sufia-models 4.3.1 → 5.0.0.beta1
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- checksums.yaml +4 -4
- data/app/actors/sufia/generic_file/actor.rb +7 -10
- data/app/jobs/active_fedora_pid_based_job.rb +2 -3
- data/app/jobs/audit_job.rb +28 -31
- data/app/jobs/batch_update_job.rb +9 -8
- data/app/jobs/import_url_job.rb +2 -2
- data/app/models/batch.rb +11 -12
- data/app/models/checksum_audit_log.rb +7 -8
- data/app/models/concerns/sufia/ability.rb +4 -6
- data/app/models/concerns/sufia/collection.rb +4 -5
- data/app/models/concerns/sufia/file_stat_utils.rb +3 -3
- data/app/models/concerns/sufia/generic_file.rb +16 -14
- data/app/models/concerns/sufia/generic_file/audit.rb +50 -31
- data/app/models/concerns/sufia/generic_file/characterization.rb +3 -3
- data/app/models/concerns/sufia/generic_file/derivatives.rb +5 -5
- data/app/models/concerns/sufia/generic_file/full_text_indexing.rb +2 -2
- data/app/models/concerns/sufia/generic_file/metadata.rb +82 -11
- data/app/models/concerns/sufia/generic_file/proxy_deposit.rb +12 -3
- data/app/models/concerns/sufia/generic_file/versions.rb +1 -4
- data/app/models/concerns/sufia/generic_file/web_form.rb +13 -6
- data/app/models/concerns/sufia/model_methods.rb +11 -9
- data/app/models/concerns/sufia/user.rb +11 -28
- data/app/models/datastreams/file_content_datastream.rb +1 -1
- data/app/models/datastreams/fits_datastream.rb +1 -1
- data/app/models/file_download_stat.rb +2 -2
- data/app/models/file_usage.rb +5 -9
- data/app/models/file_view_stat.rb +2 -2
- data/app/models/local_authority.rb +2 -2
- data/app/models/proxy_deposit_request.rb +1 -1
- data/app/services/sufia/id_service.rb +5 -5
- data/app/services/sufia/noid.rb +10 -7
- data/lib/generators/sufia/models/cached_stats_generator.rb +31 -2
- data/lib/generators/sufia/models/install_generator.rb +31 -11
- data/lib/generators/sufia/models/proxies_generator.rb +31 -2
- data/lib/generators/sufia/models/templates/config/sufia.rb +10 -3
- data/lib/generators/sufia/models/upgrade400_generator.rb +33 -2
- data/lib/sufia/models/engine.rb +13 -4
- data/lib/sufia/models/file_content/versions.rb +12 -8
- data/lib/sufia/models/version.rb +1 -1
- data/lib/sufia/permissions/writable.rb +34 -16
- data/sufia-models.gemspec +4 -2
- metadata +91 -79
- data/app/models/concerns/sufia/generic_file/reload_on_save.rb +0 -18
- data/app/models/concerns/sufia/properties_datastream_behavior.rb +0 -32
- data/app/models/concerns/sufia/user_usage_stats.rb +0 -15
- data/app/models/datastreams/batch_rdf_datastream.rb +0 -6
- data/app/models/datastreams/generic_file_rdf_datastream.rb +0 -69
- data/app/models/datastreams/paranoid_rights_datastream.rb +0 -22
- data/app/models/datastreams/properties_datastream.rb +0 -4
- data/app/models/sufia/orcid_validator.rb +0 -8
- data/app/models/user_stat.rb +0 -2
- data/lib/generators/sufia/models/abstract_migration_generator.rb +0 -30
- data/lib/generators/sufia/models/orcid_field_generator.rb +0 -19
- data/lib/generators/sufia/models/templates/migrations/add_orcid_to_users.rb +0 -5
- data/lib/generators/sufia/models/templates/migrations/create_user_stats.rb +0 -19
- data/lib/generators/sufia/models/user_stats_generator.rb +0 -31
- data/lib/sufia/models/stats/user_stat_importer.rb +0 -85
- data/lib/tasks/stats_tasks.rake +0 -12
@@ -9,10 +9,10 @@ class LocalAuthority < ActiveRecord::Base
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9
9
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return unless self.where(name: name).empty?
