talia_core 0.4.0

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Files changed (119) hide show
  1. data/README.rdoc +41 -0
  2. data/bin/talia +33 -0
  3. data/lib/JXslt/jxslt.rb +60 -0
  4. data/lib/acts_as_roled.rb +11 -0
  5. data/lib/core_ext/platform.rb +9 -0
  6. data/lib/core_ext/string.rb +6 -0
  7. data/lib/core_ext.rb +1 -0
  8. data/lib/custom_template.rb +4 -0
  9. data/lib/loader_helper.rb +62 -0
  10. data/lib/mysql.rb +1214 -0
  11. data/lib/progressbar.rb +236 -0
  12. data/lib/role.rb +12 -0
  13. data/lib/talia_cl/command_line.rb +39 -0
  14. data/lib/talia_cl/commands/standalone/cl_options.rb +9 -0
  15. data/lib/talia_cl/commands/standalone/standalone_generate.rb +75 -0
  16. data/lib/talia_cl/commands/standalone.rb +25 -0
  17. data/lib/talia_cl/commands/talia_console/cl_options.rb +55 -0
  18. data/lib/talia_cl/commands/talia_console/console_commands.rb +37 -0
  19. data/lib/talia_cl/commands/talia_console/talia_commands.rb +131 -0
  20. data/lib/talia_cl/commands/talia_console.rb +47 -0
  21. data/lib/talia_cl/core_commands.rb +11 -0
  22. data/lib/talia_cl.rb +47 -0
  23. data/lib/talia_core/active_source.rb +372 -0
  24. data/lib/talia_core/active_source_parts/class_methods.rb +378 -0
  25. data/lib/talia_core/active_source_parts/predicate_handler.rb +89 -0
  26. data/lib/talia_core/active_source_parts/rdf.rb +131 -0
  27. data/lib/talia_core/active_source_parts/sql_helper.rb +36 -0
  28. data/lib/talia_core/active_source_parts/xml/base_builder.rb +47 -0
  29. data/lib/talia_core/active_source_parts/xml/generic_reader.rb +363 -0
  30. data/lib/talia_core/active_source_parts/xml/rdf_builder.rb +88 -0
  31. data/lib/talia_core/active_source_parts/xml/source_builder.rb +73 -0
  32. data/lib/talia_core/active_source_parts/xml/source_reader.rb +20 -0
  33. data/lib/talia_core/agent.rb +14 -0
  34. data/lib/talia_core/background_jobs/job.rb +82 -0
  35. data/lib/talia_core/background_jobs/progress_job.rb +68 -0
  36. data/lib/talia_core/collection.rb +13 -0
  37. data/lib/talia_core/data_types/data_loader.rb +92 -0
  38. data/lib/talia_core/data_types/data_record.rb +105 -0
  39. data/lib/talia_core/data_types/delayed_copier.rb +76 -0
  40. data/lib/talia_core/data_types/file_record.rb +59 -0
  41. data/lib/talia_core/data_types/file_store.rb +306 -0
  42. data/lib/talia_core/data_types/iip_data.rb +153 -0
  43. data/lib/talia_core/data_types/iip_loader.rb +127 -0
  44. data/lib/talia_core/data_types/image_data.rb +32 -0
  45. data/lib/talia_core/data_types/media_link.rb +19 -0
  46. data/lib/talia_core/data_types/mime_mapping.rb +45 -0
  47. data/lib/talia_core/data_types/path_helpers.rb +77 -0
  48. data/lib/talia_core/data_types/pdf_data.rb +42 -0
  49. data/lib/talia_core/data_types/simple_text.rb +36 -0
  50. data/lib/talia_core/data_types/temp_file_handling.rb +85 -0
  51. data/lib/talia_core/data_types/xml_data.rb +169 -0
  52. data/lib/talia_core/dc_resource.rb +20 -0
  53. data/lib/talia_core/dummy_handler.rb +34 -0
  54. data/lib/talia_core/dummy_source.rb +20 -0
  55. data/lib/talia_core/errors.rb +25 -0
  56. data/lib/talia_core/initializer.rb +427 -0
  57. data/lib/talia_core/ordered_source.rb +228 -0
  58. data/lib/talia_core/rails_ext/actionpack/action_controller/record_identifier.rb +13 -0
  59. data/lib/talia_core/rails_ext/actionpack/action_controller.rb +1 -0
