sushi_fabric 1.3.0 → 1.3.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +10 -1
- data/lib/sushi_fabric/version.rb +1 -1
- data/lib/sushi_fabric.rb +2 -0
- data/sushi_fabric.gemspec +3 -0
- metadata +31 -3
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
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---
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SHA256:
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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metadata.gz: f7f62a32c7956387ddb637d5ca44147cb681758fccb612e968527e654015eef4
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4
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data.tar.gz: c6e016d50a63ee67817d4b926d3f6dee0aee59153ca38d792f1e029093e3372b
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SHA512:
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metadata.gz:
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7
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data.tar.gz:
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6
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metadata.gz: 0b13c118cda7a72a727da95ac6d0f3a5b468f40e1628569bcb01cc89bea40ab18e60fc799dd1c045bdb54bc5a2654e3d97d41180d0adda3aba035c0d0e93da82
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7
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data.tar.gz: dccf056a1e983858aac59a8f5db4605a03f30ba5b859ba3e05b488dc904881d815ca7a1626b6ceb66b5397f0916b41eec6b6bafe890774586e6ce70a55a271db
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@@ -1,6 +1,6 @@
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#!/usr/bin/env ruby
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# encoding: utf-8
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-
# Version = '
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3
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# Version = '20241122-134036'
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require 'csv'
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require 'fileutils'
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@@ -81,6 +81,8 @@ end
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require "#{SUSHI_APP_DIR}/app/models/data_set"
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require "#{SUSHI_APP_DIR}/app/models/sample"
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require "#{SUSHI_APP_DIR}/app/models/job"
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require "#{SUSHI_APP_DIR}/app/jobs/application_job"
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require "#{SUSHI_APP_DIR}/app/jobs/make_whole_tree_job"
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else
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NO_ROR = true
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end
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@@ -854,6 +856,7 @@ rm -rf #{@scratch_dir} || exit 1
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@next_dataset_tsv_path = save_next_dataset_as_tsv
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855
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if @dataset_sushi_id and dataset = DataSet.find_by_id(@dataset_sushi_id.to_i)
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859
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+
@project_id = dataset.project.id
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data_set_arr = []
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headers = []
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rows = []
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@@ -912,6 +915,12 @@ rm -rf #{@scratch_dir} || exit 1
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new_job.data_set.save
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end
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end
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+
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# Update dataset tree
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if @project_id
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puts "# Update dataset tree by ActiveJob"
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922
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MakeWholeTreeJob.perform_later(@project_id)
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end
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copy_nextdataset
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end
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def run
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data/lib/sushi_fabric/version.rb
CHANGED
data/lib/sushi_fabric.rb
CHANGED
data/sushi_fabric.gemspec
CHANGED
metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: sushi_fabric
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version: !ruby/object:Gem::Version
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version: 1.3.
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version: 1.3.2
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platform: ruby
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authors:
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- Functional Genomics Center Zurich
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autorequire:
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bindir: bin
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cert_chain: []
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date:
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date: 2025-02-14 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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@@ -38,6 +38,34 @@ dependencies:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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- !ruby/object:Gem::Dependency
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name: csv
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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- !ruby/object:Gem::Dependency
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name: drb
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requirement: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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description: This library provides us with the methods to submit a job cooperating
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with workflow manager.
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email:
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@@ -84,7 +112,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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-
rubygems_version: 3.
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rubygems_version: 3.5.22
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signing_key:
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specification_version: 4
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summary: workflow manager client.
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