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10
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authority = self.create(name: name)
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11
11
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format = opts.fetch(:format, :ntriples)
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12
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-
predicate = opts.fetch(:predicate, RDF::SKOS.prefLabel)
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12
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+
predicate = opts.fetch(:predicate, ::RDF::SKOS.prefLabel)
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13
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entries = []
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14
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sources.each do |uri|
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15
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-
RDF::Reader.open(uri, format: format) do |reader|
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+
::RDF::Reader.open(uri, format: format) do |reader|
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reader.each_statement do |statement|
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if statement.predicate == predicate
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entries << LocalAuthorityEntry.new(local_authority: authority,
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@@ -78,7 +78,7 @@ class ProxyDepositRequest < ActiveRecord::Base
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78
78
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def title
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return 'file not found' if deleted_file?
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81
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-
query = ActiveFedora::
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81
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+
query = ActiveFedora::SolrQueryBuilder.construct_query_for_ids([pid])
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82
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solr_response = ActiveFedora::SolrService.query(query, raw: true)
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SolrDocument.new(solr_response['response']['docs'].first, solr_response).title
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84
84
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end
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@@ -9,11 +9,11 @@ module Sufia
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9
9
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10
10
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@minter = ::Noid::Minter.new(template: noid_template)
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11
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@pid = $$
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-
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12
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+
#@namespace = Sufia.config.id_namespace
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@semaphore = Mutex.new
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14
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def self.valid?(identifier)
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# remove the fedora namespace since it's not part of the noid
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-
noid = identifier
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+
noid = identifier#.split(":").last
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return @minter.valid? noid
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end
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def self.mint
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@@ -28,20 +28,20 @@ module Sufia
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protected
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29
29
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30
30
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def self.next_id
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-
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31
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+
id = ''
|
32
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File.open(Sufia.config.minter_statefile, File::RDWR|File::CREAT, 0644) do |f|
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f.flock(File::LOCK_EX)
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yaml = YAML::load(f.read)
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yaml = {template: noid_template} unless yaml
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36
36
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minter = ::Noid::Minter.new(yaml)
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-
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37
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+
id = minter.mint
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f.rewind
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yaml = YAML::dump(minter.dump)
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f.write yaml
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f.flush
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f.truncate(f.pos)
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end
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-
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+
id
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end
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end
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end
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data/app/services/sufia/noid.rb
CHANGED
@@ -2,16 +2,14 @@ module Sufia
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2
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module Noid
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3
3
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extend ActiveSupport::Concern
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4
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5
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-
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6
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-
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7
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-
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8
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-
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9
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-
Sufia::IdService.mint
|
10
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-
end
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5
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+
## This overrides the default behavior, which is to ask Fedora for a pid
|
6
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+
# @see ActiveFedora::Sharding.assign_pid
|
7
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+
def assign_pid
|
8
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+
Sufia::IdService.mint
|
11
9
|
end
|
12
10
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|
13
11
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def noid
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14
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-
Noid.noidify(
|
12
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+
Noid.noidify(id)
|
15
13
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end
|
16
14
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|
17
15
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# Redefine this for more intuitive keys in Redis
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@@ -24,6 +22,11 @@ module Sufia
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24
22
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String(identifier).split(":").last
|
25
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end
|
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24
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|
25
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+
# Create a pairtree like path for the given identifier
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26
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+
def treeify(identifier)
|
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+
(identifier.scan(/..?/).first(4) + [identifier]).join('/')
|
28
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+
end
|
29
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+
|
27
30
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def namespaceize(identifier)
|
28
31
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return identifier if identifier.include?(':')
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29
32
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"#{namespace}:#{identifier}"
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@@ -1,12 +1,30 @@
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1
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-
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1
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+
# -*- encoding : utf-8 -*-
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2
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+
require 'rails/generators'
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+
require 'rails/generators/migration'
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4
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+
|
5
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+
class Sufia::Models::CachedStatsGenerator < Rails::Generators::Base
|
6
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+
include Rails::Generators::Migration
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2
7
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|
3
|
-
class Sufia::Models::CachedStatsGenerator < Sufia::Models::AbstractMigrationGenerator
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4
8
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source_root File.expand_path('../templates', __FILE__)
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5
9
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|
6
10
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desc """
|
7
11
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This generator adds the ability to cache usage stats to your application:
|
8
12
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1. Creates several database migrations if they do not exist in /db/migrate
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9
13
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"""
