taverna-player 0.8.0 → 0.9.0

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Files changed (53) hide show
  1. checksums.yaml +8 -8
  2. data/.travis.yml +6 -0
  3. data/CHANGES.rdoc +28 -0
  4. data/CITATION +20 -0
  5. data/Gemfile +0 -12
  6. data/README.rdoc +30 -16
  7. data/Rakefile +1 -0
  8. data/app/controllers/taverna_player/workflows_controller.rb +18 -0
  9. data/app/helpers/taverna_player/application_helper.rb +2 -2
  10. data/app/models/taverna_player/run.rb +35 -3
  11. data/app/models/taverna_player/workflow.rb +41 -0
  12. data/app/views/taverna_player/workflows/_info.json.jbuilder +1 -0
  13. data/{test/dummy/app/views → app/views/taverna_player}/workflows/index.html.erb +1 -1
  14. data/app/views/taverna_player/workflows/index.json.jbuilder +1 -0
  15. data/config/routes.rb +9 -0
  16. data/db/migrate/20140917165505_create_taverna_player_workflows.rb +12 -0
  17. data/lib/generators/taverna_player/controllers_generator.rb +5 -6
  18. data/lib/generators/taverna_player/models_generator.rb +3 -3
  19. data/lib/generators/templates/callbacks/worker_callbacks.rb +5 -5
  20. data/{test/dummy/app → lib/generators/templates}/controllers/workflows_controller.rb +7 -4
  21. data/{test/dummy/test/functional/workflows_controller_test.rb → lib/generators/templates/models/workflow.rb} +6 -7
  22. data/lib/generators/templates/player_initializer.rb +5 -4
  23. data/lib/taverna-player.rb +11 -1
  24. data/lib/taverna_player/concerns/controllers/runs_controller.rb +1 -1
  25. data/lib/taverna_player/concerns/controllers/workflows_controller.rb +41 -0
  26. data/lib/taverna_player/concerns/models/run.rb +42 -14
  27. data/lib/taverna_player/concerns/models/run_port.rb +2 -1
  28. data/lib/taverna_player/concerns/models/workflow.rb +44 -0
  29. data/lib/taverna_player/model_proxy.rb +14 -8
  30. data/lib/taverna_player/version.rb +1 -1
  31. data/taverna_player.gemspec +1 -0
  32. data/test/dummy/app/views/layouts/application.html.erb +1 -1
  33. data/test/dummy/config/initializers/taverna_player.rb +1 -4
  34. data/test/dummy/config/routes.rb +1 -7
  35. data/test/dummy/db/migrate/20140917165846_drop_workflows.rb +9 -0
  36. data/test/dummy/db/migrate/20140917170017_create_taverna_player_workflows.taverna_player.rb +13 -0
  37. data/test/dummy/db/schema.rb +9 -9
  38. data/test/dummy/lib/callbacks.rb +4 -4
  39. data/test/fixtures/delayed_jobs.yml +45 -0
  40. data/test/fixtures/taverna_player/interactions.yml +3 -3
  41. data/test/fixtures/taverna_player/run_ports.yml +7 -12
  42. data/test/fixtures/taverna_player/runs.yml +43 -13
  43. data/test/fixtures/{workflows.yml → taverna_player/workflows.yml} +1 -4
  44. data/test/fixtures/users.yml +2 -3
  45. data/test/functional/taverna_player/runs_controller_test.rb +42 -15
  46. data/test/functional/taverna_player/workflows_controller_test.rb +37 -0
  47. data/test/unit/helpers/taverna_player/application_helper_test.rb +1 -1
  48. data/test/unit/taverna_player/interaction_test.rb +2 -2
  49. data/test/unit/taverna_player/model_proxy_test.rb +58 -0
  50. data/test/unit/taverna_player/run_test.rb +103 -23
  51. data/test/unit/taverna_player/worker_test.rb +2 -0
  52. metadata +39 -12
  53. data/test/dummy/app/models/workflow.rb +0 -32
@@ -0,0 +1,37 @@
1
+ #------------------------------------------------------------------------------
2
+ # Copyright (c) 2013, 2014 The University of Manchester, UK.
3
+ #
4
+ # BSD Licenced. See LICENCE.rdoc for details.
5
+ #
6
+ # Taverna Player was developed in the BioVeL project, funded by the European
7
+ # Commission 7th Framework Programme (FP7), through grant agreement
8
+ # number 283359.
9
+ #
10
+ # Author: Robert Haines
11
+ #------------------------------------------------------------------------------
12
+
13
+ require 'test_helper'
14
+
15
+ module TavernaPlayer
16
+ class WorkflowsControllerTest < ActionController::TestCase
17
+ setup do
18
+ @routes = TavernaPlayer::Engine.routes
19
+ end
20
+
21
+ test "should route to workflows" do
22
+ assert_routing "/workflows",
23
+ { :controller => "taverna_player/workflows", :action => "index" }, {},
24
+ {}, "Did not route correctly"
25
+ end
26
+
27
+ test "should get index html" do
28
+ get :index
29
+ assert_response :success
30
+ end
31
+
32
+ test "should get index json" do
33
+ get :index, :format => :json
34
+ assert_response :success
35
+ end
36
+ end
37
+ end
@@ -16,7 +16,7 @@ module TavernaPlayer
16
16
  class ApplicationHelperTest < ActionView::TestCase
17
17
  setup do
18
18
  @run = taverna_player_runs(:one)
19
- @workflow = workflows(:one)
19
+ @workflow = taverna_player_workflows(:one)
20
20
  end
21
21
 
