statsample-timeseries 0.0.3 → 0.3.0
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- checksums.yaml +7 -0
- data/.gitignore +19 -0
- data/.travis.yml +13 -10
- data/Gemfile +2 -21
- data/History.md +4 -0
- data/LICENSE.txt +1 -1
- data/README.md +62 -0
- data/Rakefile +12 -17
- data/lib/statsample-timeseries.rb +3 -13
- data/lib/statsample-timeseries/arima.rb +72 -74
- data/lib/statsample-timeseries/arima/kalman.rb +20 -40
- data/lib/statsample-timeseries/arima/likelihood.rb +3 -4
- data/lib/statsample-timeseries/daru_monkeys.rb +78 -0
- data/lib/statsample-timeseries/timeseries/pacf.rb +47 -38
- data/lib/statsample-timeseries/utility.rb +105 -133
- data/lib/statsample-timeseries/version.rb +5 -0
- data/statsample-timeseries.gemspec +31 -0
- data/test/helper.rb +6 -29
- data/test/test_acf.rb +41 -0
- data/test/test_arima_ks.rb +28 -12
- data/test/test_arima_simulators.rb +59 -42
- data/test/test_matrix.rb +1 -1
- data/test/test_pacf.rb +7 -2
- data/test/test_wald.rb +7 -3
- metadata +81 -132
- data/README.rdoc +0 -72
- data/VERSION +0 -1
- data/bin/bio-statsample-timeseries +0 -74
- data/features/acf.feature +0 -31
- data/features/pacf.feature +0 -42
- data/features/step_definitions/bio-statsample-timeseries_steps.rb +0 -0
- data/features/step_definitions/step_definitions.rb +0 -37
- data/features/step_definitions/step_definitions_acf.rb +0 -8
- data/features/support/env.rb +0 -15
- data/lib/statsample-timeseries/timeseries.rb +0 -291
- data/test/test_tseries.rb +0 -103
data/test/test_pacf.rb
CHANGED
@@ -1,13 +1,18 @@
|
|
1
1
|
require(File.expand_path(File.dirname(__FILE__)+'/helper.rb'))
|
2
|
-
class StatsampleTimeSeriesPacfTestCase < MiniTest::
|
2
|
+
class StatsampleTimeSeriesPacfTestCase < MiniTest::Test
|
3
3
|
context(Statsample::TimeSeries) do
|
4
4
|
include Statsample::TimeSeries
|
5
5
|
setup do
|
6
|
-
|
6
|
+
Daru.lazy_update = true
|
7
|
+
@ts = Daru::Vector.new((1..20).map { |x| x * 10 })
|
7
8
|
#setting up a proc to get a closure for pacf calling with variable lags and methods
|
8
9
|
@pacf_proc =->(k, method) { @ts.pacf(k, method) }
|
9
10
|
end
|
10
11
|
|
12
|
+
teardown do
|
13
|
+
Daru.lazy_update = false
|
14
|
+
end
|
15
|
+
|
11
16
|
should "return correct correct pacf size for lags = 5" do
|
12
17
|
assert_equal @pacf_proc.call(5, 'yw').size, 6
|
13
18
|
assert_equal @pacf_proc.call(5, 'mle').size, 6
|
data/test/test_wald.rb
CHANGED
@@ -1,17 +1,21 @@
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|
1
1
|
require(File.expand_path(File.dirname(__FILE__)+'/helper.rb'))
|
2
2
|
|
3
|
-
class StatsampleWaldTest < MiniTest::
