suffix_tree 0.0.1

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Files changed (46) hide show
  1. checksums.yaml +7 -0
  2. data/lib/data/base_data_source.rb +44 -0
  3. data/lib/data/data_source_factory.rb +16 -0
  4. data/lib/data/file_data_source.rb +29 -0
  5. data/lib/data/line_state_machine.rb +86 -0
  6. data/lib/data/string_data_source.rb +31 -0
  7. data/lib/data/word_data_source.rb +229 -0
  8. data/lib/location.rb +165 -0
  9. data/lib/node.rb +63 -0
  10. data/lib/node_factory.rb +169 -0
  11. data/lib/persist/suffix_tree_db.rb +148 -0
  12. data/lib/search/searcher.rb +68 -0
  13. data/lib/suffix_linker.rb +16 -0
  14. data/lib/suffix_tree.rb +122 -0
  15. data/lib/visitor/base_visitor.rb +17 -0
  16. data/lib/visitor/bfs.rb +22 -0
  17. data/lib/visitor/data_source_visitor.rb +15 -0
  18. data/lib/visitor/dfs.rb +34 -0
  19. data/lib/visitor/k_common_visitor.rb +71 -0
  20. data/lib/visitor/leaf_count_visitor.rb +15 -0
  21. data/lib/visitor/node_count_visitor.rb +16 -0
  22. data/lib/visitor/numbering_visitor.rb +230 -0
  23. data/lib/visitor/suffix_offset_visitor.rb +23 -0
  24. data/lib/visitor/tree_print_visitor.rb +44 -0
  25. data/lib/visitor/value_depth_visitor.rb +34 -0
  26. data/spec/constant_lca_spec.rb +27 -0
  27. data/spec/data_source_spec.rb +51 -0
  28. data/spec/fixtures/arizona.txt +1 -0
  29. data/spec/fixtures/chapter1.txt +371 -0
  30. data/spec/fixtures/chapter1.txt.summary +3 -0
  31. data/spec/fixtures/chapter1.txt.values +0 -0
  32. data/spec/fixtures/chapter1.txt.words +1329 -0
  33. data/spec/fixtures/mississippi.txt +1 -0
  34. data/spec/fixtures/singlePara.txt +41 -0
  35. data/spec/fixtures/smallFile.txt +3 -0
  36. data/spec/fixtures/smallFile.txt.summary +2 -0
  37. data/spec/fixtures/smallFile.txt.values +0 -0
  38. data/spec/fixtures/smallFile.txt.words +14 -0
  39. data/spec/fixtures/testbook.txt +5414 -0
  40. data/spec/location_spec.rb +149 -0
  41. data/spec/node_factory_spec.rb +199 -0
  42. data/spec/search_spec.rb +182 -0
  43. data/spec/suffix_tree_spec.rb +270 -0
  44. data/spec/util_spec.rb +47 -0
  45. data/spec/visitor_spec.rb +310 -0
  46. metadata +87 -0
@@ -0,0 +1,371 @@
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+ CHAPTER I.
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+
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+ MY HOME IN ASIA MINOR.
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+
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+
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+ My Asiatic origin--My great-grandfather's religious
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+ order--His miracles--My grandfather and Sultan Mahmud
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+ II.--An ordeal by wine--My father's charitable
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+ extravagance--His death--Primitive surgery in Asia
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+ Minor--The original home of vaccination--My mother's
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+ European ancestors--Writing a forbidden accomplishment
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+ for women.
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+
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+ I was born in the ancient town of Angora, Asia Minor, famous not alone
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+ for its silky-haired cats and goats, but also for its historical and
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+ archæological importance, and with it my memories of early days, and
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+ therefore the pages of my desultory journal, naturally begin. Men
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+ of learning who have engaged in researches into the archæology and
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+ biblical history of Asia Minor have come to the conclusion that this
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+ town was once in the remote past the principal centre of a wandering
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+ branch of the Celtic peoples who ultimately settled in Asia Minor.
