sushi_fabric 1.2.6 → 1.2.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +6 -7
- data/lib/sushi_fabric/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 625777da16fc54a819726f5b5f82dcf309865c05c11f902a0065dd1d385d7307
|
4
|
+
data.tar.gz: 628bec7e0c32fa99832d35bd2016eaee2bcec4984f71089b23d4b9ebbe7b0c37
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 928ddc2796c22bd809bbadc1b91c2a9aa4b15754b60a64a66d26c387b916386d5df39de3e5f8e42424e101256fe7ce55872521644ba96258b9381ea75cb3e59d
|
7
|
+
data.tar.gz: 2d669efcfc9afce6ffad2f07b18496744d0a4b7b52588c519fe791fb8ee2eb23a4c5c8e48855c037359fd6081ffae54c58e483835ddc0a384ffd1b0c9ce2383a
|
@@ -1,6 +1,6 @@
|
|
1
1
|
#!/usr/bin/env ruby
|
2
2
|
# encoding: utf-8
|
3
|
-
# Version = '
|
3
|
+
# Version = '20240823-112404'
|
4
4
|
|
5
5
|
require 'csv'
|
6
6
|
require 'fileutils'
|
@@ -85,11 +85,6 @@ end
|
|
85
85
|
NO_ROR = true
|
86
86
|
end
|
87
87
|
|
88
|
-
class ::Array
|
89
|
-
def to_h
|
90
|
-
Hash[*flatten]
|
91
|
-
end
|
92
|
-
end
|
93
88
|
class ::Hash
|
94
89
|
attr_reader :defaults
|
95
90
|
alias :set :[]=
|
@@ -711,7 +706,11 @@ rm -rf #{@scratch_dir} || exit 1
|
|
711
706
|
@out.close
|
712
707
|
end
|
713
708
|
def sample_mode
|
714
|
-
selected_samples =
|
709
|
+
selected_samples = unless @params['samples'].empty?
|
710
|
+
Hash[*@params['samples'].split(',').map{|sample_name| [sample_name, true]}.flatten]
|
711
|
+
else
|
712
|
+
Hash[*@dataset_hash.map{|row| row['Name']}.map{|sample_name| [sample_name, true]}.flatten]
|
713
|
+
end
|
715
714
|
@dataset_hash.each_with_index do |row, i|
|
716
715
|
@dataset = Hash[*row.map{|key,value| [key.gsub(/\[.+\]/,'').strip, value]}.flatten]
|
717
716
|
if selected_samples[@dataset['Name']]
|
data/lib/sushi_fabric/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: sushi_fabric
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.2.
|
4
|
+
version: 1.2.8
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Functional Genomics Center Zurich
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2024-08-
|
11
|
+
date: 2024-08-23 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|