  60. data/lib/talia_core/rails_ext/actionpack.rb +1 -0
  61. data/lib/talia_core/rails_ext.rb +1 -0
  62. data/lib/talia_core/rdf_import.rb +90 -0
  63. data/lib/talia_core/rdf_resource.rb +159 -0
  64. data/lib/talia_core/semantic_collection_item.rb +93 -0
  65. data/lib/talia_core/semantic_collection_wrapper.rb +324 -0
  66. data/lib/talia_core/semantic_property.rb +7 -0
  67. data/lib/talia_core/semantic_relation.rb +67 -0
  68. data/lib/talia_core/source.rb +323 -0
  69. data/lib/talia_core/source_transfer_object.rb +38 -0
  70. data/lib/talia_core/workflow/base.rb +15 -0
  71. data/lib/talia_core/workflow/publication_workflow.rb +62 -0
  72. data/lib/talia_core/workflow.rb +300 -0
  73. data/lib/talia_core.rb +9 -0
  74. data/lib/talia_dependencies.rb +12 -0
  75. data/lib/talia_util/bar_progressor.rb +15 -0
  76. data/lib/talia_util/configuration/config_file.rb +48 -0
  77. data/lib/talia_util/configuration/database_config.rb +40 -0
  78. data/lib/talia_util/configuration/mysql_database_setup.rb +104 -0
  79. data/lib/talia_util/data_import.rb +91 -0
  80. data/lib/talia_util/image_conversions.rb +82 -0
  81. data/lib/talia_util/import_job_helper.rb +132 -0
  82. data/lib/talia_util/io_helper.rb +54 -0
  83. data/lib/talia_util/progressable.rb +38 -0
  84. data/lib/talia_util/progressbar.rb +236 -0
  85. data/lib/talia_util/rdf_update.rb +80 -0
  86. data/lib/talia_util/some_sigla.xml +1960 -0
  87. data/lib/talia_util/test_helpers.rb +151 -0
  88. data/lib/talia_util/util.rb +226 -0
  89. data/lib/talia_util/yaml_import.rb +80 -0
  90. data/lib/talia_util.rb +13 -0
  91. data/lib/user.rb +116 -0
  92. data/lib/version.rb +15 -0
  93. data/test/core_ext/string_test.rb +11 -0
  94. data/test/custom_template_test.rb +8 -0
  95. data/test/talia_core/active_source_predicate_test.rb +54 -0
  96. data/test/talia_core/active_source_rdf_test.rb +89 -0
  97. data/test/talia_core/active_source_test.rb +631 -0
  98. data/test/talia_core/data_types/data_loader_test.rb +123 -0
  99. data/test/talia_core/data_types/data_record_test.rb +40 -0
  100. data/test/talia_core/data_types/file_record_test.rb +171 -0
  101. data/test/talia_core/data_types/iip_data_test.rb +130 -0
  102. data/test/talia_core/data_types/image_data_test.rb +88 -0
  103. data/test/talia_core/data_types/pdf_data_test.rb +68 -0
  104. data/test/talia_core/data_types/xml_data_test.rb +134 -0
  105. data/test/talia_core/generic_xml_test.rb +83 -0
  106. data/test/talia_core/initializer_test.rb +36 -0
  107. data/test/talia_core/ordered_source_test.rb +398 -0
  108. data/test/talia_core/rdf_resource_test.rb +115 -0
  109. data/test/talia_core/semantic_collection_item_test.rb +129 -0
  110. data/test/talia_core/source_reader_test.rb +33 -0
  111. data/test/talia_core/source_test.rb +484 -0
  112. data/test/talia_core/source_transfer_object_test.rb +24 -0
  113. data/test/talia_core/workflow/publication_workflow_test.rb +242 -0
  114. data/test/talia_core/workflow/user_class_for_workflow.rb +35 -0
  115. data/test/talia_core/workflow/workflow_base_test.rb +21 -0
  116. data/test/talia_core/workflow_test.rb +19 -0
  117. data/test/talia_util/import_job_helper_test.rb +46 -0
  118. data/test/test_helper.rb +68 -0
  119. metadata +262 -0
data/lib/talia_cl.rb ADDED
@@ -0,0 +1,47 @@
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+ # This is the loader file for the Talia command line tool.