|
14
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+
# Implement the required interface for Rails::Generators::Migration.
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15
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+
# taken from http://github.com/rails/rails/blob/master/activerecord/lib/generators/active_record.rb
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16
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+
def self.next_migration_number(path)
|
17
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+
if @prev_migration_nr
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18
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+
@prev_migration_nr += 1
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19
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+
else
|
20
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+
if last_migration = Dir[File.join(path, '*.rb')].sort.last
|
21
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+
@prev_migration_nr = last_migration.sub(File.join(path, '/'), '').to_i + 1
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22
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+
else
|
23
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+
@prev_migration_nr = Time.now.utc.strftime("%Y%m%d%H%M%S").to_i
|
24
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+
end
|
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+
end
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+
@prev_migration_nr.to_s
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+
end
|
10
28
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|
11
29
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def banner
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12
30
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say_status("warning", "ADDING STATS CACHING-RELATED SUFIA MODELS", :yellow)
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@@ -14,6 +32,7 @@ This generator adds the ability to cache usage stats to your application:
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14
32
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|
15
33
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# Setup the database migrations
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16
34
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def copy_migrations
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35
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+
# Can't get this any more DRY, because we need this order.
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36
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[
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18
37
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'create_file_view_stats.rb',
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19
38
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'create_file_download_stats.rb'
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@@ -21,4 +40,14 @@ This generator adds the ability to cache usage stats to your application:
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21
40
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better_migration_template file
|
22
41
|
end
|
23
42
|
end
|
43
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+
|
44
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+
private
|
45
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+
|
46
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+
def better_migration_template(file)
|
47
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+
begin
|
48
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+
migration_template "migrations/#{file}", "db/migrate/#{file}"
|
49
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+
rescue Rails::Generators::Error => e
|
50
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+
say_status("warning", e.message, :yellow)
|
51
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+
end
|
52
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+
end
|
24
53
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end
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@@ -1,7 +1,12 @@
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1
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-
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1
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+
# -*- encoding : utf-8 -*-
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2
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+
require 'rails/generators'
|
3
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+
require 'rails/generators/migration'
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4
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+
|
5
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+
class Sufia::Models::InstallGenerator < Rails::Generators::Base
|
6
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+
include Rails::Generators::Migration
|
2
7
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|
3
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-
class Sufia::Models::InstallGenerator < Sufia::Models::AbstractMigrationGenerator
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4
8
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source_root File.expand_path('../templates', __FILE__)
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9
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+
|
5
10
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argument :model_name, type: :string , default: "user"
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6
11
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desc """
|
7
12
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This generator makes the following changes to your application:
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@@ -14,15 +19,30 @@ This generator makes the following changes to your application:
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14
19
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7. Runs full-text generator
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8. Runs proxies generator
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9. Runs cached stats generator
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-
10. Runs ORCID field generator
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18
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-
11. Runs user stats generator
|
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22
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"""