22
22
  test "should output embedded run path from id" do
@@ -1,5 +1,5 @@
1
1
  #------------------------------------------------------------------------------
2
- # Copyright (c) 2013 The University of Manchester, UK.
2
+ # Copyright (c) 2013, 2014 The University of Manchester, UK.
3
3
  #
4
4
  # BSD Licenced. See LICENCE.rdoc for details.
5
5
  #
@@ -22,7 +22,7 @@ module TavernaPlayer
22
22
  test "should not allow two identical serial numbers for the same run" do
23
23
  int = Interaction.new
24
24
  int.serial = "ask0"
25
- int.run_id = 4
25
+ int.run = taverna_player_runs(:four)
26
26
  refute int.save, "Saved the interaction with a non-unique serial number"
27
27
  end
28
28
 
@@ -0,0 +1,58 @@
1
+ #------------------------------------------------------------------------------
2
+ # Copyright (c) 2014 The University of Manchester, UK.
3
+ #
4
+ # BSD Licenced. See LICENCE.rdoc for details.
5
+ #
6
+ # Taverna Player was developed in the BioVeL project, funded by the European
7
+ # Commission 7th Framework Programme (FP7), through grant agreement
8
+ # number 283359.
9
+ #
10
+ # Author: Robert Haines
11
+ #------------------------------------------------------------------------------
12
+
13
+ require 'test_helper'
14
+
15
+ class NameTest
16
+ def proxy_method
17
+ 1
18
+ end
19
+ end
20
+
21
+ class ModelProxyTest < ActiveSupport::TestCase
22
+
23
+ setup do
24
+ @name = "NameTest"
25
+ @rooted_name = "::#{@name}"
26
+ @constant = ::NameTest
27
+ @methods = [ :test1, :test2 ]
28
+ end
29
+
30
+ test "name is rooted" do
31
+ mp = TavernaPlayer::ModelProxy.new(@name)
32
+
33
+ assert_equal @rooted_name, mp.class_name
34
+ assert_equal @constant, mp.class_const
35
+ end
36
+
37
+ test "already rooted name" do
38
+ mp = TavernaPlayer::ModelProxy.new(@rooted_name)
39
+
40
+ assert_equal @rooted_name, mp.class_name
41
+ assert_equal @constant, mp.class_const
42
+ end
43
+
44
+ test "proxy methods" do
45
+ mp = TavernaPlayer::ModelProxy.new(@name, @methods)
46
+
47
+ @methods.each do |method|
48
+ setter = "#{method}_method_name=".to_sym
49
+ assert mp.respond_to?(method)
50
+ assert mp.respond_to?(setter)
51
+
52
+ # Set the proxy method, then call it.
53
+ mp.send(setter, :proxy_method)
54
+ assert_equal 1, mp.send(method, NameTest.new)
55
+ end
56
+ end
57
+
58
+ end
@@ -1,5 +1,5 @@
1
1
  #------------------------------------------------------------------------------
2
- # Copyright (c) 2013 The University of Manchester, UK.
2
+ # Copyright (c) 2013, 2014 The University of Manchester, UK.
3
3
  #
4
4
  # BSD Licenced. See LICENCE.rdoc for details.
5
5
  #
@@ -14,9 +14,24 @@ require 'test_helper'
14
14
 
