sushi_fabric 1.0.7 → 1.0.8
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +17 -2
- data/lib/sushi_fabric/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: be295ca72915f5b15f5d1b06c062eedd66c2ebbf392f3e3263483d5b803249a4
|
4
|
+
data.tar.gz: d40e4224538f01ac25adf99eb3c701daf04d22a0a1be0f1a935173f798b23007
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: e141d4d84bf0efea4180f578b345b8daf037bf1fd62147f1ac9e40e1684dcbdecc428994ff651b364ddcc0ec48d8c2d6a6ca952e7ad493ce4d3d3048a695acf2
|
7
|
+
data.tar.gz: d16896e1fabc9c4bb683c0268fbb6908c3b9a8f2fe037b669ce5f7aad89b5c982c21f66f73561be787025d48667fed09f2a4d402a3de5ed7ba4110fd39dea122
|
@@ -1,6 +1,6 @@
|
|
1
1
|
#!/usr/bin/env ruby
|
2
2
|
# encoding: utf-8
|
3
|
-
# Version = '
|
3
|
+
# Version = '20210304-164250'
|
4
4
|
|
5
5
|
require 'csv'
|
6
6
|
require 'fileutils'
|
@@ -467,12 +467,27 @@ conda activate sushi
|
|
467
467
|
EOS
|
468
468
|
end
|
469
469
|
|
470
|
+
src_files = []
|
471
|
+
dest_dirs = []
|
472
|
+
greq = (copy_commands("AAA", "BBB").join =~ /g-req/)
|
470
473
|
if @output_files
|
471
474
|
@output_files.map{|header| next_dataset[header]}.each do |file|
|
472
|
-
# in actual case, to save under /srv/gstore/
|
473
475
|
src_file = File.basename(file)
|
474
476
|
dest_dir = File.dirname(File.join(@gstore_dir, file))
|
477
|
+
src_files << src_file
|
478
|
+
dest_dirs << dest_dir
|
479
|
+
end
|
480
|
+
if dest_dirs.uniq.length == 1 and greq
|
481
|
+
src_file = src_files.join(" ")
|
482
|
+
dest_dir = dest_dirs.first
|
475
483
|
@out.print copy_commands(src_file, dest_dir).join("\n"), "\n"
|
484
|
+
else
|
485
|
+
@output_files.map{|header| next_dataset[header]}.each do |file|
|
486
|
+
# in actual case, to save under /srv/gstore/
|
487
|
+
src_file = File.basename(file)
|
488
|
+
dest_dir = File.dirname(File.join(@gstore_dir, file))
|
489
|
+
@out.print copy_commands(src_file, dest_dir).join("\n"), "\n"
|
490
|
+
end
|
476
491
|
end
|
477
492
|
end
|
478
493
|
@out.print <<-EOF
|
data/lib/sushi_fabric/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: sushi_fabric
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.0.
|
4
|
+
version: 1.0.8
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Functional Genomics Center Zurich
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2021-
|
11
|
+
date: 2021-03-04 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|