|
23
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+
|
24
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+
# Implement the required interface for Rails::Generators::Migration.
|
25
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+
# taken from http://github.com/rails/rails/blob/master/activerecord/lib/generators/active_record.rb
|
26
|
+
def self.next_migration_number(path)
|
27
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+
if @prev_migration_nr
|
28
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+
@prev_migration_nr += 1
|
29
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+
else
|
30
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+
if last_migration = Dir[File.join(path, '*.rb')].sort.last
|
31
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+
@prev_migration_nr = last_migration.sub(File.join(path, '/'), '').to_i + 1
|
32
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+
else
|
33
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+
@prev_migration_nr = Time.now.utc.strftime("%Y%m%d%H%M%S").to_i
|
34
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+
end
|
35
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+
end
|
36
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+
@prev_migration_nr.to_s
|
37
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+
end
|
38
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+
|
20
39
|
def banner
|
21
40
|
say_status("warning", "GENERATING SUFIA MODELS", :yellow)
|
22
41
|
end
|
23
42
|
|
24
43
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# Setup the database migrations
|
25
44
|
def copy_migrations
|
45
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+
# Can't get this any more DRY, because we need this order.
|
26
46
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[
|
27
47
|
"acts_as_follower_migration.rb",
|
28
48
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"add_social_to_users.rb",
|
@@ -94,13 +114,13 @@ This generator makes the following changes to your application:
|
|
94
114
|
generate 'sufia:models:cached_stats'
|
95
115
|
end
|
96
116
|
|
97
|
-
|
98
|
-
def orcid_field
|
99
|
-
generate 'sufia:models:orcid_field'
|
100
|
-
end
|
117
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+
private
|
101
118
|
|
102
|
-
|
103
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-
|
104
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-
|
119
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+
def better_migration_template(file)
|
120
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+
begin
|
121
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+
migration_template "migrations/#{file}", "db/migrate/#{file}"
|
122
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+
rescue Rails::Generators::Error => e
|
123
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+
say_status("warning", e.message, :yellow)
|
124
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+
end
|
105
125
|
end
|
106
126
|
end
|
@@ -1,12 +1,30 @@
|
|
1
|
-
|
1
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+
# -*- encoding : utf-8 -*-
|
2
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+
require 'rails/generators'
|
3
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+
require 'rails/generators/migration'
|
4
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+
|
5
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+
class Sufia::Models::ProxiesGenerator < Rails::Generators::Base
|
6
|
+
include Rails::Generators::Migration
|
2
7
|
|
3
|
-
class Sufia::Models::ProxiesGenerator < Sufia::Models::AbstractMigrationGenerator
|
4
8
|
source_root File.expand_path('../templates', __FILE__)
|
5
9
|
|
6
10
|
desc """
|
7
11
|
This generator adds proxies and transfers to your application:
|
8
12
|
1. Creates several database migrations if they do not exist in /db/migrate
|
9
13
|
"""
|
14
|
+
# Implement the required interface for Rails::Generators::Migration.
|
15
|
+
# taken from http://github.com/rails/rails/blob/master/activerecord/lib/generators/active_record.rb
|
16
|
+
def self.next_migration_number(path)
|
17
|
+
if @prev_migration_nr
|
18
|
+
@prev_migration_nr += 1
|
19
|
+
else
|
20
|
+
if last_migration = Dir[File.join(path, '*.rb')].sort.last
|
21
|
+
@prev_migration_nr = last_migration.sub(File.join(path, '/'), '').to_i + 1
|
22
|
+
else
|
23
|
+
@prev_migration_nr = Time.now.utc.strftime("%Y%m%d%H%M%S").to_i
|
24
|
+
end
|
25
|
+
end
|
26
|
+
@prev_migration_nr.to_s
|
27
|
+
end
|
10
28
|
|
11
29
|
def banner
|
12
30
|
say_status("warning", "ADDING PROXY/TRANSFER-RELATED SUFIA MODELS", :yellow)
|
@@ -14,6 +32,7 @@ This generator adds proxies and transfers to your application:
|
|
14
32
|
|
15
33
|
# Setup the database migrations
|
16
34
|
def copy_migrations
|
35
|
+
# Can't get this any more DRY, because we need this order.
|
17
36
|
[
|
18
37
|
'create_proxy_deposit_rights.rb',
|
19
38
|
'create_proxy_deposit_requests.rb'
|
@@ -21,4 +40,14 @@ This generator adds proxies and transfers to your application:
|
|
21
40
|
better_migration_template file
|
22
41
|
end
|
23
42
|
end
|
43
|
+
|
44
|
+
private
|
45
|
+
|
46
|
+
def better_migration_template(file)
|
47
|
+
begin
|
48
|
+
migration_template "migrations/#{file}", "db/migrate/#{file}"
|
49
|
+
rescue Rails::Generators::Error => e
|
50
|
+
say_status("warning", e.message, :yellow)
|
51
|
+
end
|
52
|
+
end
|
24
53
|
end
|
@@ -93,9 +93,6 @@ Sufia.config do |config|
|
|
93
93
|
# Specify a Google Analytics tracking ID to gather usage statistics
|
94
94
|
# config.google_analytics_id = 'UA-99999999-1'
|
95
95
|
|
96
|
-
# Specify a date you wish to start collecting Google Analytic statistics for.
|
97
|
-
# config.analytic_start_date = DateTime.new(2014,9,10)
|
98
|
-
|
99
96
|
# Where to store tempfiles, leave blank for the system temp directory (e.g. /tmp)
|
100
97
|
# config.temp_file_base = '/home/developer1'
|
101
98
|
|
@@ -111,6 +108,16 @@ Sufia.config do |config|
|
|
111
108
|
# Specify how many seconds back from the current time that we should show by default of the user's activity on the user's dashboard
|
112
109
|
# config.activity_to_show_default_seconds_since_now = 24*60*60
|
113
110
|
|
111
|
+
# Specify a date you wish to start collecting Google Analytic statistics for.
|
112
|
+
# Leaving it blank will set the start date to when ever the file was uploaded by
|
113
|
+
# NOTE: if you have always sent analytics to GA for downloads and page views leave this commented out
|
114
|
+
# config.analytic_start_date = DateTime.new(2014,9,10)
|
115
|
+
#
|
116
|
+
# Method of converting pids into URIs for storage in Fedora
|
117
|
+
# config.translate_uri_to_id = lambda { |uri| uri.to_s.split('/')[-1] }
|
118
|
+
# config.translate_id_to_uri = lambda { |id|
|
119
|
+
# "#{ActiveFedora.fedora.host}#{ActiveFedora.fedora.base_path}/#{Sufia::Noid.treeify(id)}" }
|
120
|
+
|
114
121
|
# If browse-everything has been configured, load the configs. Otherwise, set to nil.
|
115
122
|
begin
|
116
123
|
if defined? BrowseEverything
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# -*- encoding : utf-8 -*-
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require 'rails/generators'
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require 'rails/generators/migration'
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class Sufia::Models::Upgrade400Generator < Rails::Generators::Base
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include Rails::Generators::Migration
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class Sufia::Models::Upgrade400Generator < Sufia::Models::AbstractMigrationGenerator
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source_root File.expand_path('../templates', __FILE__)
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argument :model_name, type: :string , default: "user"
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desc """
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This generator for upgrading sufia-models from 3.7.2 to 4.0 makes the following changes to your application:
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1. Creates several database migrations if they do not exist in /db/migrate
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4. Runs full-text generator
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"""
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# Implement the required interface for Rails::Generators::Migration.
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# taken from http://github.com/rails/rails/blob/master/activerecord/lib/generators/active_record.rb
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def self.next_migration_number(path)
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if @prev_migration_nr
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@prev_migration_nr += 1
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else
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if last_migration = Dir[File.join(path, '*.rb')].sort.last
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@prev_migration_nr = last_migration.sub(File.join(path, '/'), '').to_i + 1
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else
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@prev_migration_nr = Time.now.utc.strftime("%Y%m%d%H%M%S").to_i
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end
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end
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@prev_migration_nr.to_s
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end
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def banner
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say_status("warning", "UPGRADING SUFIA MODELS", :yellow)
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end
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# Setup the database migrations
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def copy_migrations
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# Can't get this any more DRY, because we need this order.