|
3
|
+
class StatsampleWaldTest < MiniTest::Test
|
4
4
|
# Wald test is useful to test a series of n acf with Chi-square
|
5
5
|
# degree of freedom. It is extremely useful to test fit the fit of
|
6
6
|
# an ARIMA model to test the residuals.
|
7
7
|
|
8
|
-
include Statsample::TimeSeries
|
9
8
|
include Statsample::Shorthand
|
10
9
|
include Distribution
|
11
10
|
|
12
11
|
def setup
|
13
12
|
#create time series to evaluate later
|
14
|
-
|
13
|
+
Daru.lazy_update = true
|
14
|
+
@wald = Daru::Vector.new(100.times.map { rand(100) })
|
15
|
+
end
|
16
|
+
|
17
|
+
def teardown
|
18
|
+
Daru.lazy_update = false
|
15
19
|
end
|
16
20
|
|
17
21
|
def sum_of_squares_of_acf_series(lags)
|
metadata
CHANGED
@@ -1,257 +1,206 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
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name: statsample-timeseries
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3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.0
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-
prerelease:
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4
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+
version: 0.3.0
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5
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platform: ruby
|
7
6
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authors:
|
8
7
|
- Ankur Goel
|
9
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-
-
|
8
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+
- Sameer Deshmukh
|
10
9
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autorequire:
|
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10
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bindir: bin
|
12
11
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cert_chain: []
|
13
|
-
date:
|
12
|
+
date: 2015-08-19 00:00:00.000000000 Z
|
14
13
|
dependencies:
|
15
14
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- !ruby/object:Gem::Dependency
|
16
15
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name: statsample
|
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requirement: !ruby/object:Gem::Requirement
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-
none: false
|
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requirements:
|
20
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-
- -
|
18
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+
- - "~>"
|
21
19
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- !ruby/object:Gem::Version
|
22
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-
version:
|
20
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+
version: '2.0'
|
23
21
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type: :runtime
|
24
22
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prerelease: false
|
25
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version_requirements: !ruby/object:Gem::Requirement
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-
none: false
|
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24
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requirements:
|
28
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-
- -
|
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+
- - "~>"
|
29
26
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- !ruby/object:Gem::Version
|
30
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-
version:
|
27
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+
version: '2.0'
|
31
28
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- !ruby/object:Gem::Dependency
|
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-
name:
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29
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+
name: daru
|
33
30
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requirement: !ruby/object:Gem::Requirement
|
34
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-
none: false
|
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31
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requirements:
|
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-
- -
|
32
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+
- - "~>"
|
37
33
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- !ruby/object:Gem::Version
|
38
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-
version:
|
34
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+
version: '0.1'
|
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35
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type: :runtime
|
40
36
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prerelease: false
|
41
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version_requirements: !ruby/object:Gem::Requirement
|
42
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-
none: false
|
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38
|
requirements:
|
44
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-
- -
|
39
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+
- - "~>"
|
45
40
|
- !ruby/object:Gem::Version
|
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-
version:
|
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+
version: '0.1'
|
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- !ruby/object:Gem::Dependency
|
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-
name:
|
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-
requirement: !ruby/object:Gem::Requirement
|
50
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-
none: false
|
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-
requirements:
|
52
|
-
- - ! '>='
|
53
|
-
- !ruby/object:Gem::Version
|
54
|
-
version: '0'
|
55
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-
type: :development
|
56
|
-
prerelease: false
|
57
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-
version_requirements: !ruby/object:Gem::Requirement
|
58
|
-
none: false
|
59
|
-
requirements:
|
60
|
-
- - ! '>='
|
61
|
-
- !ruby/object:Gem::Version
|
62
|
-
version: '0'
|
63
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-
- !ruby/object:Gem::Dependency
|
64
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-
name: rdoc
|
65
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-
requirement: !ruby/object:Gem::Requirement
|
66
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-
none: false
|
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-
requirements:
|
68
|
-
- - ~>
|
69
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-
- !ruby/object:Gem::Version
|
70
|
-
version: '3.12'
|
71
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-
type: :development
|
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-
prerelease: false
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-
version_requirements: !ruby/object:Gem::Requirement
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-
none: false
|
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-
requirements:
|
76
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-
- - ~>
|
77
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-
- !ruby/object:Gem::Version
|
78
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-
version: '3.12'