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+ Although, of course, it was conquered and held during later generations
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+ by the Eastern invaders, it is even nowadays noticeable that there
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+ is a difference, both of character and physique, between most of
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+ the inhabitants of our province and those of other provinces, more
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+ especially of Southern and Eastern Asia Minor. By remarking on this I
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+ do not wish to seem to be trying to trace my origin to a European race,
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+ though I am aware that many people in this country are unsympathetic,
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+ and even, perhaps, prejudiced, where Orientals are concerned. My
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+ paternal ancestors came across from Central Asia, and first settled in
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+ Khorassan, in Persia. But as they were devout followers of the orthodox
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+ creed of the Arabian Prophet they were subjected to the intolerant
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+ oppression of the Persian Moslems, between whom and the orthodox
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+ believers the history of Western Asia records many a sanguinary
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+ feud, the result of their doctrinal antagonism. My ancestors were
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+ compelled eventually to emigrate to Asia Minor over a hundred and
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+ fifty years ago, and there they found a more hospitable reception. My
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+ great-grandfather was the sheikh or head of a religious order called
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+ _Halvati_, or, to give the name an English equivalent, "those who
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+ worship in seclusion." The name arises from one of the strict rules
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+ of the order, that its rites must not be displayed to the outside
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+ public, doubtless a measure for the prevention of hypocrisy. Historical
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+ research has traced the foundation of the order to Ali, the son-in-law
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+ of Mohammed. Shortly after settling in Asia Minor the disciples of
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+ the great sheikh increased to a number approaching eighty thousand,
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+ and pilgrims came to his monastic dwelling from all the neighbouring
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+ provinces. It was not only in Anatolia and Syria that his name was
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+ honoured; he is mentioned with reverence in the books written in Egypt
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+ at that time. It must not be imagined that he was a kind of _Mahdi_,
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+ a name which is familiar in England on account of its having been
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+ assumed by the late pretender in the Soudan. In the days gone by many
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+ such Mahdis, or "redeemers," appeared in Western Asia and the Northern
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+ half of Africa, disguising under this apostolic name their ambition of
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+ attaining temporal power and worldly glory.
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+
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+ In spite of his having so great a number of disciples, my
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+ great-grandfather lived, together with his immediate devotees, in
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+ complete retirement. The Ottoman Sovereign of the time heard of him
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+ and sent a messenger informing him that he wished to grant certain
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+ pious endowments to his monastic institution in the little town of
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+ Tcherkesh, which is situated half-way between Angora and the Black
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+ Sea coast. My great-grandfather declined to receive such unnecessary
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+ worldly assistance, and, according to one of the traditions concerning
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+ his miraculous doings which used to be related in our family circle,
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+ he struck his staff against the wall in the presence of the envoy of
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+ the sovereign, and thereupon a stream of precious metal began to flow
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+ down. He said to the envoy (who became a devoted disciple later on)
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+ that he needed not such worldly things. There is another anecdote of
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+ him which was told in my younger days. There was in our house a large
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+ deerskin upon which my father used to prostrate himself during his
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+ prayers. I often heard it said that this was the skin of the deer upon
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+ which my great-grandfather, the holy hermit, was accustomed to ride
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+ every Friday, the Sabbath day of our people, from his home in Asia
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+ Minor to Mecca, in Arabia, to attend the Friday service in the sacred
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+ sepulchre of the Prophet (on whose shrine be blessing!). Of course, I
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+ quite believed these legends in my childhood. I can make no comment on
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+ them now. "The responsibility of vouching for the fact lies with the
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+ narrator," is an Arab saying often quoted by our Oriental historians
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+ in relating extraordinary events. I must follow their example. It has,
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+ however, always been a great grief to me that along with the deerskin
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+ we did not inherit that useful staff.