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+ #
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+ # The Talia command line works as follows: This file will load some helper
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+ # methods that can be used to register subcommands for the command line tool.
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+ #
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+ # Each subcommand is registered with a name (as symbol), a description string
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+ # and a block that will be run if the command is selected.
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+ #
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+ # If the command line processing is started, the first command line argument
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+ # will be taken as the name of the command to be run. The argument will be
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+ # removed from ARGV, and then the block belonging to the command will be
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+ # executed.
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+ $: << File.join(File.expand_path(File.dirname(__FILE__)), "talia_cl")
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+
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+ # require basic stuff
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+ require "talia_core"
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+ require "talia_util"
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+
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+ include TaliaUtil
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+
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+ require 'command_line'
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+ require 'core_commands'
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+
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+ # Quick and dirty: Try to load the (Rails) add-on commands. If not found, ignore.
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+ begin
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+ require 'addon_commands'
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+ puts "Additional talia commands loaded"
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+ rescue LoadError
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+ puts "No additional talia commands found or loaded."
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+ end
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+
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+
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+ # Runs the command line
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+ def run_command_line
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+ Util::title
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+
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+ command = ARGV.shift
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+
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+ if(TaliaCommandLine::command?(command))
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+ TaliaCommandLine::run_command(command)
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+ else
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+ puts "Use talia <command> - possible commands:"
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+ TaliaCommandLine::each do |command, description|
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+ puts "#{command}\t- #{description}"
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+ end
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+ end
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+ end
@@ -0,0 +1,372 @@
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+ module TaliaCore
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+
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+ # This class encapsulate the basic "Source" behaviour for an element in the
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+ # semantic store. This is the baseclass for all things that are represented
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+ # as an "Resource" (with URL) in the semantic store.
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+ #
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+ # If an object is modified but <b>not</b> saved, the ActiveSource does <b>not</b>
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+ # guarantee that the RDF will always be in sync with the database. However,
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+ # a subsequent saving of the object will re-sync the RDF.
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+ #
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+ # An effort is made to treat RDF and database writes in the same way, so that
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+ # they should <i>usually</i> be in sync:
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+ #
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+ # * Write operations are usually lazy, the data should only be saved once
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+ # save! is called. However, ActiveRecord may still decide that the objects
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+ # need to be saved if they are involved in other operations.
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+ # * Operations that clear a predicate are <b>immediate</b>. That also means
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+ # that using singular property setter, if
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+ # used will immediately erase the old value. If the record is not saved,
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+ # the property will be left empty (and not revert to the original value!)
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+ class ActiveSource < ActiveRecord::Base
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+
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+ # Act like an ActiveRdfResource
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+ include RDFS::ResourceLike
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+
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+ extend ActiveSourceParts::ClassMethods
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+ extend ActiveSourceParts::SqlHelper
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+ include ActiveSourceParts::PredicateHandler
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+ extend ActiveSourceParts::PredicateHandler::ClassMethods
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+ include ActiveSourceParts::Rdf
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+ extend TaliaUtil::Progressable # Progress for import methods on class
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+
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+ # Set the handlers for the callbacks defined in the other modules. The
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+ # order matters here.
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+ after_update :auto_update_rdf
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+ after_create :auto_create_rdf
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+ after_save :save_wrappers # Save the cache wrappers
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+
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+
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+ # Relations where this source is the subject of the triple
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+ has_many :semantic_relations, :foreign_key => 'subject_id', :class_name => 'TaliaCore::SemanticRelation', :dependent => :destroy
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+
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+ # Data records attached to the active source
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+ has_many :data_records, :class_name => 'TaliaCore::DataTypes::DataRecord', :dependent => :destroy, :foreign_key => 'source_id'
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+
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+ # Relations where this source is the object of the relation
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+ has_many :related_subjects,
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+ :foreign_key => 'object_id',
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+ :class_name => 'TaliaCore::SemanticRelation'
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+ has_many :subjects, :through => :related_subjects
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+
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+ validates_format_of :uri, :with => /\A\S*:.*\Z/
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+ validates_uniqueness_of :uri
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+
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+ before_destroy :remove_inverse_properties # Remove inverse properties when destroying an element
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+
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+ # We may wish to use the following Regexp.
