sushi_fabric 0.6.0 → 0.6.1

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checksums.yaml CHANGED
@@ -1,7 +1,7 @@
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@@ -1,6 +1,6 @@
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  #!/usr/bin/env ruby
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  # encoding: utf-8
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- # Version = '20160715-153019'
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+ # Version = '20160930-163938'
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  require 'csv'
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  require 'fileutils'
@@ -477,7 +477,10 @@ rm -rf #{@scratch_dir} || exit 1
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  headers = @dataset_hash.map{|row| row.keys}.flatten.uniq
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  out << headers
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  @dataset_hash.each do |row|
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- out << headers.map{|header| row[header]}
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+ out << headers.map{|header|
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+ val = row[header]
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+ val.to_s.empty? ? nil:val
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+ }
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  end
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  end
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  file_path
@@ -488,7 +491,10 @@ rm -rf #{@scratch_dir} || exit 1
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  CSV.open(file_path, 'w', :col_sep=>"\t") do |out|
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  out << headers
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  @result_dataset.each do |row_hash|
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- out << headers.map{|header| row_hash[header]}
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+ out << headers.map{|header|
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+ val = row_hash[header]
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+ val.to_s.empty? ? nil:val
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+ }
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  end
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  end
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  file_path
@@ -1,3 +1,3 @@
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  module SushiFabric
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- VERSION = "0.6.0"
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+ VERSION = "0.6.1"
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  end
metadata CHANGED
@@ -1,14 +1,14 @@
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  --- !ruby/object:Gem::Specification
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  name: sushi_fabric
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  version: !ruby/object:Gem::Version
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- version: 0.6.0
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+ version: 0.6.1
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  platform: ruby
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  authors:
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  - Functional Genomics Center Zurich
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2016-07-15 00:00:00.000000000 Z
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+ date: 2016-09-30 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: bundler