15
15
  module TavernaPlayer
16
16
  class RunTest < ActiveSupport::TestCase
17
+
18
+ setup do
19
+ @run1 = taverna_player_runs(:one)
20
+ @run2 = taverna_player_runs(:two)
21
+ @run3 = taverna_player_runs(:three)
22
+ @run4 = taverna_player_runs(:four)
23
+ @run5 = taverna_player_runs(:five)
24
+ @run6 = taverna_player_runs(:six)
25
+ @run8 = taverna_player_runs(:eight)
26
+ @run9 = taverna_player_runs(:nine)
27
+ @run10 = taverna_player_runs(:ten)
28
+ @run11 = taverna_player_runs(:eleven)
29
+ @workflow = taverna_player_workflows(:one)
30
+ end
31
+
17
32
  test "should not save run with an illegal state" do
18
33
  run = Run.new
19
- run.workflow = workflows(:one)
34
+ run.workflow = @workflow
20
35
  run.state = :not_a_state
21
36
  assert !run.save, "Saved the run with an illegal state"
22
37
  end
@@ -37,7 +52,7 @@ module TavernaPlayer
37
52
 
38
53
  test "should not save run with cancelled state if not marked as stopped" do
39
54
  run = Run.new
40
- run.workflow = workflows(:one)
55
+ run.workflow = @workflow
41
56
  run.saved_state = "cancelled"
42
57
  run.stop = false
43
58
  refute run.save, "Saved run with cancelled state when not stopped first"
@@ -45,7 +60,7 @@ module TavernaPlayer
45
60
 
46
61
  test "should cancel run if run set to stop first" do
47
62
  run = Run.new
48
- run.workflow = workflows(:one)
63
+ run.workflow = @workflow
49
64
  refute run.stop, "Run's stop flag was set upon creation"
50
65
  run.cancel
51
66
  run.state = :cancelled
@@ -56,7 +71,7 @@ module TavernaPlayer
56
71
 
57
72
  test "should not be able to set state to cancelling directly" do
58
73
  run = Run.new
59
- run.workflow = workflows(:one)
74
+ run.workflow = @workflow
60
75
  assert run.save, "Could not save run initially"
61
76
 
62
77
  run.state = :cancelling
@@ -65,7 +80,7 @@ module TavernaPlayer
65
80
 
66
81
  test "should be in cancelling state after being cancelled" do
67
82
  run = Run.new
68
- run.workflow = workflows(:one)
83
+ run.workflow = @workflow
69
84
  run.state = :running
70
85
  assert run.save, "Could not save run initially."
71
86
  run.delayed_job_id = nil # Remove delayed job to pretend it is running.
@@ -96,35 +111,39 @@ module TavernaPlayer
96
111
  end
97
112
 
98
113
  test "complete run states" do
99
- refute taverna_player_runs(:one).complete?, "Run not complete"
100
- refute taverna_player_runs(:two).complete?, "Run not complete"
101
- assert taverna_player_runs(:three).complete?, "Run is complete"
102
- refute taverna_player_runs(:four).complete?, "Run not complete"
103
- refute taverna_player_runs(:five).complete?, "Run not complete"
104
- assert taverna_player_runs(:six).complete?, "Run is complete"
114
+ refute @run1.complete?, "Run not complete"
115
+ refute @run2.complete?, "Run not complete"
116
+ assert @run3.complete?, "Run is complete"
117
+ refute @run4.complete?, "Run not complete"
118
+ refute @run5.complete?, "Run not complete"
119
+ assert @run6.complete?, "Run is complete"
120
+ refute @run8.complete?, "Run not complete"
121
+ assert @run9.complete?, "Run is complete"
122
+ assert @run10.complete?, "Run is complete"
123
+ refute @run11.complete?, "Run not complete"
105
124
  end
106
125
 
107
126
  test "a parent cannot be younger than its child" do
108
- older = Run.create(:workflow_id => 1)
109
- young = Run.create(:workflow_id => 1)
127
+ older = Run.create(:workflow_id => @workflow.id)
128
+ young = Run.create(:workflow_id => @workflow.id)
110
129
  older.parent = young
111
130
  refute older.save, "Run saved with a younger parent"
112
131
  end
113
132
 
