sushi_fabric 1.2.1 → 1.2.3

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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+  data.tar.gz: 7f1d59a9197e1c545fd8d3fdf9d98002fc05fd89ecd1651f62e6b238b43038e9
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data/lib/sushi_fabric/sushiApp.rb

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20230622-143640'
+# Version = '20230623-175030'
 
 require 'csv'
 require 'fileutils'
@@ -349,7 +349,9 @@ class SushiApp
   end
   def check_application_parameters
     if @required_params and (@required_params - @params.keys).empty?
-      @output_params = {"sushi_app" => self.class}.merge(@params.clone)
+      # PD, 20230623, the following fix changed parameters.tsv info, and reverted
+      #@output_params = {"sushi_app" => self.class.name}.merge(@params.clone)
+      @output_params = @params.clone
     end
   end
   def set_user_parameters
@@ -588,6 +590,7 @@ rm -rf #{@scratch_dir} || exit 1
   def save_parameters_as_tsv
     file_path = File.join(@scratch_result_dir, @parameter_file)
     CSV.open(file_path, 'w', :col_sep=>"\t") do |out|
+      out << ["sushi_app", self.class.name]
       @output_params.each do |key, value|
         if @output_params[key, 'file_upload'] and !value.to_s.empty?
           uploaded_file_path = File.join(@result_dir, "uploaded", File.basename(value))

data/lib/sushi_fabric/version.rb

@@ -1,3 +1,3 @@
 module SushiFabric
-  VERSION = "1.2.1"
+  VERSION = "1.2.3"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: sushi_fabric
 version: !ruby/object:Gem::Version
-  version: 1.2.1
+  version: 1.2.3
 platform: ruby
 authors:
 - Functional Genomics Center Zurich
 autorequire:
 bindir: bin
 cert_chain: []
-date: 2023-06-22 00:00:00.000000000 Z
+date: 2023-06-23 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler