tasci_merger 0.2.1 → 0.2.2

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data/LICENSE CHANGED
@@ -1,22 +1,22 @@
1
- The MIT License (MIT)
2
-
3
- Copyright (c) 2015 Piotr Mankowski
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-
5
- Permission is hereby granted, free of charge, to any person obtaining a copy
6
- of this software and associated documentation files (the "Software"), to deal
7
- in the Software without restriction, including without limitation the rights
8
- to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
- copies of the Software, and to permit persons to whom the Software is
10
- furnished to do so, subject to the following conditions:
11
-
12
- The above copyright notice and this permission notice shall be included in all
13
- copies or substantial portions of the Software.
14
-
15
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
- IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
- FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
- AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
- LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
- OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
- SOFTWARE.
22
-
1
+ The MIT License (MIT)
2
+
3
+ Copyright (c) 2015 Piotr Mankowski
4
+
5
+ Permission is hereby granted, free of charge, to any person obtaining a copy
6
+ of this software and associated documentation files (the "Software"), to deal
7
+ in the Software without restriction, including without limitation the rights
8
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
+ copies of the Software, and to permit persons to whom the Software is
10
+ furnished to do so, subject to the following conditions:
11
+
12
+ The above copyright notice and this permission notice shall be included in all
13
+ copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
+ SOFTWARE.
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+
data/README.md CHANGED
@@ -1,77 +1,77 @@
1
- # Instructions for Tasci File Merger
2
-
3
- ## Installation
4
- 1. Install Ruby.
5
- - [http://rubyinstaller.org/](http://rubyinstaller.org/)
6
- - Download Ruby 2.1.5 (x64) installer.
7
- - Install to desired *RUBY_DIRECTORY*
8
- - Choose option to add ruby to *PATH*
9
- - Choose option to associate *.rb files with Ruby
10
-
11
- 2. Verify ruby installation.
12
- - Go into command line.
13
- - Enter `ruby -v`
14
- - Ouput should look like `ruby 2.1.5p273...`
15
- - Enter `gem -v`
16
- - Output should look like `2.2.2`
17
-
18
- 3. Fix potential RubyGems certificate bug, as documented on [this page](https://gist.github.com/luislavena/f064211759ee0f806c88)
19
- - Try running `gem install activesupport --no-ri --no-rdoc`
20
- - Click `Allow access` if prompted by Windows Firewall message, choosing option for *Private networks*
21
- - If installation fails with an `SSL_error`, follow the following steps:
22
- - Save certificate file from [this website](https://raw.githubusercontent.com/rubygems/rubygems/master/lib/rubygems/ssl_certs/AddTrustExternalCARoot-2048.pem) to the Downloads directory.
23
- - **Make sure file is saved with the *.pem extension**
24
- - Find rubygems folder location by typing `gem which rubygems` into the console. You should get output like `C:/Ruby21/lib/ruby/2.1.0/rubygems.rb`
25
- - Locate the directory and open it in an explorer window. For the above path, the directory would be `C:\Ruby21\lib\ruby\2.1.0\rubygems`
26
- - Open the `ssl_certs` directory, and copy the previously-downloaded `*.pem` file into this directory.
27
- - Close and re-open a console window.
28
-
29
- 4. Install required gem.
30
- - Run:
31
-
32
- ```
33
- gem install tasci_merger
34
- ```
35
-
36
- ## Usage in IRB
37
-
38
- 1. Open console and run `irb` to open interactive ruby console.
39
-
40
- 2. Run `require 'tasci_merger'`
41
-
42
- 3. Create tasci merger object:
43
-
44
- ```ruby
45
- tm = TasciMerger.new("SUBJECT_CODE", "TASCI_DIRECTORY", "OUTPUT_DIRECTORY")
46
- ```
47
-
48
- 4. Create master file:
49
-
50
- ```ruby
51
- tm.create_master_list
52
- ```
53
-
54
- 5. Create 2 merged files:
55
-
56
- ```ruby
57
- tm.merge_files
58
- ```
59
-
60
- ## Command-line Usage
61
-
62
- The ruby gem makes the `tasci_merger` command available.
63
-
64
- The command takes the following parameters:
65
- - SUBJECT_CODE
66
- - TASCI_DIRECTORY
67
- - OUTPUT_DIRECTORY
68
-
69
- The command creates a master file and two merged files in the output directory.