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+ # It matches:
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+ # http://discovery-project.eu
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+ # http://www.discovery-project.eu
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+ # http://trac.talia.discovery-project.eu
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+ # http://trac.talia.discovery-project.eu/source
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+ # http://trac.talia.discovery-project.eu/namespace#predicate
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+ #
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+ # validates_format_of :uri,
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+ # :with => /^(http|https):\/\/[a-z0-9\_\-\.]*[a-z0-9_-]{1,}\.[a-z]{2,4}[\/\w\d\_\-\.\?\&\#]*$/i
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+
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+ validate :check_uri
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+
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+ # Helper
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+ def value_for(thing)
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+ self.class.value_for(thing)
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+ end
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+
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+ # To string: Just return the URI. Use to_xml if you need something more
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+ # involved.
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+ def to_s
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+ self[:uri]
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+ end
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+
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+ # Works in the normal way for database attributes. If the value
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+ # is not an attribute, it tries to find objects related to this source
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+ # with the value as a predicate URL and returns a collection of those.
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+ #
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+ # The assignment operator remains as it is for the ActiveRecord.
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+ def [](attribute)
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+ if(db_attr?(attribute))
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+ super(attribute)
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+ else
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+ get_objects_on(attribute)
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+ end
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+ end
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+ alias :get_attribute :[]
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+
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+ # Assignment to an attribute. This will overwrite all current triples.
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+ def []=(attribute, value)
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+ if(db_attr?(attribute))
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+ super(attribute, value)
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+ else
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+ pred = get_attribute(attribute)
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+ pred.remove
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+ pred << value
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+ end
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+ end
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+
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+ # Make aliases for the original updating methods
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+ alias :update_attributes_orig :update_attributes
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+ alias :update_attributes_orig! :update_attributes!
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+
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+ # Updates *all* attributes of this source. For the database attributes, this works
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+ # exactly like ActiveRecord::Base#update_attributes
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+ #
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+ # If semantic attributes are present, they will be updated on the semantic store.
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+ #
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+ # After the update, the source will be saved.
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+ def update_attributes(attributes)
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+ yield self if(block_given?)
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+ super(process_attributes(false, attributes))
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+ end
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+
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+ # As update_attributes, but uses save! to save the source
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+ def update_attributes!(attributes)
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+ yield self if(block_given?)
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+ super(process_attributes(false, attributes))
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+ end
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+
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+ # Works like update_attributes, but will replace the semantic attributes
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+ # rather than adding to them.
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+ def rewrite_attributes(attributes)
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+ yield self if(block_given?)
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+ update_attributes_orig(process_attributes(true, attributes))
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+ end
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+
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+ # Like rewrite_attributes, but calling save!
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+ def rewrite_attributes!(attributes)
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+ yield self if(block_given?)
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+ update_attributes_orig!(process_attributes(true, attributes))
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+ end
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+
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+ # Helper to update semantic attributes from the given hash. If there is a
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+ # "<value>" string, it will be treated as a reference to an URI. Hash
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+ # values may be arrays.
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+ #
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+ # If overwrite is set to yes, the given attributes (and only those)
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+ # are replaced with the values from the hash. Otherwise
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+ # the attribute values will be added to the existing ones
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+ def add_semantic_attributes(overwrite, attributes)
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+ attributes.each do |attr, value|
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+ value = [ value ] unless(value.is_a?(Array))
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+ attr_wrap = self[attr]
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+ attr_wrap.remove if(overwrite)
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+ value.each { |val |self[attr] << target_for(val) }
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+ end
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+ end
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+
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+ # Returns a special object which collects the "inverse" properties
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+ # of the Source - these are all RDF properties which have the current
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+ # Source as the object.
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+ #
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+ # The returned object supports the [] operator, which allows to fetch the
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+ # "inverse" (the RDF subjects) for the given predicate.
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+ #
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+ # Example: <tt>person.inverse[N::FOO::creator]</tt> would return a list of
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+ # all the elements of which the current person is the creator.
