation
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@@ -18,11 +18,10 @@ Taxamatch_Rb is compatible with ruby versions 1.8.7 and 1.9.1 and higher
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== Usage
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-
require 'rubygems' #not needed for ruby > 1.9.1
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require 'taxamatch_rb'
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22
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tm = Taxamatch::Base.new
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25
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-
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+
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* compare full scientific names
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tm.taxamatch('Hommo sapiens L.', 'Homo sapiens Linnaeus')
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@@ -38,11 +37,11 @@ Taxamatch_Rb is compatible with ruby versions 1.8.7 and 1.9.1 and higher
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tm.taxamatch_preparsed(parsed_name1, parsed_name2)
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39
38
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* compare genera
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41
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-
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40
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+
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tm.match_genera('Monacanthus', 'MONOCANTUS')
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* compare species
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45
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-
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+
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tm.match_species('fronticinctus', 'frontecinctus')
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* compare authors and years
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
0.9.
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1
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+
0.9.9
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data/taxamatch_rb.gemspec
CHANGED
@@ -5,11 +5,11 @@
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5
5
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6
6
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Gem::Specification.new do |s|
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7
7
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s.name = "taxamatch_rb"
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8
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-
s.version = "0.9.
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8
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+
s.version = "0.9.9"
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9
9
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10
10
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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11
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s.authors = ["Dmitry Mozzherin"]
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-
s.date = "
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+
s.date = "2013-05-07"
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s.description = "This gem implements algorithm for fuzzy matching scientific names developed by Tony Rees"
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s.email = "dmozzherin@eol.org"
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s.extra_rdoc_files = [
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@@ -38,33 +38,33 @@ Gem::Specification.new do |s|
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38
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]
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39
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s.homepage = "http://github.com/GlobalNamesArchitecture/taxamatch_rb"
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40
40
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s.require_paths = ["lib"]
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41
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-
s.rubygems_version = "1.8.
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+
s.rubygems_version = "1.8.25"
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42
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s.summary = "Implementation of Tony Rees Taxamatch algorithms"
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43
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44
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if s.respond_to? :specification_version then
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s.specification_version = 3
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if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
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48
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-
s.add_runtime_dependency(%q<biodiversity19>, ["
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48
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+
s.add_runtime_dependency(%q<biodiversity19>, ["~> 2.1"])
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49
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s.add_runtime_dependency(%q<damerau-levenshtein>, [">= 0.5.4"])
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s.add_development_dependency(%q<rake>, [">= 0"])
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s.add_development_dependency(%q<rake-compiler>, [">= 0"])
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s.add_development_dependency(%q<rspec>, [">= 0"])
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s.add_development_dependency(%q<cucumber>, [">= 0"])
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-
s.add_development_dependency(%q<bundler>, ["~> 1.
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+
s.add_development_dependency(%q<bundler>, ["~> 1.3"])
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55
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s.add_development_dependency(%q<jeweler>, ["~> 1.6.0"])
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56
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s.add_development_dependency(%q<debugger>, [">= 0"])
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s.add_development_dependency(%q<ruby-prof>, [">= 0"])
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s.add_development_dependency(%q<shoulda>, [">= 0"])
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s.add_development_dependency(%q<mocha>, [">= 0"])
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else
|
61
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-
s.add_dependency(%q<biodiversity19>, ["
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+
s.add_dependency(%q<biodiversity19>, ["~> 2.1"])
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s.add_dependency(%q<damerau-levenshtein>, [">= 0.5.4"])
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s.add_dependency(%q<rake>, [">= 0"])
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s.add_dependency(%q<rake-compiler>, [">= 0"])
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s.add_dependency(%q<rspec>, [">= 0"])
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s.add_dependency(%q<cucumber>, [">= 0"])
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-
s.add_dependency(%q<bundler>, ["~> 1.
