sushi_fabric 0.9.1 → 0.9.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/sushi_fabric/sushiApp.rb +9 -2
- data/lib/sushi_fabric/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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---
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SHA1:
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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metadata.gz: 1d779ebb90dfe148f547bf8421ca4b065b8e88d4
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4
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data.tar.gz: 2d08ddb2575370f0218989f2ca2be53a5b5c50b4
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5
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SHA512:
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-
metadata.gz:
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data.tar.gz:
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6
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metadata.gz: f96ea2b62e4d7a555e5c1494af34ee133396ee349c63ce71a6bc1209e0c83eefca0e9fbc95e926862d5f47832e39ef93b83cdeb17213213b85cb26619019d121
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7
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data.tar.gz: 82a7a369adca203302a4936c6e973bc73a233eaa9639c6350e262909314819fcd06f14797d2161c2196c90a7527e285bcab0e5a5a50db54abbeca2559cb1783e
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@@ -1,6 +1,6 @@
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#!/usr/bin/env ruby
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# encoding: utf-8
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# Version = '
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3
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# Version = '20190731-142332'
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require 'csv'
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require 'fileutils'
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@@ -649,7 +649,14 @@ rm -rf #{@scratch_dir} || exit 1
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end
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end
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def dataset_mode
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652
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-
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652
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selected_samples = Hash[*@params['samples'].split(',').map{|sample_name| [sample_name, true]}.flatten]
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653
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# for a case of @dataset is used in def next_datast in SUSHIApp
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654
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@dataset = []
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655
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@dataset_hash.each do |row|
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656
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if selected_samples[row['Name']]
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@dataset << row
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658
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end
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end
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@job_script = if @dataset_sushi_id and dataset = DataSet.find_by_id(@dataset_sushi_id.to_i)
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654
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File.join(@job_script_dir, @analysis_category + '_' + dataset.name.gsub(/[\s+,\/]/,'_') + '.sh')
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655
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else
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data/lib/sushi_fabric/version.rb
CHANGED
metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: sushi_fabric
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version: !ruby/object:Gem::Version
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-
version: 0.9.
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version: 0.9.2
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platform: ruby
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authors:
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- Functional Genomics Center Zurich
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autorequire:
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bindir: bin
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cert_chain: []
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-
date: 2019-
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date: 2019-07-31 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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