sushi_fabric 1.1.5 → 1.1.6
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- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +9 -1
- data/lib/sushi_fabric/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 9fedc477c136f74445e146138c9e0aa66be6fb2ab0c01da53c88827f19ac6363
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4
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+
data.tar.gz: 935cee957707889446cbd842e506551cb6269a38f71ad300e3c828bdac6790a0
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 42da71dbf0da6dab834e42f943d2dd0fb8a8a29598e8274927abb2233fc9db15953961adb60fd99ce45ed265ea7d33e3f77949be7c6aaf05c9699d7c69ba94d0
|
7
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+
data.tar.gz: 79f887cb36630cbc1ad3c8d8b1b8c6431348a5707cc83db17572223724ea275e6564c2ca885cbe52b7d427fb1ddafa69cd50db96d101797b266852b088861345
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@@ -1,6 +1,6 @@
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1
1
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#!/usr/bin/env ruby
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2
2
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# encoding: utf-8
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3
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-
# Version = '
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3
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+
# Version = '20220127-101054'
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4
4
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5
5
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require 'csv'
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6
6
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require 'fileutils'
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@@ -590,6 +590,7 @@ rm -rf #{@scratch_dir} || exit 1
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590
590
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uploaded_file_path = File.join(@result_dir, "uploaded", File.basename(value))
|
591
591
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out << [key, uploaded_file_path]
|
592
592
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@params[key] = uploaded_file_path
|
593
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+
@output_params[key] = uploaded_file_path
|
593
594
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else
|
594
595
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out << [key, value]
|
595
596
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end
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@@ -806,6 +807,12 @@ rm -rf #{@scratch_dir} || exit 1
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806
807
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data_set.id
|
807
808
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end
|
808
809
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end
|
810
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+
def save_parameters_in_sushi_db
|
811
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+
if @next_dataset_id and next_dataset = DataSet.find_by_id(@next_dataset_id)
|
812
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+
next_dataset.job_parameters = @output_params
|
813
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+
next_dataset.save
|
814
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+
end
|
815
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+
end
|
809
816
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def main(mock=false)
|
810
817
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## sushi writes creates the job scripts and builds the result data set that is to be generated
|
811
818
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@result_dataset = []
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@@ -852,6 +859,7 @@ rm -rf #{@scratch_dir} || exit 1
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|
852
859
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unless NO_ROR
|
853
860
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@current_user ||= nil
|
854
861
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@next_dataset_id = save_data_set(data_set_arr.to_a.flatten, headers, rows, @current_user, @child)
|
862
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+
save_parameters_in_sushi_db
|
855
863
|
|
856
864
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unless @off_bfabric_registration
|
857
865
|
if next_dataset = DataSet.find_by_id(@next_dataset_id)
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data/lib/sushi_fabric/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: sushi_fabric
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.1.
|
4
|
+
version: 1.1.6
|
5
5
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platform: ruby
|
6
6
|
authors:
|
7
7
|
- Functional Genomics Center Zurich
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2022-01-27 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
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