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+ def inverse
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+ inverseobj = Object.new
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+ inverseobj.instance_variable_set(:@assoc_source, self)
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+
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+ class << inverseobj
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+
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+ def [](property)
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+ @assoc_source.subjects.find(:all, :conditions => { 'semantic_relations.predicate_uri' => property.to_s } )
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+ end
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+
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+ private :type
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+ end
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+
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+ inverseobj
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+ end
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+
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+ # Accessor that allows to lookup a namespace/name combination. This works like
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+ # the [] method: I will return an array-like object on predicates can be
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+ # manipulated.
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+ def predicate(namespace, name)
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+ get_objects_on(get_namespace(namespace, name))
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+ end
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+
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+ # Setter method for predicates by namespace/name combination. This will
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+ # *add a precdicate triple, not replace one!*
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+ def predicate_set(namespace, name, value)
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+ predicate(namespace, name) << value
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+ end
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+
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+ # Setter method that will only add the value if it doesn't exist already
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+ def predicate_set_uniq(namespace, name, value)
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+ pred = predicate(namespace, name)
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+ pred << value unless(pred.include?(value))
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+ end
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+
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+ # Replaces the given predicate with the value. Good for one-value predicates
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+ def predicate_replace(namespace, name, value)
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+ pred = predicate(namespace, name)
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+ pred.remove
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+ pred << value
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+ end
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+
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+ # Gets the direct predicates (using the database)
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+ def direct_predicates
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+ raise(ActiveRecord::RecordNotFound, "Cannot do this on unsaved record.") if(new_record?)
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+ rels = SemanticRelation.find_by_sql("SELECT DISTINCT predicate_uri FROM semantic_relations WHERE subject_id = #{self.id}")
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+ rels.collect { |rel| N::Predicate.new(rel.predicate_uri) }
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+ end
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+
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+ # Gets the inverse predicates
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+ def inverse_predicates
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+ raise(ActiveRecord::RecordNotFound, "Cannot do this on unsaved record.") if(new_record?)
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+ rels = SemanticRelation.find_by_sql("SELECT DISTINCT predicate_uri FROM semantic_relations WHERE object_id = #{self.id}")
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+ rels.collect { |rel| N::Predicate.new(rel.predicate_uri) }
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+ end
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+
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+ # Returns if the Facsimile is of the given type
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+ def has_type?(type)
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+ (self.types.include?(type))
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+ end
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+
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+ # True if the given attribute is a database attribute
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+ def db_attr?(attribute)
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+ ActiveSource.db_attr?(attribute)
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+ end
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+
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+ # Writes the predicate directly to the database and the rdf store. The
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+ # Source does not need to be saved and no data is loaded from the database.
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+ # This is faster than adding the data normally and doing a full save,
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+ # at least if only one or two predicates are written.
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+ def write_predicate_direct(predicate, value)
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+ autosave = self.autosave_rdf?
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+ value.save! if(value.is_a?(ActiveSource) && value.new_record?)
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+ self.autosave_rdf = false
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+ self[predicate] << value
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+ uri_res = N::URI.new(predicate)
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+ # Now add the RDF data by hand
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+ if(value.kind_of?(Array))
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+ value.each do |v|
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+ my_rdf.direct_write_predicate(uri_res, v)
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+ end
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+ else
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+ my_rdf.direct_write_predicate(uri_res, value)
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+ end
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+ save! # Save without RDF save
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+ self.autosave_rdf = autosave
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+ end
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+
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+
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+ # XML Representation of the source. The object is saved if this is a new
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+ # record.
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+ def to_xml
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+ save! if(new_record?)
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+ ActiveSourceParts::Xml::SourceBuilder.build_source(self)
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+ end
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+
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+ # Creates an RDF/XML resprentation of the source. The object is saved if
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+ # this is a new record.
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+ def to_rdf
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+ save! if(new_record?)
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+ ActiveSourceParts::Xml::RdfBuilder.build_source(self)
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+ end
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+
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+ # Add the additional types to the source that were configured in the class.
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+ # Usually this will not need to be called directly, but will be automatically
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+ # called during construction.