114
133
  test "parent/child graph should be acyclic" do
115
- parent = Run.create(:workflow_id => 1)
116
- child = Run.create(:workflow_id => 1)
134
+ parent = Run.create(:workflow_id => @workflow.id)
135
+ child = Run.create(:workflow_id => @workflow.id)
117
136
  parent.children << child
118
137
  parent.parent = child
119
138
  refute parent.save, "Run saved with child as its parent"
120
139
  end
121
140
 
122
141
  test "finding root ancestor of a run" do
123
- one = Run.create(:workflow_id => 1)
142
+ one = Run.create(:workflow_id => @workflow.id)
124
143
  assert_same one, one.root_ancestor, "Single run is not its own root"
125
144
  assert_equal 0, one.children.count, "Not a parent, should not have children"
126
145
 
127
- two = Run.create(:workflow_id => 1)
146
+ two = Run.create(:workflow_id => @workflow.id)
128
147
  assert_same two, two.root_ancestor, "Single run is not its own root"
129
148
 
130
149
  two.parent = one
@@ -133,7 +152,7 @@ module TavernaPlayer
133
152
  assert_same one, two.root_ancestor, "Child run does not have parent as its root"
134
153
  assert_equal 1, one.children.count, "Parent should have one child"
135
154
 
136
- three = Run.create(:workflow_id => 1)
155
+ three = Run.create(:workflow_id => @workflow.id)
137
156
  assert_same three, three.root_ancestor, "Single run is not its own root"
138
157
 
139
158
  three.parent = two
@@ -144,7 +163,7 @@ module TavernaPlayer
144
163
  assert_equal 1, two.children.count, "Parent should have one child"
145
164
  assert_equal 1, one.children.count, "Grandparent should have one child"
146
165
 
147
- four = Run.create(:workflow_id => 1)
166
+ four = Run.create(:workflow_id => @workflow.id)
148
167
  assert_same four, four.root_ancestor, "Single run is not its own root"
149
168
 
150
169
  four.parent = one
@@ -155,7 +174,7 @@ module TavernaPlayer
155
174
 
156
175
  test "create run from another run" do
157
176
  assert_difference(["Run.count", "RunPort::Input.count"]) do
158
- parent = taverna_player_runs(:three)
177
+ parent = @run3
159
178
  run = Run.create(:parent_id => parent.id)
160
179
  assert run.valid?, "Run is invalid"
161
180
  refute run.new_record?, "Run was not saved"
@@ -167,7 +186,7 @@ module TavernaPlayer
167
186
 
168
187
  test "new run from another run" do
169
188
  assert_difference(["Run.count", "RunPort::Input.count"]) do
170
- parent = taverna_player_runs(:three)
189
+ parent = @run3
171
190
  run = Run.new(:parent_id => parent.id)
172
191
  assert run.save, "Run was not saved"
173
192
  assert run.has_parent?, "Run should have a parent"
@@ -177,7 +196,7 @@ module TavernaPlayer
177
196
  end
178
197
 