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+
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+ My grandfather, whose views in his early days on the religious orders
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+ did not coincide with those of his father, did not become a disciple
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+ of the great hermit-sheikh, so the latter had to point out to him that
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+ the rules of the order forbade his remaining any longer in the monastic
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+ institution. He left the place accordingly, and joined a small caravan
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+ which was starting off to the town of Angora, where he eventually
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+ settled. It was a distance of four days' journey on camel-back. This
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+ town was the centre of learning at that time, and there is there a
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+ well-known shrine of a saint, whose name is Haji Beiram. Many thousands
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+ of pilgrims visit his mausoleum every year. My grandfather did not know
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+ anyone in the town, and had no means of supporting himself. He went to
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+ the shrine, and after making a prayer at the graveside of the saint,
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+ he became absorbed in contemplation and eventually slumbered. In his
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+ dream he saw the saint, who asked him his name, and also whether he
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+ could read. The answer to the second question was unsatisfactory, and
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+ thereupon the saint gave him a lesson. On waking up my grandfather
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+ went out and saw several students entering the adjacent _madrasseh_
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+ or theological school. He followed them, and in the _madrasseh_ he
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+ entered into conversation with one of the newly-made lecturers. In
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+ these old-fashioned centres of learning the reputation of a lecturer
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+ depends in great measure on the number of students who attend his
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+ lectures. The lecturer took my grandfather, who was then little more
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+ than a boy, into his class, and settled him in a room along with his
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+ few other pupils. He studied in this _madrasseh_ very many years, and
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+ ultimately became himself a professor of theology, philosophy, and the
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+ temporal law of the Moslems. He made his fame largely by delivering
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+ addresses in different mosques on the commentaries of the Koran, which
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+ attracted large audiences. Many learned men, engaged in kindred studies
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+ throughout Asiatic Turkey, used to apply to him for the solution of
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+ difficult points. The representative of the sovereign in this town used
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+ to pay him visits of respect, but he himself never in his life crossed
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+ the threshold of a government office.
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+
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+ During the reign of Sultan Mahmud II., who ruled from 1808 till 1839,
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+ there took place an imperial wedding at Constantinople to which persons
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+ of distinction in all classes of society throughout the country were
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+ invited. The chief physician of the Sultan (whose grandson is at
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+ present attached as councillor to the Ottoman Embassy in London), who
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+ had been a pupil of my grandfather's, noticed that his name was not
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+ on the list, and strongly recommended his sovereign to invite him. A
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+ courier set out for Asia Minor at once, and brought my grandfather to
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+ the capital. A great banquet was given in the palace in honour of the
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+ event to all the religious dignitaries and principal _Ulema_, that
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+ is to say, the learned hierarchy of the realm. Mahmud II. devised a
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+ curious plan for testing the fortitude and strength of character of
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+ these pious people. During the banquet servants brought in bottles
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+ filled with a red-coloured liquid. Several guards with drawn swords
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+ in their hands followed the attendants, and stood in the entrance.
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+ The bewildered guests naturally did not know what to make of it, and
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+ awaited events in anxious silence. Then, to their consternation, it
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+ was solemnly announced that the liquid in the bottles was wine. Wine!
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+ an abominable intoxicant, of which it is strictly forbidden to the
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+ faithful to touch even a single drop! The pernicious fluid, which has
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+ received from the Prophet himself the name of the "mother of evils"!
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+ (I must explain, by the way, that Mahmud wished to remodel his empire.
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+ After getting rid of those formidable opponents, the Janissaries, he
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+ adopted not only some of the European methods of administration, but
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+ also some of the Western customs and modes of life, and among other
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+ things he ordered his officials and army to wear costumes and uniforms
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+ made after the European style. This policy had already occasioned
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+ disquietude and suspicion in the pious heads under turbans in Asia.)
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+ When the wine was brought before that religiously sober assembly, an
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+ announcement was made that "as the Sultan ruled on European soil he
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+ wished to bring his country more into harmony with the Franks (all the
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+ people of Western Europe are so called), and any unwillingness on the
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+ part of his subjects would possibly hasten the decay of his empire.