|
79
|
-
- !ruby/object:Gem::Dependency
|
80
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-
name: minitest
|
43
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+
name: bundler
|
81
44
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requirement: !ruby/object:Gem::Requirement
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-
none: false
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45
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requirements:
|
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-
- - ~>
|
46
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+
- - "~>"
|
85
47
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- !ruby/object:Gem::Version
|
86
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-
version:
|
48
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+
version: '1.10'
|
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type: :development
|
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prerelease: false
|
89
51
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version_requirements: !ruby/object:Gem::Requirement
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90
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-
none: false
|
91
52
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requirements:
|
92
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-
- - ~>
|
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+
- - "~>"
|
93
54
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- !ruby/object:Gem::Version
|
94
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-
version:
|
55
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+
version: '1.10'
|
95
56
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- !ruby/object:Gem::Dependency
|
96
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-
name:
|
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+
name: rb-gsl
|
97
58
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requirement: !ruby/object:Gem::Requirement
|
98
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-
none: false
|
99
59
|
requirements:
|
100
|
-
- -
|
60
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+
- - "~>"
|
101
61
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- !ruby/object:Gem::Version
|
102
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-
version: '
|
62
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+
version: '1.16'
|
103
63
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type: :development
|
104
64
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prerelease: false
|
105
65
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version_requirements: !ruby/object:Gem::Requirement
|
106
|
-
none: false
|
107
66
|
requirements:
|
108
|
-
- -
|
67
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+
- - "~>"
|
109
68
|
- !ruby/object:Gem::Version
|
110
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-
version: '
|
69
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+
version: '1.16'
|
111
70
|
- !ruby/object:Gem::Dependency
|
112
|
-
name:
|
71
|
+
name: rake
|
113
72
|
requirement: !ruby/object:Gem::Requirement
|
114
|
-
none: false
|
115
73
|
requirements:
|
116
|
-
- - ~>
|
74
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+
- - "~>"
|
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75
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- !ruby/object:Gem::Version
|
118
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-
version:
|
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+
version: '10.4'
|
119
77
|
type: :development
|
120
78
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prerelease: false
|
121
79
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version_requirements: !ruby/object:Gem::Requirement
|
122
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-
none: false
|
123
80
|
requirements:
|
124
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-
- - ~>
|
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+
- - "~>"
|
125
82
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- !ruby/object:Gem::Version
|
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-
version:
|
83
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+
version: '10.4'
|
127
84
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- !ruby/object:Gem::Dependency
|
128
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-
name:
|
85
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+
name: minitest
|
129
86
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requirement: !ruby/object:Gem::Requirement
|
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-
none: false
|
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87
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requirements:
|
132
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-
- - ~>
|
88
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+
- - "~>"
|
133
89
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- !ruby/object:Gem::Version
|
134
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-
version:
|
90
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+
version: '5.7'
|
135
91
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type: :development
|
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92
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prerelease: false
|
137
93
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version_requirements: !ruby/object:Gem::Requirement
|
138
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-
none: false
|
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94
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requirements:
|
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-
- - ~>
|
95
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+
- - "~>"
|
141
96
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- !ruby/object:Gem::Version
|
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-
version:
|
97
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+
version: '5.7'
|
143
98
|
- !ruby/object:Gem::Dependency
|
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-
name:
|
99
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+
name: mocha
|
145
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requirement: !ruby/object:Gem::Requirement
|
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-
none: false
|
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|
requirements:
|
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-
- -
|
102
|
+
- - "~>"
|
149
103
|
- !ruby/object:Gem::Version
|
150
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-
version: 1.
|
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+
version: '1.1'
|
151
105
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type: :development
|
152
106
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prerelease: false
|
153
107
|
version_requirements: !ruby/object:Gem::Requirement
|
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|
-
none: false
|
155
108
|
requirements:
|
156
|
-
- -
|
109
|
+
- - "~>"
|
157
110
|
- !ruby/object:Gem::Version
|
158
|
-
version: 1.