70
-
71
- **Example Usage:**
72
-
73
- ```
74
- merge_tasci 3441GX X:/TasciFilesFor3441GX C:/Circadian
75
- ```
76
-
77
- This command would create the 2 files in the `C:/Circadian` directory.
1
+ # Instructions for Tasci File Merger
2
+
3
+ ## Installation
4
+ 1. Install Ruby.
5
+ - [http://rubyinstaller.org/](http://rubyinstaller.org/)
6
+ - Download Ruby 2.1.5 (x64) installer.
7
+ - Install to desired *RUBY_DIRECTORY*
8
+ - Choose option to add ruby to *PATH*
9
+ - Choose option to associate *.rb files with Ruby
10
+
11
+ 2. Verify ruby installation.
12
+ - Go into command line.
13
+ - Enter `ruby -v`
14
+ - Ouput should look like `ruby 2.1.5p273...`
15
+ - Enter `gem -v`
16
+ - Output should look like `2.2.2`
17
+
18
+ 3. Fix potential RubyGems certificate bug, as documented on [this page](https://gist.github.com/luislavena/f064211759ee0f806c88)
19
+ - Try running `gem install activesupport --no-ri --no-rdoc`
20
+ - Click `Allow access` if prompted by Windows Firewall message, choosing option for *Private networks*
21
+ - If installation fails with an `SSL_error`, follow the following steps:
22
+ - Save certificate file from [this website](https://raw.githubusercontent.com/rubygems/rubygems/master/lib/rubygems/ssl_certs/AddTrustExternalCARoot-2048.pem) to the Downloads directory.
23
+ - **Make sure file is saved with the *.pem extension**
24
+ - Find rubygems folder location by typing `gem which rubygems` into the console. You should get output like `C:/Ruby21/lib/ruby/2.1.0/rubygems.rb`
25
+ - Locate the directory and open it in an explorer window. For the above path, the directory would be `C:\Ruby21\lib\ruby\2.1.0\rubygems`
26
+ - Open the `ssl_certs` directory, and copy the previously-downloaded `*.pem` file into this directory.
27
+ - Close and re-open a console window.
28
+
29
+ 4. Install required gem.
30
+ - Run:
31
+
32
+ ```
33
+ gem install tasci_merger
34
+ ```
35
+
36
+ ## Usage in IRB
37
+
38
+ 1. Open console and run `irb` to open interactive ruby console.
39
+
40
+ 2. Run `require 'tasci_merger'`
41
+
42
+ 3. Create tasci merger object:
43
+
44
+ ```ruby
45
+ tm = TasciMerger.new("SUBJECT_CODE", "TASCI_DIRECTORY", "OUTPUT_DIRECTORY")
46
+ ```
47
+
48
+ 4. Create master file:
49
+
50
+ ```ruby
51
+ tm.create_master_list
52
+ ```
53
+
54
+ 5. Create 2 merged files:
55
+
56
+ ```ruby
57
+ tm.merge_files
58
+ ```
59
+
60
+ ## Command-line Usage
61
+
62
+ The ruby gem makes the `tasci_merger` command available.
63
+
64
+ The command takes the following parameters:
65
+ - SUBJECT_CODE
66
+ - TASCI_DIRECTORY
67
+ - OUTPUT_DIRECTORY
68
+
69
+ The command creates a master file and two merged files in the output directory.
70
+
71
+ **Example Usage:**
72
+
73
+ ```
74
+ merge_tasci 3441GX X:/TasciFilesFor3441GX C:/Circadian
75
+ ```
76
+
77
+ This command would create the 2 files in the `C:/Circadian` directory.
data/bin/merge_tasci CHANGED
@@ -1,10 +1,9 @@
1
- #!/usr/bin/env ruby
2
-
3
- require 'tasci_merger'
4
-
5
- # SUBJECT_CODE, TASCI_DIR
6
- tm = TasciMerger.new(ARGV[0], ARGV[1], ARGV[2])
7
- tm.create_master_list
8
- tm.merge_files
9
-
1
+ #!/usr/bin/env ruby
2
+ require 'tasci_merger'
3
+
4
+ # SUBJECT_CODE, TASCI_DIR
5
+ tm = TasciMerger.new(ARGV[0], ARGV[1], ARGV[2])
6
+ tm.create_master_list
7
+ tm.merge_files
8
+
10
9
  m = TasciMerger.new("3232GX", "/T/IPM/CSR_32d_FD_20h/3232GX/PSG/Scored/TASCI", "/home/pwm4/Desktop/")
data/lib/labtime.rb CHANGED
@@ -1,111 +1,111 @@
1
- require('active_support/values/time_zone')
2
- require('active_support/time_with_zone')
3
- require 'active_support/core_ext/time/zones'
4
- require 'active_support/core_ext/time'
5
- require 'active_support/core_ext/numeric/time'
6
-
7
- class Labtime
8
- include Comparable
9
-
10
- attr_accessor :year, :hour, :min, :sec, :time_zone
11
- DEFAULT_TIME_ZONE = ActiveSupport::TimeZone.new("Eastern Time (US & Canada)")
12
-
13
- def self.parse(realtime)
14
- # Return nil if nil parameter
15
- return nil if realtime.nil?
