statsample 1.4.1 → 1.4.2

data/test/test_wilcoxonsignedrank.rb

@@ -1,67 +1,64 @@
-require(File.expand_path(File.dirname(__FILE__)+'/helpers_tests.rb'))
+require(File.expand_path(File.dirname(__FILE__) + '/helpers_tests.rb'))
 
-class StatsampleUMannWhitneyTestCase < MiniTest::Unit::TestCase
+class StatsampleUMannWhitneyTestCase < Minitest::Test
   include Statsample::Test
   context Statsample::Test::WilcoxonSignedRank do
-	context "Example 1" do
-		setup do
-		  @v1=[110,122,125,120,140,124,123,137,135,145].to_scale
-		  @v2=[125,115,130,140,140,115,140,125,140,135].to_scale
-		  @u=Statsample::Test::WilcoxonSignedRank.new(@v1,@v2)
-		end
-		should "have same result using class or Test#u_mannwhitney" do 
-		  assert_equal(Statsample::Test.wilcoxon_signed_rank(@v1,@v2).w, @u.w) 
-		end
-		should "have correct W values" do
-		  assert_equal(9,@u.w)
-		end
-		should "have correct nr values" do
-			assert_equal(9,@u.nr)
-		end
-		should "have correct value for z" do
-		  assert_in_delta(0.503,@u.z,0.001)
-		end
-		should "have correct value for probability_z" do
-		  assert_in_delta(0.614,@u.probability_z,0.001)
-		end
-		should "have correct value for probability_exact" do
-		  assert_in_delta(0.652,@u.probability_exact,0.001)
-		end    
-		should "have summary" do
-		  assert(@u.summary!="")
-		end 
-	  end
-	  
-	  context "Example 2" do
-		setup do
-		  @v2=[78,24,64,45,64,52,30,50,64,50,78,22,84,40,90,72].to_scale
-		  @v1=[78,24,62,48,68,56,25,44,56,40,68,36,68,20,58,32].to_scale
-		  @u=Statsample::Test::WilcoxonSignedRank.new(@v1,@v2)
-		end
-		should "have same result using class or Test#u_mannwhitney" do 
-		  assert_equal(Statsample::Test.wilcoxon_signed_rank(@v1,@v2).w, @u.w) 
-		end
-		should "have correct W values" do
-		  assert_equal(67,@u.w)
-		end
-		should "have correct nr values" do
-			assert_equal(14,@u.nr)
-		end
-		should "have correct value for z" do
-		  assert_in_delta(2.087,@u.z,0.001)
-		end
-		should "have correct value for probability_z" do
-		  assert_in_delta(0.036,@u.probability_z,0.001)
-		end
-		should "have correct value for probability_exact" do
-		  assert_in_delta(0.036,@u.probability_exact,0.001)
-		end    
-		should "have summary" do
-		  assert(@u.summary!="")
-		end 
-	  end
-	
-	
-	end
-	  
+    context 'Example 1' do
+      setup do
+        @v1 = [110, 122, 125, 120, 140, 124, 123, 137, 135, 145].to_scale
+        @v2 = [125, 115, 130, 140, 140, 115, 140, 125, 140, 135].to_scale
+        @u = Statsample::Test::WilcoxonSignedRank.new(@v1, @v2)
+      end
+      should 'have same result using class or Test#u_mannwhitney' do
+        assert_equal(Statsample::Test.wilcoxon_signed_rank(@v1, @v2).w, @u.w)
+      end
+      should 'have correct W values' do
+        assert_equal(9, @u.w)
+      end
+      should 'have correct nr values' do
+        assert_equal(9, @u.nr)
+      end
+      should 'have correct value for z' do
+        assert_in_delta(0.503, @u.z, 0.001)
+      end
+      should 'have correct value for probability_z' do
+        assert_in_delta(0.614, @u.probability_z, 0.001)
+      end
+      should 'have correct value for probability_exact' do
+        assert_in_delta(0.652, @u.probability_exact, 0.001)
+      end
+      should 'have summary' do
+        assert(@u.summary != '')
+      end
+    end
+
+    context 'Example 2' do
+      setup do
+        @v2 = [78, 24, 64, 45, 64, 52, 30, 50, 64, 50, 78, 22, 84, 40, 90, 72].to_scale
+        @v1 = [78, 24, 62, 48, 68, 56, 25, 44, 56, 40, 68, 36, 68, 20, 58, 32].to_scale
+        @u = Statsample::Test::WilcoxonSignedRank.new(@v1, @v2)
+      end
+      should 'have same result using class or Test#u_mannwhitney' do
+        assert_equal(Statsample::Test.wilcoxon_signed_rank(@v1, @v2).w, @u.w)
+      end
+      should 'have correct W values' do
+        assert_equal(67, @u.w)
+      end
+      should 'have correct nr values' do
+        assert_equal(14, @u.nr)
+      end
+      should 'have correct value for z' do
+        assert_in_delta(2.087, @u.z, 0.001)
+      end
+      should 'have correct value for probability_z' do
+        assert_in_delta(0.036, @u.probability_z, 0.001)
+      end
+      should 'have correct value for probability_exact' do
+        assert_in_delta(0.036, @u.probability_exact, 0.001)
+      end
+      should 'have summary' do
+        assert(@u.summary != '')
+      end
+    end
+  end
 end