|
111
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+
version: '1.1'
|
159
112
|
- !ruby/object:Gem::Dependency
|
160
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-
name:
|
113
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+
name: shoulda
|
161
114
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requirement: !ruby/object:Gem::Requirement
|
162
|
-
none: false
|
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115
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requirements:
|
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-
- - ~>
|
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+
- - "~>"
|
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117
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- !ruby/object:Gem::Version
|
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version: '3.
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+
version: '3.5'
|
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type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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none: false
|
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122
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requirements:
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-
- - ~>
|
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+
- - "~>"
|
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- !ruby/object:Gem::Version
|
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version: '3.
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version: '3.5'
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- !ruby/object:Gem::Dependency
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name:
|
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name: awesome_print
|
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requirement: !ruby/object:Gem::Requirement
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none: false
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requirements:
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- -
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- - ">="
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- !ruby/object:Gem::Version
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version: 0
|
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version: '0'
|
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133
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type: :development
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134
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prerelease: false
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135
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version_requirements: !ruby/object:Gem::Requirement
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none: false
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136
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requirements:
|
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-
- -
|
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- - ">="
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138
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- !ruby/object:Gem::Version
|
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-
version: 0
|
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-
description:
|
192
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-
|
193
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-
|
194
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-
executables:
|
195
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-
- bio-statsample-timeseries
|
139
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+
version: '0'
|
140
|
+
description: Various functions for time series analysis.
|
141
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+
email:
|
142
|
+
- sameer.deshmukh93@gmail.com
|
143
|
+
executables: []
|
196
144
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extensions: []
|
197
|
-
extra_rdoc_files:
|
198
|
-
- LICENSE.txt
|
199
|
-
- README.rdoc
|
145
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+
extra_rdoc_files: []
|
200
146
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files:
|
201
|
-
- .document
|
202
|
-
- .
|
147
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+
- ".document"
|
148
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+
- ".gitignore"
|
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+
- ".travis.yml"
|
203
150
|
- Gemfile
|
151
|
+
- History.md
|
204
152
|
- LICENSE.txt
|
205
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-
- README.
|
153
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+
- README.md
|
206
154
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- Rakefile
|
207
|
-
- VERSION
|
208
|
-
- bin/bio-statsample-timeseries
|
209
|
-
- features/acf.feature
|
210
|
-
- features/pacf.feature
|
211
|
-
- features/step_definitions/bio-statsample-timeseries_steps.rb
|
212
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-
- features/step_definitions/step_definitions.rb
|
213
|
-
- features/step_definitions/step_definitions_acf.rb
|
214
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-
- features/support/env.rb
|
215
155
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- lib/statsample-timeseries.rb
|
216
156
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- lib/statsample-timeseries/arima.rb
|
217
157
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- lib/statsample-timeseries/arima/kalman.rb
|
218
158
|
- lib/statsample-timeseries/arima/likelihood.rb
|
219
|
-
- lib/statsample-timeseries/
|
159
|
+
- lib/statsample-timeseries/daru_monkeys.rb
|
220
160
|
- lib/statsample-timeseries/timeseries/pacf.rb
|
221
161
|
- lib/statsample-timeseries/utility.rb
|
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|
+
- lib/statsample-timeseries/version.rb
|
163
|
+
- statsample-timeseries.gemspec
|
222
164
|
- test/fixtures/stock_data.csv
|
223
165
|
- test/helper.rb
|
166
|
+
- test/test_acf.rb
|
224
167
|
- test/test_arima_ks.rb
|
225
168
|
- test/test_arima_simulators.rb
|
226
169
|
- test/test_matrix.rb
|
227
170
|
- test/test_pacf.rb
|
228
|
-
- test/test_tseries.rb
|
229
171
|
- test/test_wald.rb
|
230
|
-
homepage:
|
231
|
-
licenses:
|
172
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+
homepage: ''
|
173
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licenses:
|
174
|
+
- BSD-2
|
