t2-server 0.2.0 → 0.2.1

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data/README.rdoc CHANGED
@@ -1,7 +1,7 @@
1
1
  = Taverna[http://www.taverna.org.uk/] 2 Server Interaction Gem
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2
 
3
3
  Authors:: Robert Haines
4
- Gem Version:: 0.2.0
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+ Gem Version:: 0.2.1
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  API Version:: 2.2a1
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  Contact:: mailto:rhaines@manchester.ac.uk
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  URL:: http://taverna.sourceforge.net/
data/lib/t2server.rb CHANGED
@@ -43,7 +43,7 @@ require 't2server/run'
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43
  # Taverna 2 Server instance.
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44
  module T2Server
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45
  # The version of this library
46
- GEM_VERSION = "0.0.4"
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+ GEM_VERSION = "0.2.1"
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  # The version of the Taverna 2 Server API that this library can interface with
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48
  API_VERSION = "2.2a1"
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  end
data/lib/t2server/run.rb CHANGED
@@ -31,7 +31,6 @@
31
31
  # Author: Robert Haines
32
32
 
33
33
  require 'rexml/document'
34
- include REXML
35
34
 
36
35
  module T2Server
37
36
 
@@ -361,14 +360,14 @@ module T2Server
361
360
  def ls(dir="")
362
361
  dir.strip_path!
363
362
  dir_list = @server.get_run_attribute(@uuid, "#{@links[:wdir]}/#{dir}")
364
- doc = Document.new(dir_list)
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+ doc = REXML::Document.new(dir_list)
365
364
 
366
365
  # compile a list of directory entries stripping the
367
366
  # directory name from the front of each filename
368
367
  dirs = []
369
368
  files = []
370
- XPath.each(doc, "//nss:dir", Namespaces::MAP) {|e| dirs << e.text.split('/')[-1]}
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- XPath.each(doc, "//nss:file", Namespaces::MAP) {|e| files << e.text.split('/')[-1]}
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+ REXML::XPath.each(doc, "//nss:dir", Namespaces::MAP) {|e| dirs << e.text.split('/')[-1]}
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+ REXML::XPath.each(doc, "//nss:file", Namespaces::MAP) {|e| files << e.text.split('/')[-1]}
372
371
  [dirs, files]
373
372
  end
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373
 
@@ -427,9 +426,9 @@ module T2Server
427
426
 
428
427
  # get inputs
429
428
  inputs = @server.get_run_attribute(@uuid, links[:inputs])
430
- doc = Document.new(inputs)
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+ doc = REXML::Document.new(inputs)
431
430
  nsmap = Namespaces::MAP
432
- links[:baclava] = "#{links[:inputs]}/" + XPath.first(doc, "//nsr:baclava", nsmap).attributes["href"].split('/')[-1]
431
+ links[:baclava] = "#{links[:inputs]}/" + REXML::XPath.first(doc, "//nsr:baclava", nsmap).attributes["href"].split('/')[-1]
433
432
 
434
433
  # set io properties
435
434
  links[:io] = "#{links[:listeners]}/io"
@@ -441,20 +440,20 @@ module T2Server
441
440
  end
442
441
 