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+ It was, moreover, the desire of the sovereign that narrow-minded
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+ superstition and the dislike of new things, even though they were
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+ borrowed from the Franks, should disappear." The announcement was
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+ concluded by the warning that those guests who should refuse to
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+ drink wine would be regarded as rebellious against the will of their
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+ sovereign. Face to face with this somewhat startling alternative,
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+ the guests became pale of countenance and mute of tongue, for, be it
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+ remembered, he who gave this order was a real autocrat, who had even
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+ exterminated the awe-inspiring Janissaries. However, my grandfather
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+ sprang up from his seat and said, "could not our sovereign find any
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+ other virtues among the Franks worth imitating?" He pointed out,
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+ moreover, that the law against drinking wine, the ordinance of the
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+ faith, was given to them by an authority superior even to that of his
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+ Majesty. He then started to go out, and while he was forcing his way
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+ through the servants and guards, Sultan Mahmud, who was watching this
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+ comedy literally from behind the scenes, suddenly stepped in smiling,
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+ and, in order to dispel the fear of the white-bearded, green-turbaned
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+ gentlemen, he said he simply meant to test the fortitude and character
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+ of the people who were to guide his subjects in the paths of religion
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+ and rectitude.
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+
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+ The Sultan later granted an audience to my grandfather, and asked him
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+ to give lessons in the Arabic language to the imperial princes (among
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+ whom was Abdul Mejid, who was Sultan during the Crimean campaign),
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+ and urged him to settle in Constantinople, promising that he would
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+ eventually make him Sheikh-ul-Islam, that is, the head of the religious
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+ magistrates and learned hierarchy. But my grandfather prayed the
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+ sovereign to pardon him for not accepting this honour, saying that
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+ it was his earnest desire to pass his remaining days of life in
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+ retirement and study. He only requested one boon--that he might be
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+ granted the vacant headship of the madrasseh or college in which he had
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+ studied for so many years, and with this, the enjoyment of the lands
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+ devised to it by the Crown.
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+
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+ When my grandfather had returned to his own town, Sultan Mahmud, who
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+ understood and appreciated his quiet contentment, wrote out with
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+ his own hand a saying of the Prophet, had it illuminated, and sent
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+ it to him as a present Roughly translated it runs as follows:--"The
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+ Lord loveth the man of learning who is pious, contented, modest and
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+ retiring." Subsequently, too, he granted my grandfather's request,
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+ and, as an additional clause to the endowment, he made a provision
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+ that these lands should be inherited as real estate by his posterity,
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+ provided that they should, after attaining the age of twenty years,
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+ qualify themselves by an examination before the proper authorities
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+ on those subjects in which he was himself so well versed. The royal
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+ firmans, with the imperial signature on them, beautifully written on
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+ the finest vellum, are still in the possession of our family. These
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+ lands came down to me and to my brothers, but, in spite of all
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+ provisions to the contrary, they were confiscated during the reign
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+ of the present Sultan, a reign which has been so conspicuous for the
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+ suppression of the civil rights and the oppression of the person of the
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+ individual.
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+
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+ We sued the Government to get our property back, and spent all our
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+ money in different courts over lawsuits which lasted fifteen years,
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+ but we could not have expected to succeed, for, as a Turkish poet
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+ has written,--
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+
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+ When the judge is the defendant and the witnesses
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+ are bought,
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+ How can you look for justice from the interested court?
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+
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+ When my grandfather died at the age of eighty-two my own father
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+ inherited the endowed estate; he was not so learned and able as his
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+ father. His only brother, having entered into the Government service,
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+ forfeited his share. My father suffered from an excess of charity,
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+ and in helping others he expended the greater portion of the revenue
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+ of his own estate as well as a part of my mother's private income.
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+ His charitable extravagance became at length so inordinate that he
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+ could not even dine without inviting every day many guests, no matter
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+ whether their position was humble or the reverse. When he died, killed
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+ by the murderous attack of a drunken Government official, he left us
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+ practically nothing but the endowed lands, which he could not have
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+ sold, and these lands, as I pointed out before, were taken over by the
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+ Government of the present Sultan. We were relieved from want by the
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+ fact that the bulk of my mother's property remained intact Fortunately
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+ my father had not been able to squander it.