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+
s.add_dependency(%q<bundler>, ["~> 1.3"])
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s.add_dependency(%q<jeweler>, ["~> 1.6.0"])
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s.add_dependency(%q<debugger>, [">= 0"])
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s.add_dependency(%q<ruby-prof>, [">= 0"])
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@@ -72,13 +72,13 @@ Gem::Specification.new do |s|
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s.add_dependency(%q<mocha>, [">= 0"])
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end
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else
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75
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-
s.add_dependency(%q<biodiversity19>, ["
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+
s.add_dependency(%q<biodiversity19>, ["~> 2.1"])
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s.add_dependency(%q<damerau-levenshtein>, [">= 0.5.4"])
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s.add_dependency(%q<rake>, [">= 0"])
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s.add_dependency(%q<rake-compiler>, [">= 0"])
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s.add_dependency(%q<rspec>, [">= 0"])
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s.add_dependency(%q<cucumber>, [">= 0"])
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81
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-
s.add_dependency(%q<bundler>, ["~> 1.
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+
s.add_dependency(%q<bundler>, ["~> 1.3"])
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s.add_dependency(%q<jeweler>, ["~> 1.6.0"])
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s.add_dependency(%q<debugger>, [">= 0"])
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s.add_dependency(%q<ruby-prof>, [">= 0"])
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metadata
CHANGED
@@ -1,7 +1,7 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: taxamatch_rb
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3
3
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version: !ruby/object:Gem::Version
|
4
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-
version: 0.9.
|
4
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+
version: 0.9.9
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5
5
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prerelease:
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6
6
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platform: ruby
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7
7
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authors:
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@@ -9,24 +9,24 @@ authors:
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9
9
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autorequire:
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10
10
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bindir: bin
|
11
11
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cert_chain: []
|
12
|
-
date:
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12
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+
date: 2013-05-07 00:00:00.000000000 Z
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13
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dependencies:
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14
14
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- !ruby/object:Gem::Dependency
|
15
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name: biodiversity19
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16
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requirement: !ruby/object:Gem::Requirement
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none: false
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18
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requirements:
|
19
|
-
- -
|
19
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+
- - ~>
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20
20
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- !ruby/object:Gem::Version
|
21
|
-
version:
|
21
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+
version: '2.1'
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22
22
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type: :runtime
|
23
23
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prerelease: false
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24
24
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version_requirements: !ruby/object:Gem::Requirement
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25
25
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none: false
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26
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requirements:
|
27
|
-
- -
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27
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+
- - ~>
|
28
28
|
- !ruby/object:Gem::Version
|
29
|
-
version:
|
29
|
+
version: '2.1'
|
30
30
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- !ruby/object:Gem::Dependency
|
31
31
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name: damerau-levenshtein
|
32
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requirement: !ruby/object:Gem::Requirement
|
@@ -114,7 +114,7 @@ dependencies:
|
|
114
114
|
requirements:
|
115
115
|
- - ~>
|
116
116
|
- !ruby/object:Gem::Version
|
117
|
-
version: 1.
|
117
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+
version: '1.3'
|
118
118
|
type: :development
|
119
119
|
prerelease: false
|
120
120
|
version_requirements: !ruby/object:Gem::Requirement
|
@@ -122,7 +122,7 @@ dependencies:
|
|
122
122
|
requirements:
|
123
123
|
- - ~>
|
124
124
|
- !ruby/object:Gem::Version
|
125
|
-
version: 1.
|
125
|
+
version: '1.3'
|
126
126
|
- !ruby/object:Gem::Dependency
|
127
127
|
name: jeweler
|
128
128
|
requirement: !ruby/object:Gem::Requirement
|
@@ -244,7 +244,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
244
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|
version: '0'
|
245
245
|
segments:
|
246
246
|
- 0
|
247
|
-
hash:
|
247
|
+
hash: 1219096390958000283
|
248
248
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
249
249
|
none: false
|
250
250
|
requirements:
|
@@ -253,7 +253,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
253
253
|
version: '0'
|
254
254
|
requirements: []
|
255
255
|
rubyforge_project:
|
256
|
-
rubygems_version: 1.8.
|
256
|
+
rubygems_version: 1.8.25
|
257
257
|
signing_key:
|
258
258
|
specification_version: 3
|
259
259
|
summary: Implementation of Tony Rees Taxamatch algorithms
|