sushi_fabric 1.1.8 → 1.1.9
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +8 -2
- data/lib/sushi_fabric/version.rb +1 -1
- metadata +3 -3
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
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---
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2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: a1018e406de9a52abc0c904f94990e5370ae7791cb7460081b6d5f9d38b1292c
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4
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data.tar.gz: e70a1fa7f02f6947ec6752bcd65c55aae2151badc6797d16fa1024a5f13b248d
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5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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metadata.gz: 2425522c912c4d289053d97027d8c53553f1fa0503c610db77b67db7ad4786865c642ea6d5f3d380c41f38df0b0371dd6bb6603927af98f54369e7b9062ac5cb
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7
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data.tar.gz: c165c1dd223dbbb9eb508576935d92e6254611cfabb19654085224a418d2980b9012fa2d8241ac0d6828e6c189718764f9db92e81b76c9c7c95aef5bf086e10d
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@@ -1,6 +1,6 @@
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#!/usr/bin/env ruby
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# encoding: utf-8
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-
# Version = '
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3
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# Version = '20230404-132741'
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require 'csv'
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require 'fileutils'
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@@ -813,6 +813,7 @@ rm -rf #{@scratch_dir} || exit 1
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end
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def save_parameters_in_sushi_db
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815
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if @next_dataset_id and next_dataset = DataSet.find_by_id(@next_dataset_id)
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816
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+
@output_params['sushi_app'] = self.class
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next_dataset.job_parameters = @output_params
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next_dataset.save
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end
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@@ -851,7 +852,12 @@ rm -rf #{@scratch_dir} || exit 1
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else
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"#{@name.gsub(/\s/,'').gsub(/_/,'')}_#{dataset.id}"
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end
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854
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-
data_set_arr =
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855
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data_set_arr = if @params['next_dataset_root']
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856
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{'DataSetName'=>next_dataset_name, 'ProjectNumber'=>@project.gsub(/p/,''), 'Comment'=>@next_dataset_comment.to_s}
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857
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else
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858
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{'DataSetName'=>next_dataset_name, 'ProjectNumber'=>@project.gsub(/p/,''), 'ParentID'=>@dataset_sushi_id, 'Comment'=>@next_dataset_comment.to_s}
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859
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end
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860
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855
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csv = CSV.readlines(@next_dataset_tsv_path, :col_sep=>"\t")
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856
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csv.each do |row|
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if headers.empty?
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data/lib/sushi_fabric/version.rb
CHANGED
metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: sushi_fabric
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version: !ruby/object:Gem::Version
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version: 1.1.
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version: 1.1.9
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platform: ruby
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authors:
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- Functional Genomics Center Zurich
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autorequire:
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bindir: bin
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cert_chain: []
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-
date:
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date: 2023-04-04 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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@@ -84,7 +84,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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-
rubygems_version: 3.
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rubygems_version: 3.3.26
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signing_key:
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specification_version: 4
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summary: workflow manager client.
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