data/test/test_xls.rb

@@ -1,52 +1,52 @@
-require(File.expand_path(File.dirname(__FILE__)+'/helpers_tests.rb'))
-class StatsampleExcelTestCase < MiniTest::Unit::TestCase
-  context "Excel reader" do
-    setup do 
-      @ds=Statsample::Excel.read(File.dirname(__FILE__)+"/fixtures/test_xls.xls")
-    end
-    should "set the number of cases" do
-      assert_equal(6,@ds.cases)
-    end
-    should "set correct field names" do 
-      assert_equal(%w{id name age city a1},@ds.fields)
-    end
-    should "set a dataset equal to expected" do 
-      id=[1,2,3,4,5,6].to_vector(:scale)
-      name=["Alex","Claude","Peter","Franz","George","Fernand"].to_vector(:nominal)
-      age=[20,23,25,nil,5.5,nil].to_vector(:scale)
-      city=["New York","London","London","Paris","Tome",nil].to_vector(:nominal)
-      a1=["a,b","b,c","a",nil,"a,b,c",nil].to_vector(:nominal)
-      ds_exp=Statsample::Dataset.new({'id'=>id,'name'=>name,'age'=>age,'city'=>city,'a1'=>a1}, %w{id name age city a1})
+require(File.expand_path(File.dirname(__FILE__) + '/helpers_tests.rb'))
+class StatsampleExcelTestCase < Minitest::Test
+  context 'Excel reader' do
+    setup do
+      @ds = Statsample::Excel.read(File.dirname(__FILE__) + '/fixtures/test_xls.xls')
+    end
+    should 'set the number of cases' do
+      assert_equal(6, @ds.cases)
+    end
+    should 'set correct field names' do
+      assert_equal(%w(id name age city a1), @ds.fields)
+    end
+    should 'set a dataset equal to expected' do
+      id = [1, 2, 3, 4, 5, 6].to_vector(:scale)
+      name = %w(Alex Claude Peter Franz George Fernand).to_vector(:nominal)
+      age = [20, 23, 25, nil, 5.5, nil].to_vector(:scale)
+      city = ['New York', 'London', 'London', 'Paris', 'Tome', nil].to_vector(:nominal)
+      a1 = ['a,b', 'b,c', 'a', nil, 'a,b,c', nil].to_vector(:nominal)
+      ds_exp = Statsample::Dataset.new({ 'id' => id, 'name' => name, 'age' => age, 'city' => city, 'a1' => a1 }, %w(id name age city a1))
       ds_exp.fields.each{|f|
-        assert_equal(ds_exp[f],@ds[f])
+        assert_equal(ds_exp[f], @ds[f])
       }
-      assert_equal(ds_exp,@ds)
+      assert_equal(ds_exp, @ds)
     end
-    should "set to nil empty cells" do 
-      assert_equal(nil,@ds['age'][5])
+    should 'set to nil empty cells' do
+      assert_equal(nil, @ds['age'][5])
     end
   end
-  context "Excel writer" do
-    setup do 
-      a=100.times.map{rand(100)}.to_scale
-      b=(["b"]*100).to_vector
-      @ds={'b'=>b, 'a'=>a}.to_dataset(%w{b a})
-      tempfile=Tempfile.new("test_write.xls")
-      Statsample::Excel.write(@ds,tempfile.path)
-      @ds2=Statsample::Excel.read(tempfile.path)
-    end
-    should "return same fields as original" do
-      assert_equal(@ds.fields ,@ds2.fields)
-    end
-    should "return same number of cases as original" do
+  context 'Excel writer' do
+    setup do
+      a = 100.times.map { rand(100) }.to_scale
+      b = (['b'] * 100).to_vector
+      @ds = { 'b' => b, 'a' => a }.to_dataset(%w(b a))
+      tempfile = Tempfile.new('test_write.xls')
+      Statsample::Excel.write(@ds, tempfile.path)
+      @ds2 = Statsample::Excel.read(tempfile.path)
+    end
+    should 'return same fields as original' do
+      assert_equal(@ds.fields, @ds2.fields)
+    end
+    should 'return same number of cases as original' do
       assert_equal(@ds.cases, @ds2.cases)
     end
-    should "return same cases as original" do
-      i=0
+    should 'return same cases as original' do
+      i = 0
       @ds2.each_array do |row|
-        assert_equal(@ds.case_as_array(i),row)
-        i+=1
-      end    
+        assert_equal(@ds.case_as_array(i), row)
+        i += 1
+      end
     end
   end
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: statsample
 version: !ruby/object:Gem::Version
-  version: 1.4.1
+  version: 1.4.2
 platform: ruby
 authors:
 - Claudio Bustos
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2015-03-26 00:00:00.000000000 Z
+date: 2015-04-07 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: spreadsheet
@@ -412,6 +412,7 @@ files:
 - test/fixtures/correlation_matrix.rb
 - test/fixtures/hartman_23.matrix
 - test/fixtures/repeated_fields.csv
+- test/fixtures/scientific_notation.csv
 - test/fixtures/stock_data.csv
 - test/fixtures/test_csv.csv
 - test/fixtures/test_xls.xls
@@ -457,7 +458,6 @@ files:
 - test/test_vector.rb
 - test/test_wilcoxonsignedrank.rb
 - test/test_xls.rb
-- web/Rakefile
 homepage: https://github.com/sciruby/statsample
 licenses: []
 metadata: {}
@@ -490,8 +490,58 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.2.2
+rubygems_version: 2.4.5
 signing_key: 
 specification_version: 4
 summary: A suite for basic and advanced statistics on Ruby
-test_files: []
+test_files:
+- test/fixtures/bank2.dat
+- test/fixtures/correlation_matrix.rb
+- test/fixtures/hartman_23.matrix
+- test/fixtures/repeated_fields.csv
+- test/fixtures/scientific_notation.csv
+- test/fixtures/stock_data.csv
+- test/fixtures/test_csv.csv
+- test/fixtures/test_xls.xls
+- test/fixtures/tetmat_matrix.txt
+- test/fixtures/tetmat_test.txt
+- test/helpers_tests.rb
+- test/test_analysis.rb
+- test/test_anova_contrast.rb
+- test/test_anovaoneway.rb
+- test/test_anovatwoway.rb
+- test/test_anovatwowaywithdataset.rb
+- test/test_anovawithvectors.rb
+- test/test_awesome_print_bug.rb
+- test/test_bartlettsphericity.rb
+- test/test_bivariate.rb
+- test/test_codification.rb
+- test/test_crosstab.rb
+- test/test_csv.rb
+- test/test_dataset.rb
+- test/test_dominance_analysis.rb
+- test/test_factor.rb
+- test/test_factor_map.rb
+- test/test_factor_pa.rb
+- test/test_ggobi.rb
+- test/test_gsl.rb
+- test/test_histogram.rb
+- test/test_matrix.rb
+- test/test_multiset.rb
+- test/test_regression.rb
+- test/test_reliability.rb
+- test/test_reliability_icc.rb
+- test/test_reliability_skillscale.rb
+- test/test_resample.rb
+- test/test_rserve_extension.rb
+- test/test_srs.rb
+- test/test_statistics.rb
+- test/test_stest.rb
+- test/test_stratified.rb
+- test/test_test_f.rb
+- test/test_test_kolmogorovsmirnov.rb
+- test/test_test_t.rb
+- test/test_umannwhitney.rb
+- test/test_vector.rb
+- test/test_wilcoxonsignedrank.rb
+- test/test_xls.rb