179
198
  test "killing parent should orphan child" do
180
- parent = taverna_player_runs(:three)
199
+ parent = @run3
181
200
  run = Run.create(:parent_id => parent.id)
182
201
  assert run.valid?, "Child run is invalid"
183
202
  assert_not_nil run.parent_id, "Child run has no parent"
@@ -192,5 +211,66 @@ module TavernaPlayer
192
211
  run.reload
193
212
  assert_nil run.parent_id, "Child run still has a parent"
194
213
  end
214
+
215
+ test "delayed job state affects run state" do
216
+ assert @run8.initialized?, "Run should be initialized"
217
+ assert @run9.pending?, "Run should be pending"
218
+
219
+ assert @run10.running?, "Run should be running"
220
+ assert @run11.running?, "Run should be running"
221
+
222
+ refute @run8.job_failed?, "Job has not failed"
223
+ assert @run9.job_failed?, "Job has failed"
224
+ assert @run10.job_failed?, "Job has failed"
225
+ refute @run11.job_failed?, "Job has not failed"
226
+ end
227
+
228
+ test "can delete running run with failed delayed job" do
229
+ assert_difference(["Run.count", "Delayed::Job.count"], -1) do
230
+ @run9.destroy
231
+ end
232
+ end
233
+
234
+ test "cannot delete running run with running delayed job" do
235
+ assert_no_difference(["Run.count", "Delayed::Job.count"]) do
236
+ @run8.destroy
237
+ end
238
+ end
239
+
240
+ test "cancelling run where delayed job not locked" do
241
+ assert_no_difference("Run.count") do
242
+ assert_difference("Delayed::Job.count", -1) do
243
+ @run8.cancel
244
+ end
245
+ end
246
+
247
+ assert @run8.cancelled?, "Run should be cancelled"
248
+ end
249
+
250
+ test "cancelling run where delayed job has failed" do
251
+ assert_no_difference("Run.count") do
252
+ assert_difference("Delayed::Job.count", -1) do
253
+ @run9.cancel
254
+ end
255
+ end
256
+
257
+ assert @run9.cancelled?, "Run should be cancelled"
258
+
259
+ assert_no_difference("Run.count") do
260
+ assert_difference("Delayed::Job.count", -1) do
261
+ @run10.cancel
262
+ end
263
+ end
264
+
265
+ assert @run10.cancelled?, "Run should be cancelled"
266
+ end
267
+
268
+ test "do not destroy running delayed job upon cancel" do
269
+ assert_no_difference(["Run.count", "Delayed::Job.count"]) do
270
+ @run11.cancel
271
+ end
272
+
273
+ assert @run11.cancelling?, "Run should be cancelling"
274
+ end
195
275
  end
196
276
  end
@@ -32,6 +32,8 @@ class WorkerTest < ActiveSupport::TestCase
32
32
  config.post_run_callback = @noop_callback
33
33
  config.run_cancelled_callback = @noop_callback
34
34
  config.run_failed_callback = @noop_callback
35
+ config.current_user_callback =
36
+ Proc.new { User.find(ActiveRecord::Fixtures.identify(:test_user)) }
35
37
  end
36
38
 