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metadata: {}
|
232
176
|
post_install_message:
|
233
177
|
rdoc_options: []
|
234
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|
require_paths:
|
235
179
|
- lib
|
236
180
|
required_ruby_version: !ruby/object:Gem::Requirement
|
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|
-
none: false
|
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181
|
requirements:
|
239
|
-
- -
|
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|
+
- - ">="
|
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183
|
- !ruby/object:Gem::Version
|
241
184
|
version: '0'
|
242
|
-
segments:
|
243
|
-
- 0
|
244
|
-
hash: 903118733
|
245
185
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
246
|
-
none: false
|
247
186
|
requirements:
|
248
|
-
- -
|
187
|
+
- - ">="
|
249
188
|
- !ruby/object:Gem::Version
|
250
189
|
version: '0'
|
251
190
|
requirements: []
|
252
191
|
rubyforge_project:
|
253
|
-
rubygems_version:
|
192
|
+
rubygems_version: 2.4.6
|
254
193
|
signing_key:
|
255
|
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specification_version:
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summary:
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specification_version: 4
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summary: statsample-timeseries is a statsample extension which includes many functions
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for time series analysis.
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test_files:
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- test/fixtures/stock_data.csv
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- test/helper.rb
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- test/test_acf.rb
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- test/test_arima_ks.rb
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- test/test_arima_simulators.rb
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- test/test_matrix.rb
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- test/test_pacf.rb
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- test/test_wald.rb
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has_rdoc:
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data/README.rdoc
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= statsample-timeseries
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{<img
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src="https://secure.travis-ci.org/AnkurGel/statsample-timeseries.png"
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/>}[http://travis-ci.org/#!/AnkurGel/statsample-timeseries]
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Statsample-Timeseries is an extension to [Statsample](https://github.com/clbustos/statsample), a suite of advance statistics in Ruby.
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* {sciruby.com}[http://sciruby.com]
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* {Google+}[https://plus.google.com/109304769076178160953/posts]
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* {Ankur Goel}[http://ankurgoel.com]
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* {Statsample}[https://github.com/SciRuby/statsample]
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== Description
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Statsample-Timeseries is extension of Statsample, and incorporates helpful timeseries functions, estimations and modules such as:
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* ACF
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* PACF
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* ARIMA
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* KalmanFilter
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* LogLikelihood
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* Autocovariances
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* Moving Averages
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Statsample-Timeseries was created by Ankur Goel as part of Google's Summer of Code 2013. It is the part of {SciRuby}[http://sciruby.com]
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== Dependency
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Please install [`rb-gsl`](http://rb-gsl.rubyforge.org/) which is a Ruby wrapper over GNU Scientific Library. It enables us to use various minimization techniques during estimations.
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== Installation
|
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gem install statsample-timeseries
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== Usage
|
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To use the library
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require 'statsample-timeseries'
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You can also go through the blog-posts on {my blog}[http://ankurgoel.com] for descriptive explanation and examples.
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== Documentation
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The API doc is {online}[http://rubygems.org/gems/statsample-timeseries]. For more code examples see also the test files in the source tree.
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== Contributing
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* Fork the project.
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* Create your feature branch
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* Add/Modify code.
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* Write equivalent documentation and **tests**.
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* Run `rake test` to verify that all test case passes.
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* Push your branch.
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* Pull request. :)
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== Project home page
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Information on the source tree, documentation, issues and how to contribute, see
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{http://github.com/AnkurGel/statsample-timeseries}[git@github.com:AnkurGel/statsample-timeseries.git]
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== Copyright
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Copyright (c) 2013 Ankur Goel. See LICENSE.txt for further details.
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