16
-
17
- # Make sure datetime is an ActiveSupport:TimeWithZone object
18
- raise ArgumentError, "realtime class #{realtime.class} is not ActiveSupport::TimeWithZone" unless realtime.is_a?(ActiveSupport::TimeWithZone)
19
-
20
- # year is easy
21
- year = realtime.year
22
-
23
- # Reference fo labtime is start of year
24
- Time.zone = realtime.time_zone
25
- reference_time = Time.zone.local(year)
26
-
27
- # find difference between reference and
28
- second_difference = realtime.to_i - reference_time.to_i
29
-
30
- # convert second difference to labtime
31
- hour = second_difference / 3600
32
- min = (second_difference - (hour * 3600)) / 60
33
- sec = (second_difference - (hour * 3600) - (min * 60))
34
-
35
- self.new(year, hour, min, sec, realtime.time_zone)
36
- end
37
-
38
- def self.from_decimal(decimal_labtime, year, time_zone = ActiveSupport::TimeZone.new("Eastern Time (US & Canada)"))
39
- raise ArguementError, "No year supplied!" if year.blank?
40
-
41
- hour = decimal_labtime.to_i
42
- remainder = decimal_labtime - hour.to_f
43
- min_labtime = 60.0 * remainder
44
- min = min_labtime.to_i
45
- remainder = min_labtime - min.to_f
46
- sec = (60 * remainder).round.to_i
47
-
48
- self.new(year, hour, min, sec, time_zone)
49
- end
50
-
51
- def self.from_seconds(sec_time, year, time_zone = DEFAULT_TIME_ZONE)
52
- hour = (sec_time / 3600.0).to_i
53
- sec_time = sec_time - (hour * 3600)
54
- min = (sec_time / 60.0).to_i
55
- sec_time = sec_time - (min * 60)
56
- sec = sec_time
57
-
58
- self.new(year, hour, min, sec, time_zone)
59
- end
60
-
61
- def self.from_s(str, time_params = {}, time_zone = DEFAULT_TIME_ZONE)
62
- time_captures = /(\d+)\:(\d{1,2})(\:(\d{1,2}))?(\s(\d\d\d\d))?\z/.match(str).captures
63
-
64
- time_params[:hour] ||= time_captures[0]
65
- time_params[:min] ||= time_captures[1]
66
- time_params[:sec] ||= time_captures[3]
67
- time_params[:year] ||= time_captures[5]
68
-
69
- self.new(time_params[:year], time_params[:hour], time_params[:min], time_params[:sec], time_zone)
70
- end
71
-
72
- def initialize(year, hour, min, sec, time_zone = nil)
73
- @year = year.to_i
74
- @hour = hour.to_i
75
- @min = min.to_i
76
- @sec = sec.to_i
77
- @time_zone = time_zone || DEFAULT_TIME_ZONE
78
- end
79
-
80
- def to_time
81
- reference_time = time_zone.local(year)
82
- reference_time + time_in_seconds
83
- end
84
-
85
- def <=>(other)
86
- to_time <=> other.to_time
87
- end
88
-
89
- def to_s
90
- "#{year} #{hour}:#{min}:#{sec} #{time_zone.to_s}"
91
- end
92
-
93
- def to_short_s
94
- "#{hour}:#{min}:#{sec}"
95
- end
96
-
97
- def time_in_seconds
98
- hour * 3600 + min * 60 + sec
99
- end
100
-
101
- def add_seconds(sec)
102
- self.class.from_seconds(self.time_in_seconds + sec, self.year, self.time_zone)
103
- end
104
-
105
- def to_decimal
106
- hour.to_f + (min.to_f/60.0) + (sec.to_f/3600.0)
107
- end
108
-
109
- private
110
-
1
+ require('active_support/values/time_zone')
2
+ require('active_support/time_with_zone')
3
+ require 'active_support/core_ext/time/zones'
4
+ require 'active_support/core_ext/time'
5
+ require 'active_support/core_ext/numeric/time'
6
+
7
+ class Labtime
8
+ include Comparable
9
+
10
+ attr_accessor :year, :hour, :min, :sec, :time_zone
11
+ DEFAULT_TIME_ZONE = ActiveSupport::TimeZone.new("Eastern Time (US & Canada)")
12
+
13
+ def self.parse(realtime)
14
+ # Return nil if nil parameter
15
+ return nil if realtime.nil?