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+
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+ I was nine years old when the drunken official attacked him, and
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+ so caused his death, which happened thus:--One evening a few women
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+ visitors came to call on my mother. As it is our custom in the East
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+ to keep our women strictly secluded, my father had to retire before
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+ these veiled visitors entered. He asked me to come out with him to
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+ spend the evening with some neighbouring friends, and there we saw the
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+ intoxicated man. My father had a very great abhorrence of drunkenness
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+ and drunkards, and he could not bear to be in the same room with the
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+ man, who was violently drunk and shouting and singing. A quarrel arose
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+ between them. The man attacked my father, and caught him by his long
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+ white beard. My father pushed the assailant back, and in doing so
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+ accidentally put his thumb into the drunkard's mouth, with the result
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+ that he was badly bitten. Although Asia Minor was the cradle of some
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+ of the ancient civilisations, it has not profited from the facilities
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+ afforded to mankind by modern discoveries. There was no surgeon in our
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+ town properly qualified by scientific training, and so my father's
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+ thumb lacked proper treatment.
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+
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+ The only medical men were, as a rule, barbers, who added to their
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+ proper profession that of letting blood for their customers when it was
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+ considered necessary. Bleeding of course used to be in favour in Europe
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+ generally, and it is still largely practised in the East. There are a
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+ great many people in my native country who think that a periodical loss
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+ of blood purifies the system, and have themselves bled accordingly. The
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+ early part of the summer is a favourite time for the operation, before
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+ the season for eating fresh fruit arrives. Blood is let either by a
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+ lancet, or else by means of leeches which are applied to the arms and
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+ legs. The men who were charged with my father's treatment were an old
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+ barber and a professional blood-letter. They used all their choicest
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+ ointments, making my father's thumb worse every day. They used to
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+ criticise each other's skill in surgery. The professional blood-letter
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+ told us that he was once an army surgeon, and it was his boast that
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+ during the Crimean War he had cut off the arms and legs of dozens of
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+ wounded soldiers. He doubtless facilitated the departure of these
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+ unfortunates to the place whither he ultimately sent my father. In
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+ spite of his experiences, however, he did not amputate my parent's arm,
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+ which might have prevented the gangrene which proved fatal. My mother's
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+ efforts to obtain the condemnation of the drunken official, as the
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+ murderer of her husband, failed. He was only sentenced to a few months
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+ of imprisonment, and to pay us an indemnity of about five hundred
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+ pounds.
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+
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+ Perhaps I shall be pardoned for a slight digression here. I laid
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+ some emphasis on the backward condition of the art of surgery in my
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+ native town, but I do not mean thereby that Turkey has been altogether
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+ behindhand in the art of medicine. In some particulars she has even led
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+ the way. For instance, she may claim the discovery of inoculation as
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+ a defence against smallpox, and it is worth while recalling the fact
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+ that Lady Mary Wortley Montagu introduced the treatment into England
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+ from Turkey many years before Jenner made his first experiment. As Lady
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+ Mary saw it, inoculation was performed with lymph taken from human
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+ beings, but according to the _Tarikhi Jevdet_ (vol. ii., p. 341, press
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+ mark Turk. 9, British Museum Library), inoculation was also performed
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+ in a manner suggestive of calf-lymph. A Turkoman of the pastoral
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+ tribes in Asia Minor was paying a visit to Constantinople, and he saw
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+ the children being inoculated with other children's lymph. He said
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+ that in his own country the lymph was taken from the fingers of those
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+ who milked the cows. The book, moreover, states that Lady Mary heard
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+ of the Turkoman's statement, though she does not mention this in her
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+ letter.[1]
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+
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+ The Circassians and some of the tribes of Caucasus are said to have
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+ been acquainted with the uses of inoculation in olden days. They were
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+ chiefly slave-dealers, and they had to take great care of their young
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+ girl-captives, more especially as regarded any sort of disfigurement
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+ which would destroy their good looks, and consequently their value.
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+ Of the early history of the sickness little is known, but it is a
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+ well-established fact that the symptoms were first clearly diagnosed
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+ by the ancient Arab physician, Rhazes, whose name is well known to
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+ Orientalists and students of medical history. His book is entitled
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+ _Kitab-ul-Jederee Vel-Hassabeh_, the translation of which is _Treatise
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+ of Smallpox and Measles_. This work was translated into English from a
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+ Latin version by T. Stark early in the eighteenth century.