443
442
  def parse_description(desc)
444
- doc = Document.new(desc)
443
+ doc = REXML::Document.new(desc)
445
444
  nsmap = Namespaces::MAP
446
445
  {
447
- :expiry => XPath.first(doc, "//nsr:expiry", nsmap).attributes["href"].split('/')[-1],
448
- :workflow => XPath.first(doc, "//nsr:creationWorkflow", nsmap).attributes["href"].split('/')[-1],
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- :status => XPath.first(doc, "//nsr:status", nsmap).attributes["href"].split('/')[-1],
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- :createtime => XPath.first(doc, "//nsr:createTime", nsmap).attributes["href"].split('/')[-1],
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- :starttime => XPath.first(doc, "//nsr:startTime", nsmap).attributes["href"].split('/')[-1],
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- :finishtime => XPath.first(doc, "//nsr:finishTime", nsmap).attributes["href"].split('/')[-1],
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- :wdir => XPath.first(doc, "//nsr:workingDirectory", nsmap).attributes["href"].split('/')[-1],
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- :inputs => XPath.first(doc, "//nsr:inputs", nsmap).attributes["href"].split('/')[-1],
455
- :output => XPath.first(doc, "//nsr:output", nsmap).attributes["href"].split('/')[-1],
456
- :securectx => XPath.first(doc, "//nsr:securityContext", nsmap).attributes["href"].split('/')[-1],
457
- :listeners => XPath.first(doc, "//nsr:listeners", nsmap).attributes["href"].split('/')[-1]
446
+ :expiry => REXML::XPath.first(doc, "//nsr:expiry", nsmap).attributes["href"].split('/')[-1],
447
+ :workflow => REXML::XPath.first(doc, "//nsr:creationWorkflow", nsmap).attributes["href"].split('/')[-1],
448
+ :status => REXML::XPath.first(doc, "//nsr:status", nsmap).attributes["href"].split('/')[-1],
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+ :createtime => REXML::XPath.first(doc, "//nsr:createTime", nsmap).attributes["href"].split('/')[-1],
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+ :starttime => REXML::XPath.first(doc, "//nsr:startTime", nsmap).attributes["href"].split('/')[-1],
451
+ :finishtime => REXML::XPath.first(doc, "//nsr:finishTime", nsmap).attributes["href"].split('/')[-1],
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+ :wdir => REXML::XPath.first(doc, "//nsr:workingDirectory", nsmap).attributes["href"].split('/')[-1],
453
+ :inputs => REXML::XPath.first(doc, "//nsr:inputs", nsmap).attributes["href"].split('/')[-1],
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+ :output => REXML::XPath.first(doc, "//nsr:output", nsmap).attributes["href"].split('/')[-1],
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+ :securectx => REXML::XPath.first(doc, "//nsr:securityContext", nsmap).attributes["href"].split('/')[-1],
456
+ :listeners => REXML::XPath.first(doc, "//nsr:listeners", nsmap).attributes["href"].split('/')[-1]
458
457
  }
459
458
  end
460
459
  end
@@ -34,7 +34,6 @@ require 'base64'
34
34
  require 'uri'
35
35
  require 'net/https'
36
36
  require 'rexml/document'
37
- include REXML
38
37
 
39
38
  module T2Server
40
39
 
@@ -394,24 +393,24 @@ module T2Server
394
393
  end
395
394
 
396
395
  def parse_description(desc)
397
- doc = Document.new(desc)
396
+ doc = REXML::Document.new(desc)
398
397
  nsmap = Namespaces::MAP
399
398
  {
400
- :runs => URI.parse(XPath.first(doc, "//nsr:runs", nsmap).attributes["href"]).path,
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- :runlimit => URI.parse(XPath.first(doc, "//nsr:runLimit", nsmap).attributes["href"]).path,
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- :permworkflows => URI.parse(XPath.first(doc, "//nsr:permittedWorkflows", nsmap).attributes["href"]).path,
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- :permlisteners => URI.parse(XPath.first(doc, "//nsr:permittedListeners", nsmap).attributes["href"]).path
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+ :runs => URI.parse(REXML::XPath.first(doc, "//nsr:runs", nsmap).attributes["href"]).path,
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+ :runlimit => URI.parse(REXML::XPath.first(doc, "//nsr:runLimit", nsmap).attributes["href"]).path,
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+ :permworkflows => URI.parse(REXML::XPath.first(doc, "//nsr:permittedWorkflows", nsmap).attributes["href"]).path,
402
+ :permlisteners => URI.parse(REXML::XPath.first(doc, "//nsr:permittedListeners", nsmap).attributes["href"]).path
404
403
  }
405
404
  end
406
405
 
407
406
  def get_runs
408
407
  run_list = get_attribute("#{@links[:runs]}")
409
408
 
410
- doc = Document.new(run_list)
409
+ doc = REXML::Document.new(run_list)
411
410
 
412
411
  # get list of run uuids
413
412
  uuids = []
414
- XPath.each(doc, "//nsr:run", Namespaces::MAP) do |run|
413
+ REXML::XPath.each(doc, "//nsr:run", Namespaces::MAP) do |run|
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414
  uuids << run.attributes["href"].split('/')[-1]
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415
  end
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metadata CHANGED
@@ -1,13 +1,13 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: t2-server
3
3
  version: !ruby/object:Gem::Version
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- hash: 23
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+ hash: 21
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5
  prerelease: false
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  segments:
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7
  - 0
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  - 2
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- - 0
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- version: 0.2.0
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+ - 1
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+ version: 0.2.1
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  platform: ruby
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  authors:
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13
  - Robert Haines
@@ -15,7 +15,7 @@ autorequire:
15
15
  bindir: bin
16
16
  cert_chain: []
17
17
 
18
- date: 2010-09-22 00:00:00 +01:00
18
+ date: 2010-09-23 00:00:00 +01:00
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  default_executable:
20
20
  dependencies:
21
21
  - !ruby/object:Gem::Dependency