16
+
17
+ # Make sure datetime is an ActiveSupport:TimeWithZone object
18
+ raise ArgumentError, "realtime class #{realtime.class} is not ActiveSupport::TimeWithZone" unless realtime.is_a?(ActiveSupport::TimeWithZone)
19
+
20
+ # year is easy
21
+ year = realtime.year
22
+
23
+ # Reference fo labtime is start of year
24
+ Time.zone = realtime.time_zone
25
+ reference_time = Time.zone.local(year)
26
+
27
+ # find difference between reference and
28
+ second_difference = realtime.to_i - reference_time.to_i
29
+
30
+ # convert second difference to labtime
31
+ hour = second_difference / 3600
32
+ min = (second_difference - (hour * 3600)) / 60
33
+ sec = (second_difference - (hour * 3600) - (min * 60))
34
+
35
+ self.new(year, hour, min, sec, realtime.time_zone)
36
+ end
37
+
38
+ def self.from_decimal(decimal_labtime, year, time_zone = ActiveSupport::TimeZone.new("Eastern Time (US & Canada)"))
39
+ raise ArguementError, "No year supplied!" if year.blank?
40
+
41
+ hour = decimal_labtime.to_i
42
+ remainder = decimal_labtime - hour.to_f
43
+ min_labtime = 60.0 * remainder
44
+ min = min_labtime.to_i
45
+ remainder = min_labtime - min.to_f
46
+ sec = (60 * remainder).round.to_i
47
+
48
+ self.new(year, hour, min, sec, time_zone)
49
+ end
50
+
51
+ def self.from_seconds(sec_time, year, time_zone = DEFAULT_TIME_ZONE)
52
+ hour = (sec_time / 3600.0).to_i
53
+ sec_time = sec_time - (hour * 3600)
54
+ min = (sec_time / 60.0).to_i
55
+ sec_time = sec_time - (min * 60)
56
+ sec = sec_time
57
+
58
+ self.new(year, hour, min, sec, time_zone)
59
+ end
60
+
61
+ def self.from_s(str, time_params = {}, time_zone = DEFAULT_TIME_ZONE)
62
+ time_captures = /(\d+)\:(\d{1,2})(\:(\d{1,2}))?(\s(\d\d\d\d))?\z/.match(str).captures
63
+
64
+ time_params[:hour] ||= time_captures[0]
65
+ time_params[:min] ||= time_captures[1]
66
+ time_params[:sec] ||= time_captures[3]
67
+ time_params[:year] ||= time_captures[5]
68
+
69
+ self.new(time_params[:year], time_params[:hour], time_params[:min], time_params[:sec], time_zone)
70
+ end
71
+
72
+ def initialize(year, hour, min, sec, time_zone = nil)
73
+ @year = year.to_i
74
+ @hour = hour.to_i
75
+ @min = min.to_i
76
+ @sec = sec.to_i
77
+ @time_zone = time_zone || DEFAULT_TIME_ZONE
78
+ end
79
+
80
+ def to_time
81
+ reference_time = time_zone.local(year)
82
+ reference_time + time_in_seconds
83
+ end
84
+
85
+ def <=>(other)
86
+ to_time <=> other.to_time
87
+ end
88
+
89
+ def to_s
90
+ "#{year} #{hour}:#{min}:#{sec} #{time_zone.to_s}"
91
+ end
92
+
93
+ def to_short_s
94
+ "#{hour}:#{min}:#{sec}"
95
+ end
96
+
97
+ def time_in_seconds
98
+ hour * 3600 + min * 60 + sec
99
+ end
100
+
101
+ def add_seconds(sec)
102
+ self.class.from_seconds(self.time_in_seconds + sec, self.year, self.time_zone)
103
+ end
104
+
105
+ def to_decimal
106
+ hour.to_f + (min.to_f/60.0) + (sec.to_f/3600.0)
107
+ end
108
+
109
+ private
110
+
111
111
  end