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+ #
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+ # This will check the existing types to avoid duplication
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+ def add_additional_rdf_types
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+ return if(self.class.additional_rdf_types.size == 0) # Avoid database access if there's nothing to do
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+ type_hash = {}
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+ self.types.each { |type| type_hash[type.respond_to?(:uri) ? type.uri.to_s : type.to_s] = true }
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+ self.class.additional_rdf_types.each do |type|
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+ self.types << type unless(type_hash[type.respond_to?(:uri) ? type.uri.to_s : type.to_s])
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+ end
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+ end
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+
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+ # Attaches files from the given hash. See the new method on ActiveSource for the
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+ # details.
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+ #
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+ # The call in this case should look like this:
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+ #
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+ # attach_files([{ url => 'url_or_filename', :options => { .. }}, ...])
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+ #
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+ # Have a look at the DataLoader module to see how the options work. You may also provide
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+ # a single hash for :files (instead of an array) if you have just one file. Files will
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+ # be saved immediately.
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+ def attach_files(files)
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+ files = [ files ] unless(files.is_a?(Array))
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+ files.each do |file|
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+ filename = file[:url] || file['url']
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+ assit(filename)
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+ options = file[:options] || file['options'] || {}
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+ records = DataTypes::FileRecord.create_from_url(filename, options)
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+ records.each { |rec| self.data_records << rec }
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+ end
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+ end
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+
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+ # This will return a list of DataRecord objects. Without parameters, this
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+ # returns all data elements on the source. If a type is given, it will
305
+ # return only the elements of the given type. If both type and location are
306
+ # given, it will retrieve only the specified data element
307
+ def data(type = nil, location= nil)
308
+ find_type = location ? :first : :all # Find just one element if a location is given
309
+ options = {}
310
+ options[:conditions] = [ "type = ?", type ] if(type && !location)
311
+ options[:conditions] = [ "type = ? AND location = ?", type, location ] if(type && location)
312
+ data_records.find(find_type, options)
313
+ end
314
+
315
+ private
316
+
317
+ # Extracts the semantic attributes from the attribute hash and passes them
318
+ # to add_semantic_attributes with the given overwrite flag.
319
+ # The database attributes are returned by the method
320
+ def process_attributes(overwrite, attributes)
321
+ attributes = ActiveSource.split_attribute_hash(attributes)
322
+ add_semantic_attributes(overwrite, attributes[:semantic_attributes])
323
+ attributes[:db_attributes]
324
+ end
325
+
326
+ # Creates the target for the given attribute. If the value
327
+ # has the format <...>, it will be returned as an URI object, if it's a normal
328
+ # string it will be returned as a string.
329
+ def target_for(value)
330
+ return value if(value.kind_of?(N::URI) || value.kind_of?(ActiveSource))
331
+ assit_kind_of(String, value)
332
+ value.strip!
333
+ if((value[0..0] == '<') && (value[-1..-1] == '>'))
334
+ value = ActiveSource.expand_uri(value [1..-2])
335
+ val_src = ActiveSource.find(:first, :conditions => { :uri => value })
336
+ if(!val_src)
337
+ value = DummySource.new(value)
338
+ value.save!
339
+ else
340
+ value = val_src
341
+ end
342
+ end
343
+ value
344
+ end
345
+
346
+ # Get the namespace URI object for the given namespace
347
+ def get_namespace(namespace, name = '')
348
+ namesp_uri = N::Namespace[namespace]
349
+ raise(ArgumentError, "Illegal namespace given #{namespace}") unless(namesp_uri)
350
+ namesp_uri + name.to_s
351
+ end
352
+
353
+ # Takes over the validation for ActiveSources
354
+ def validate
355
+ self.class
356
+ end
357
+
358
+ # Check the uri should be different than N::LOCAL, this could happen when an user
359
+ # leaves the input text blank.
360
+ def check_uri
361
+ self.errors.add(:uri, "Cannot be blank") if self.uri == N::LOCAL.to_s
362
+ end
363
+
364
+ # Remove the inverse properties, to be called before destroy. Doing this
365
+ # through the polymorphic relation automatically could be a bit fishy...
366
+ def remove_inverse_properties
367
+ SemanticRelation.delete_all(["object_type = 'TaliaCore::ActiveSource' AND object_id = ?", self.id])
368
+ end
369
+
370
+ end
371
+
372
+ end