37
39
  # Stuff we can't test yet in TavernaPlayer::Worker.
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: taverna-player
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.8.0
4
+ version: 0.9.0
5
5
  platform: ruby
6
6
  authors:
7
7
  - Robert Haines
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2014-06-25 00:00:00.000000000 Z
11
+ date: 2014-09-19 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: rails
@@ -52,6 +52,20 @@ dependencies:
52
52
  - - ~>
53
53
  - !ruby/object:Gem::Version
54
54
  version: '4.1'
55
+ - !ruby/object:Gem::Dependency
56
+ name: taverna-t2flow
57
+ requirement: !ruby/object:Gem::Requirement
58
+ requirements:
59
+ - - ~>
60
+ - !ruby/object:Gem::Version
61
+ version: 0.5.1
62
+ type: :runtime
63
+ prerelease: false
64
+ version_requirements: !ruby/object:Gem::Requirement
65
+ requirements:
66
+ - - ~>
67
+ - !ruby/object:Gem::Version
68
+ version: 0.5.1
55
69
  - !ruby/object:Gem::Dependency
56
70
  name: t2-server
57
71
  requirement: !ruby/object:Gem::Requirement
@@ -237,6 +251,7 @@ files:
237
251
  - .ruby-version
238
252
  - .travis.yml
239
253
  - CHANGES.rdoc
254
+ - CITATION
240
255
  - Gemfile
241
256
  - LICENCE.rdoc
242
257
  - README.rdoc
@@ -250,12 +265,14 @@ files:
250
265
  - app/controllers/taverna_player/job_queue_controller.rb
251
266
  - app/controllers/taverna_player/runs_controller.rb
252
267
  - app/controllers/taverna_player/service_credentials_controller.rb
268
+ - app/controllers/taverna_player/workflows_controller.rb
253
269
  - app/helpers/taverna_player/application_helper.rb
254
270
  - app/helpers/taverna_player/runs_helper.rb
255
271
  - app/models/taverna_player/interaction.rb
256
272
  - app/models/taverna_player/run.rb
257
273
  - app/models/taverna_player/run_port.rb
258
274
  - app/models/taverna_player/service_credential.rb
275
+ - app/models/taverna_player/workflow.rb
259
276
  - app/views/layouts/taverna_player/embedded.html.erb
260
277
  - app/views/taverna_player/job_queue/index.html.erb
261
278
  - app/views/taverna_player/runs/_button.html.erb
@@ -286,6 +303,9 @@ files:
286
303
  - app/views/taverna_player/service_credentials/index.html.erb
287
304
  - app/views/taverna_player/service_credentials/new.html.erb
288
305
  - app/views/taverna_player/service_credentials/show.html.erb
306
+ - app/views/taverna_player/workflows/_info.json.jbuilder
307
+ - app/views/taverna_player/workflows/index.html.erb
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+ - app/views/taverna_player/workflows/index.json.jbuilder
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  - config/locales/en.yml
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  - config/routes.rb
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  - db/migrate/20130313105546_create_taverna_player_runs.rb
@@ -318,6 +338,7 @@ files:
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  - db/migrate/20131127163438_remove_run_id_index_from_taverna_player_runs.rb
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  - db/migrate/20140226135723_change_taverna_player_runs_status_message_to_use_keys.rb
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+ - db/migrate/20140917165505_create_taverna_player_workflows.rb
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  - lib/generators/taverna_player/callbacks_generator.rb
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  - lib/generators/taverna_player/controllers_generator.rb
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  - lib/generators/taverna_player/install_generator.rb
@@ -331,8 +352,10 @@ files:
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  - lib/generators/templates/controllers/job_queue_controller.rb
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  - lib/generators/templates/controllers/runs_controller.rb
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  - lib/generators/templates/controllers/service_credentials_controller.rb
355
+ - lib/generators/templates/controllers/workflows_controller.rb
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  - lib/generators/templates/models/run.rb
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  - lib/generators/templates/models/run_port.rb
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+ - lib/generators/templates/models/workflow.rb
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  - lib/generators/templates/player_initializer.rb
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  - lib/generators/templates/server_initializer.rb
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  - lib/tasks/delete-cancelled-runs.rake
@@ -342,10 +365,12 @@ files:
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  - lib/taverna_player/concerns/controllers/job_queue_controller.rb
343
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  - lib/taverna_player/concerns/controllers/runs_controller.rb
344
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  - lib/taverna_player/concerns/controllers/service_credentials_controller.rb
368
+ - lib/taverna_player/concerns/controllers/workflows_controller.rb
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  - lib/taverna_player/concerns/models/input_port.rb
346
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  - lib/taverna_player/concerns/models/output_port.rb
347
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  - lib/taverna_player/concerns/models/run.rb
348
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  - lib/taverna_player/concerns/models/run_port.rb
373
+ - lib/taverna_player/concerns/models/workflow.rb
349
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  - lib/taverna_player/concerns/utils.rb
350
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  - lib/taverna_player/concerns/zip.rb
351
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  - lib/taverna_player/engine.rb
@@ -365,12 +390,9 @@ files:
365
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  - test/dummy/app/controllers/home_controller.rb
366
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  - test/dummy/app/controllers/taverna_player/runs_controller.rb
367
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  - test/dummy/app/controllers/taverna_player/service_credentials_controller.rb
368
- - test/dummy/app/controllers/workflows_controller.rb
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  - test/dummy/app/models/user.rb
370
- - test/dummy/app/models/workflow.rb
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  - test/dummy/app/views/home/index.html.erb
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  - test/dummy/app/views/layouts/application.html.erb
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- - test/dummy/app/views/workflows/index.html.erb
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  - test/dummy/config.ru
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  - test/dummy/config/application.rb
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  - test/dummy/config/boot.rb
@@ -422,6 +444,8 @@ files:
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  - test/dummy/db/migrate/20131127163539_remove_run_id_index_from_taverna_player_runs.taverna_player.rb
423
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  - test/dummy/db/migrate/20131127172420_remove_unused_paperclip_columns.taverna_player.rb
424
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  - test/dummy/db/migrate/20140226143013_change_taverna_player_runs_status_message_to_use_keys.taverna_player.rb
447
+ - test/dummy/db/migrate/20140917165846_drop_workflows.rb
448