data/web/Rakefile

@@ -1,39 +0,0 @@
-# -*- ruby -*-
-require 'rake'
-require 'fileutils'
-directory "examples"
-
-def get_base(f)
-  f.sub(File.dirname(__FILE__)+"/../examples/","").gsub("/","_").gsub(".rb","")
-end
-
-
-EXAMPLES=Dir.glob(File.dirname(__FILE__)+"/../examples/**/*.rb").map {|v|     [v, get_base(v)]
-}.find_all{|v| !v[0].include?"_data"}
-
-EXAMPLES_BASE=EXAMPLES.map {|v| v[1]}
-
-
-desc "Build all html, rtf and pdf files"
-task :build_site do
-  ruby "build_site.rb"
-end
-
-
-task :clean do
-  Dir.glob(File.dirname(__FILE__)+"/examples/*.pdf").each do |t|
-    FileUtils.rm t
-  end
-  Dir.glob(File.dirname(__FILE__)+"/examples/*.html").each do |t|
-    FileUtils.rm t
-  end
-  Dir.glob(File.dirname(__FILE__)+"/examples/*.rtf").each do |t|
-    FileUtils.rm t
-  end
-  Dir.glob(File.dirname(__FILE__)+"/examples/images/*.*").each do |t|
-    FileUtils.rm t
-  end
-end
-
-
-load 'upload_task.rb' if File.exists? "upload_task.rb"