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+
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+ * * * * *
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+
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+ The business-like European manner of investing money is not known
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+ among our people. Those who do not know what to do with their spare
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+ money, and who fear it may be stolen, or kindly taken charge of by
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+ the officials of the paternal Sultan, hide their cash by burying it
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+ in corners of their houses or fields. But we did not hide the five
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+ hundred pounds belonging to my mother. Someone suggested to us that we
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+ should buy mohair goats, of which the hair, cut every spring, would
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+ yield us an annual income. This was a little after the Russo-Turkish
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+ War, and in the consequent depression of trade even the silky-haired,
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+ valuable Angora goat was to be cheaply bought We purchased three
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+ hundred of these animals. But misfortunes never come alone. In a
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+ year's time a disease broke out among the greater part of the animals
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+ in our province, and almost all our goats died. My mother, in her
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+ simple faith, attributed this to kismet, and consoled herself and us
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+ accordingly.
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+
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+ My mother is a woman of tact and great natural intelligence, but
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+ owing to the backward condition of women in the East, due to their
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+ surroundings, her intelligence has not had the benefit of culture.
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+ She is, of course, a fatalist, and she believes all she is told by
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+ her religious teachers, who are not very learned themselves. She is
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+ not ignorant; on the contrary, she was in her time the most well-read
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+ woman of our town. Indeed, so far was she in advance of the other
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+ ladies, that they used to visit her for the purpose of hearing her
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+ read aloud from the books of sacred legends and hymns which are their
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+ principal literature. She cannot write at all. This perhaps requires
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+ some explanation. Formerly girls in Turkey were not allowed to learn
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+ the mystery of caligraphy. We have had some excellent poetesses in
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+ days gone by, but none of them could write--they dictated their
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+ inspirations. The common explanation given of this traditional
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+ prohibition--for it is a custom rather than a rule--was that if girls
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+ once learned writing they might have indulged in talismanic pastimes,
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+ and eventually have become witches. As a matter of fact, the real
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+ reason was quite different There was a fear, perhaps not ill-founded,
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+ that having once learned to write they might hasten to make use of
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+ the accomplishment by composing love-letters to young men with whom
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+ they could not otherwise communicate, for the strict seclusion of
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+ females cuts off all intercourse between young people of opposite
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+ sexes almost as soon as they have ceased to be infants. This absurd,
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+ in fact harmful, prohibition has of late, and for some time past, been
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+ losing its force. But it was still strictly observed in my mother's
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+ younger days, and so she was not allowed to learn to write. In spite,
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+ however, of her incomplete education, she kept us happy, and by her
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+ inborn tact preserved the appearance of our social standing. All
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+ members of my mother's family have a practical business-like instinct,
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+ a quality which is so conspicuously lacking in those Turks who have no
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+ strain of foreign blood. I am convinced that there is some European
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+ blood in the veins of my mother's ancestors. She belongs to a family
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+ of soldiers who for generations were charged by the Ottoman Sultans
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+ with the defence of the provinces and the frontiers of Bosnia and
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+ Herzegovina In those days the Turks used to make slaves of their
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+ captives in war, just as their enemies used to carry Turks into
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+ permanent captivity when invading their territory. The antecedents of
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+ the people so enslaved can be traced even now in Hungary and Austria
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+ by their Turkish names. But the captives of the Turks, as a rule, had
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+ to adopt Turkish names, and so the presence of European blood can only
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+ be determined in Turkey by the personal appearance and characteristics
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+ of the descendants of the captives. My mother's soldier-ancestors
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+ doubtless intermarried with European captives. I before disclaimed all
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+ pretensions or desire to pass myself off as a descendant of a European
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+ race when I was describing the Asiatic origin of my forefathers. I am
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+ not, nevertheless, contradicting myself here; for when the pedigree of
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+ a person is being considered with us, it is only his ancestry on the
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+ father's side that counts.
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+
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+ My mother passes a most retired life in her town and summer houses. In
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+ town there is a market-place situated a few minutes' distance from our
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+ house, which she has never seen in her whole life. She went, however,
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+ to Mecca on a pilgrimage some five years ago.
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+ 3930 words in file
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+ 1329 distinct words
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+ Metadata
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