tasci_merger 0.2.2 → 0.3.1

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 00fc6d54856de52b4177c2e01db4583748854a53
-  data.tar.gz: 4097c9807bef4d820121ddb49a5cc33e672ba4fe
+  metadata.gz: 954e2e96e4c21b8fb1f6e5b5c7ba7f5c3dac9dd5
+  data.tar.gz: 52f83f1f802fe89c54a3f524675b04cbbdcc3488
 SHA512:
-  metadata.gz: 0bbe88091909e0b08395e202f120cf9104e8eda3ca94da48343a46e1e0f8ab253c10d6d7bc6e6ced2b58fcee145c838a6db197535b3f66fde39d957e05dfff53
-  data.tar.gz: dd4753c3782d6e844d4836650e27c798340f1ad8616e47a88253809a3540f0a5e7537297d1e81fb6ed75c3d066c7e85d27c9aaf5d2548dd9fda7165b5e7a2cbf
+  metadata.gz: 10c2a5b74a095d0765cec187932112c089318eedbd0f4b918bac89b9401f13cb220cd83d0afee11c17d268efdc31341ae61ea3eda114f30f8f2a6ee3d9c485f6
+  data.tar.gz: 8d314b9b0a46f8e449170c972945b00d5195cc1459e6ebe8e1f2d7f292dd00012737f870abc88cfa6c405ed236280daf80a90df2fa13a07bd7e890b216e514df

data/lib/tasci_merger.rb

@@ -137,6 +137,9 @@ class TasciMerger
     sem_merged_file = CSV.open(File.join(@output_directory, "#{@subject_code}_merged_sem_#{Time.zone.now.strftime("%Y%m%d")}.csv"), "wb")
     simple_merged_file << %w(SUBJECT_CODE LABTIME)
 
+    simple_sem_file = CSV.open(File.join(@output_directory, "#{@subject_code}_merged_simple_sem_#{Time.zone.now.strftime("%Y%m%d")}.csv"), "wb")
+    simple_sem_file << %w(SLEEP_STAGE LABTIME SEM_FLAG)
+
     previous_first_labtime = nil
     previous_last_labtime = nil
 
@@ -310,11 +313,13 @@ class TasciMerger
         output_line = [@subject_code.upcase, file_info[:sleep_wake_episode], line_labtime.to_decimal, line_event, sleep_period, sem_event]
         simple_output_line = [simple_line_event, line_labtime.to_decimal]
         sem_output_line = [@subject_code.upcase, line_labtime.to_decimal] if sem_event == 1
+        # 4th flie added        
+        simple_sem = [simple_line_event, line_labtime.to_decimal, sem_event ]        
 
         merged_file << output_line
         simple_merged_file << simple_output_line
         sem_merged_file << sem_output_line if sem_event == 1
-
+        simple_sem_file << simple_sem
         #MY_LOG.info fields
       end
 
@@ -330,6 +335,7 @@ class TasciMerger
     merged_file.close
     simple_merged_file.close
     sem_merged_file.close
+    simple_sem_file.close
   end
 
 end

data/tasci_merger.gemspec

@@ -1,11 +1,11 @@
 Gem::Specification.new do |s|
   s.name        = 'tasci_merger'
-  s.version     = '0.2.2'
-  s.date        = '2017-03-26'
+  s.version     = '0.3.1'
+  s.date        = '2018-03-19'
   s.summary     = "Merger utility for TASCI scored sleep files."
   s.description = "Merger utility for TASCI scored sleep files, built for the Division of Sleep and Circadian Disorders at BWH."
-  s.authors     = ["Piotr Mankowski"]
-  s.email       = 'pmankowski@partners.org'
+  s.authors     = ["Piotr Mankowski", "Chenxi Gao"]
+  s.email       = ['pmankowski@partners.org', 'cg342@bwh.harvard.edu']
   s.files       = %w(LICENSE README.md tasci_merger.gemspec lib/tasci_merger.rb lib/man_merger.rb lib/labtime.rb)
   s.require_path = 'lib'
   s.homepage    =

metadata

@@ -1,14 +1,15 @@
 --- !ruby/object:Gem::Specification
 name: tasci_merger
 version: !ruby/object:Gem::Version
-  version: 0.2.2
+  version: 0.3.1
 platform: ruby
 authors:
 - Piotr Mankowski
+- Chenxi Gao
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2017-03-26 00:00:00.000000000 Z
+date: 2018-03-19 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: activesupport
@@ -46,7 +47,9 @@ dependencies:
         version: '1'
 description: Merger utility for TASCI scored sleep files, built for the Division of
   Sleep and Circadian Disorders at BWH.
-email: pmankowski@partners.org
+email:
+- pmankowski@partners.org
+- cg342@bwh.harvard.edu
 executables:
 - merge_tasci
 extensions: []