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[
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'create_tinymce_assets.rb',
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'create_content_blocks.rb',
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def full_text_indexing
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generate "sufia:models:fulltext"
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end
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private
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def better_migration_template(file)
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begin
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migration_template "migrations/#{file}", "db/migrate/#{file}"
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rescue Rails::Generators::Error => e
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say_status("warning", e.message, :yellow)
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end
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end
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end
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data/lib/sufia/models/engine.rb
CHANGED
@@ -31,6 +31,10 @@ module Sufia
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# Defaulting analytic start date to when ever the file was uploaded by leaving it blank
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config.analytic_start_date = nil
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config.translate_uri_to_id = lambda { |uri| uri.to_s.split('/')[-1] }
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config.translate_id_to_uri = lambda { |id|
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"#{ActiveFedora.fedora.host}#{ActiveFedora.fedora.base_path}/#{Sufia::Noid.treeify(id)}" }
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config.autoload_paths += %W(
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#{config.root}/app/models/datastreams
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)
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end
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initializer 'configure' do
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Sufia.config.tap do |c|
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Hydra::Derivatives.ffmpeg_path = c.ffmpeg_path
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Hydra::Derivatives.temp_file_base = c.temp_file_base
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Hydra::Derivatives.fits_path = c.fits_path
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Hydra::Derivatives.enable_ffmpeg = c.enable_ffmpeg
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ActiveFedora::Base.translate_uri_to_id = c.translate_uri_to_id
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ActiveFedora::Base.translate_id_to_uri = c.translate_id_to_uri
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end
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end
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end
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end
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@@ -1,23 +1,27 @@
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module Sufia
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module FileContent
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module Versions
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extend ActiveSupport::Concern
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included do
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has_many_versions
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end
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def latest_version
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versions.last.label unless versions.empty?
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end
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def version_committer(version)
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vc = VersionCommitter.where(
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datastream_id: version.dsid,
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version_id: version.versionID)
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vc = VersionCommitter.where(version_id: version)
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return vc.empty? ? nil : vc.first.committer_login
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end
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def save
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super.tap do |passing|
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create_version if passing
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end
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end
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end
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end
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end
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data/lib/sufia/models/version.rb
CHANGED
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include Hydra::AccessControls::Visibility
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included do
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has_metadata "rightsMetadata", type: ParanoidRightsDatastream
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validate :paranoid_permissions
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end
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def paranoid_permissions
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valid = true
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VALIDATIONS.each do |validation|
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if validation[:condition].call(self)
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errors[validation[:key]] ||= []
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errors[validation[:key]] << validation[:message]
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valid = false
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end
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end
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return valid
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end
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VALIDATIONS = [
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{key: :edit_users, message: 'Depositor must have edit access', condition: lambda { |obj| !obj.edit_users.include?(obj.depositor) }},
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{key: :edit_groups, message: 'Public cannot have edit access', condition: lambda { |obj| obj.edit_groups.include?('public') }},
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{key: :edit_groups, message: 'Registered cannot have edit access', condition: lambda { |obj| obj.edit_groups.include?('registered') }}
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]
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params[:user].each { |name, access| perm_hash['person'][name] = access} if params[:user]
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params[:group].each { |name, access| perm_hash['group'][name] = access if ['read', 'edit'].include?(access)} if params[:group]
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def clear_permissions!
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self.permissions = []
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end
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## Updates those permissions that are provided to it. Does not replace any permissions unless they are provided
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# def permissions=(params)
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# raise "Fixme #{params}"
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# perm_hash = permission_hash
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# params[:new_user_name].each { |name, access| perm_hash['person'][name] = access } if params[:new_user_name].present?
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# params[:new_group_name].each { |name, access| perm_hash['group'][name] = access } if params[:new_group_name].present?
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# params[:user].each { |name, access| perm_hash['person'][name] = access} if params[:user]
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# params[:group].each { |name, access| perm_hash['group'][name] = access if ['read', 'edit'].include?(access)} if params[:group]
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# # rightsMetadata.update_permissions(perm_hash)
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# end
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# def permissions
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# raise "Fixme "
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# perms = super
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# perms.map {|p| { name: p.name, access: p.access, type:p.type } }
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# end
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private
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