sushi_fabric 1.0.4 → 1.0.5

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA256:
3
- metadata.gz: 3a9c780f513fc42be122da7a0cb97e5e8c4a70e84af98ea746964a5b7853f1c5
4
- data.tar.gz: 4d14ca10808dbee2401088cc885d77ac2c4040ca73a984993f833b42d049ade8
3
+ metadata.gz: 9fdb24b4bbe247b331be53dd1a57f117e3c44dccd12a52686fc4533e17222451
4
+ data.tar.gz: 30b5cc93c26df8e4a5ce07196774e27d9576ec94f13f95d5286e3acbe40f8c73
5
5
  SHA512:
6
- metadata.gz: 8639f58865956062ecd97f269dd426c2674ada7d602850520b323370150b50e99cfed4a5a60e67fa001fbd9035a806a4ef426f1b7db03fb5312a0fa5d36a412e
7
- data.tar.gz: 0d2f463786f8397c73cba8026cd2b1ac0f4a1fbda5252ca598c39f4aaf81d25c1d6d6c9020739f2c31ecee59857ee5d09ace1f4f9a1aa675694c4cf932273b59
6
+ metadata.gz: 6401d7f668742a1b66dba932c5adb70e8cf82d37da5d57cb3009798aedd32c017a2c6bc63d5a4e1fe8705b53de271c96610306f91f826d36a616e0e3ed0b1208
7
+ data.tar.gz: 5ac2a7cd2b3269b998f9edcf0714b91c904c51a53aecdd658d8d361c59539d6956eb4b932424e77691a38308149bf5858fef2405e88c4798738ebac4af8dccbb
@@ -1,6 +1,6 @@
1
1
  #!/usr/bin/env ruby
2
2
  # encoding: utf-8
3
- # Version = '20210115-105702'
3
+ # Version = '20210121-101344'
4
4
 
5
5
  require 'csv'
6
6
  require 'fileutils'
@@ -411,8 +411,8 @@ class SushiApp
411
411
  @scratch_result_dir + '_temp$$'
412
412
  end
413
413
  hold_jid_option = if @dataset_sushi_id and parent_data_set = DataSet.find_by_id(@dataset_sushi_id.to_i) and !parent_data_set.jobs.empty?
414
- parent_data_set_job_ids = parent_data_set.jobs.map{|job| job.submit_job_id}.join(",")
415
- "#\$ -hold_jid #{parent_data_set_job_ids}"
414
+ parent_data_set_job_ids = parent_data_set.jobs.map{|job| job.submit_job_id}.join(":")
415
+ "#SBATCH --dependency=afterany:#{parent_data_set_job_ids}"
416
416
  else
417
417
  ''
418
418
  end
@@ -1,3 +1,3 @@
1
1
  module SushiFabric
2
- VERSION = "1.0.4"
2
+ VERSION = "1.0.5"
3
3
  end
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: sushi_fabric
3
3
  version: !ruby/object:Gem::Version
4
- version: 1.0.4
4
+ version: 1.0.5
5
5
  platform: ruby
6
6
  authors:
7
7
  - Functional Genomics Center Zurich
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2021-01-15 00:00:00.000000000 Z
11
+ date: 2021-01-21 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: bundler