+ - test/dummy/db/migrate/20140917170017_create_taverna_player_workflows.taverna_player.rb
425
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  - test/dummy/db/schema.rb
426
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  - test/dummy/lib/callbacks.rb
427
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  - test/dummy/log/.gitkeep
@@ -432,24 +456,26 @@ files:
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  - test/dummy/script/delayed_job
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  - test/dummy/script/rails
434
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  - test/dummy/test/functional/home_controller_test.rb
435
- - test/dummy/test/functional/workflows_controller_test.rb
436
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  - test/dummy/tmp/.gitkeep
460
+ - test/fixtures/delayed_jobs.yml
437
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  - test/fixtures/files/non-ascii.csv
438
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  - test/fixtures/files/plain-text.bad-extension
439
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  - test/fixtures/taverna_player/interactions.yml
440
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  - test/fixtures/taverna_player/run_ports.yml
441
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  - test/fixtures/taverna_player/runs.yml
442
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  - test/fixtures/taverna_player/service_credentials.yml
467
+ - test/fixtures/taverna_player/workflows.yml
443
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  - test/fixtures/users.yml
444
- - test/fixtures/workflows.yml
445
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  - test/functional/taverna_player/job_queue_controller_test.rb
446
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  - test/functional/taverna_player/runs_controller_test.rb
447
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  - test/functional/taverna_player/service_credentials_controller_test.rb
472
+ - test/functional/taverna_player/workflows_controller_test.rb
448
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  - test/taverna_player_test.rb
449
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  - test/test_helper.rb
450
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  - test/unit/helpers/taverna_player/application_helper_test.rb
451
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  - test/unit/helpers/taverna_player/runs_helper_test.rb
452
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  - test/unit/taverna_player/interaction_test.rb
478
+ - test/unit/taverna_player/model_proxy_test.rb
453
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  - test/unit/taverna_player/run_port_test.rb
454
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  - test/unit/taverna_player/run_test.rb
455
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  - test/unit/taverna_player/service_credential_test.rb
@@ -490,12 +516,9 @@ test_files:
490
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  - test/dummy/app/controllers/home_controller.rb
491
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  - test/dummy/app/controllers/taverna_player/runs_controller.rb
492
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  - test/dummy/app/controllers/taverna_player/service_credentials_controller.rb
493
- - test/dummy/app/controllers/workflows_controller.rb
494
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  - test/dummy/app/models/user.rb
495
- - test/dummy/app/models/workflow.rb
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  - test/dummy/app/views/home/index.html.erb
497
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  - test/dummy/app/views/layouts/application.html.erb
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- - test/dummy/app/views/workflows/index.html.erb
499
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  - test/dummy/config.ru
500
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  - test/dummy/config/application.rb
501
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  - test/dummy/config/boot.rb
@@ -547,6 +570,8 @@ test_files:
547
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  - test/dummy/db/migrate/20131127163539_remove_run_id_index_from_taverna_player_runs.taverna_player.rb
548
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  - test/dummy/db/migrate/20131127172420_remove_unused_paperclip_columns.taverna_player.rb
549
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  - test/dummy/db/migrate/20140226143013_change_taverna_player_runs_status_message_to_use_keys.taverna_player.rb
573
+ - test/dummy/db/migrate/20140917165846_drop_workflows.rb
574
+ - test/dummy/db/migrate/20140917170017_create_taverna_player_workflows.taverna_player.rb
550
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  - test/dummy/db/schema.rb
551
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  - test/dummy/lib/callbacks.rb
552
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  - test/dummy/log/.gitkeep
@@ -557,24 +582,26 @@ test_files:
557
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  - test/dummy/script/delayed_job
558
583
  - test/dummy/script/rails
559
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  - test/dummy/test/functional/home_controller_test.rb
560
- - test/dummy/test/functional/workflows_controller_test.rb
561
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  - test/dummy/tmp/.gitkeep
586
+ - test/fixtures/delayed_jobs.yml
562
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  - test/fixtures/files/non-ascii.csv
563
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  - test/fixtures/files/plain-text.bad-extension
564
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  - test/fixtures/taverna_player/interactions.yml
565
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  - test/fixtures/taverna_player/run_ports.yml
566
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  - test/fixtures/taverna_player/runs.yml
567
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  - test/fixtures/taverna_player/service_credentials.yml
593
+ - test/fixtures/taverna_player/workflows.yml
568
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  - test/fixtures/users.yml
569
- - test/fixtures/workflows.yml
570
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  - test/functional/taverna_player/job_queue_controller_test.rb
571
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  - test/functional/taverna_player/runs_controller_test.rb
572
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  - test/functional/taverna_player/service_credentials_controller_test.rb
598
+ - test/functional/taverna_player/workflows_controller_test.rb
573
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  - test/taverna_player_test.rb
574
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  - test/test_helper.rb
575
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  - test/unit/helpers/taverna_player/application_helper_test.rb
576
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  - test/unit/helpers/taverna_player/runs_helper_test.rb
577
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  - test/unit/taverna_player/interaction_test.rb
604
+ - test/unit/taverna_player/model_proxy_test.rb
578
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  - test/unit/taverna_player/run_port_test.rb
579
606
  - test/unit/taverna_player/run_test.rb
580
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  - test/unit/taverna_player/service_credential_test.rb