sushi_fabric 1.0.7 → 1.0.8

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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data/lib/sushi_fabric/sushiApp.rb

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20210211-145021'
+# Version = '20210304-164250'
 
 require 'csv'
 require 'fileutils'
@@ -467,12 +467,27 @@ conda activate sushi
       EOS
     end
 
+    src_files = []
+    dest_dirs = []
+    greq = (copy_commands("AAA", "BBB").join =~ /g-req/)
     if @output_files
       @output_files.map{|header| next_dataset[header]}.each do |file|
-        # in actual case, to save under /srv/gstore/
         src_file = File.basename(file)
         dest_dir = File.dirname(File.join(@gstore_dir, file))
+        src_files << src_file
+        dest_dirs << dest_dir
+      end
+      if dest_dirs.uniq.length == 1 and greq
+        src_file = src_files.join(" ")
+        dest_dir = dest_dirs.first
         @out.print copy_commands(src_file, dest_dir).join("\n"), "\n"
+      else
+        @output_files.map{|header| next_dataset[header]}.each do |file|
+          # in actual case, to save under /srv/gstore/
+          src_file = File.basename(file)
+          dest_dir = File.dirname(File.join(@gstore_dir, file))
+          @out.print copy_commands(src_file, dest_dir).join("\n"), "\n"
+        end
       end
     end
     @out.print <<-EOF

data/lib/sushi_fabric/version.rb

@@ -1,3 +1,3 @@
 module SushiFabric
-  VERSION = "1.0.7"
+  VERSION = "1.0.8"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: sushi_fabric
 version: !ruby/object:Gem::Version
-  version: 1.0.7
+  version: 1.0.8
 platform: ruby
 authors:
 - Functional Genomics Center Zurich
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2021-02-11 00:00:00.000000000 Z
+date: 2021-03-04 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler