spectrum_hash 0.1.0 → 0.2.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +14 -12
- data/lib/spectrum_hash/splash.rb +7 -3
- data/lib/spectrum_hash/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 7e722e675d098633fbd9c722ae9228f05cdec21d
|
4
|
+
data.tar.gz: bb25509f784e1009bb0b997e5cb1ae74aa0431f0
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 0aa5ef383767f2525672da797e641fbc9cf3c9a5a3cd77c14983b0c67548aa2b35fed4bc9c91852bccbda4412035a88da6a166f17093ba8366bee17a68b6d446
|
7
|
+
data.tar.gz: e8afb17a438faa364a8f8333a97b6e5793d6fc1df46c58b35cbbfab8ccb8fa25435221cba86cd11ca8bd3cb37339af02ee70139937cfc74a3a635060e1834d59
|
data/README.md
CHANGED
@@ -38,7 +38,7 @@ spectrum = [
|
|
38
38
|
]
|
39
39
|
|
40
40
|
SpectrumHash.from_peaks(spectrum).splash
|
41
|
-
# => "splash10-
|
41
|
+
# => "splash10-0006-9100000000-b0cf38693934211e4e35"
|
42
42
|
```
|
43
43
|
|
44
44
|
Create a splash from a tab delimited list of peaks and strings.
|
@@ -54,30 +54,34 @@ spectrum = <<-TXT
|
|
54
54
|
TXT
|
55
55
|
|
56
56
|
SpectrumHash.from_string(spectrum).splash
|
57
|
-
# => "splash10-
|
57
|
+
# => "splash10-0006-9100000000-b0cf38693934211e4e35"
|
58
58
|
```
|
59
59
|
|
60
|
-
There are a
|
61
|
-
splash
|
60
|
+
There are a few convenience methods to get the different components of
|
61
|
+
the splash
|
62
62
|
```ruby
|
63
63
|
|
64
|
-
splash = SpectrumHash.from_splash_string "splash10-
|
64
|
+
splash = SpectrumHash.from_splash_string "splash10-0006-9100000000-b0cf38693934211e4e35"
|
65
65
|
|
66
66
|
# print the version number for the splash
|
67
67
|
splash.version
|
68
68
|
# => "1"
|
69
69
|
|
70
|
-
#
|
70
|
+
# get the full version block
|
71
71
|
splash.version_block
|
72
72
|
# => "splash10"
|
73
73
|
|
74
|
-
#
|
74
|
+
# get the top ten block
|
75
|
+
splash.top_ten_block
|
76
|
+
# => "0006"
|
77
|
+
|
78
|
+
# get the histogram block
|
75
79
|
splash.histogram_block
|
76
|
-
# => "
|
80
|
+
# => "9100000000"
|
77
81
|
|
78
|
-
#
|
82
|
+
# get the hash block
|
79
83
|
splash.hash_block
|
80
|
-
# => "
|
84
|
+
# => "b0cf38693934211e4e35"
|
81
85
|
|
82
86
|
# get the histogram as a list of integers (handy for comparisons)
|
83
87
|
splash.histogram_list
|
@@ -87,8 +91,6 @@ splash.histogram_list
|
|
87
91
|
|
88
92
|
Get the manhattan distance between the histogram blocks of two splashes
|
89
93
|
```ruby
|
90
|
-
splash1 = SpectrumHash.from_splash_string "splash10-z400010000-d64778f5782df78f3910"
|
91
|
-
splash2 = SpectrumHash.from_splash_string "splash10-z40h010000-d349672ea211ef542549"
|
92
94
|
splash1.distance_to splash2
|
93
95
|
# => 17
|
94
96
|
```
|
data/lib/spectrum_hash/splash.rb
CHANGED
@@ -59,16 +59,20 @@ module SpectrumHash
|
|
59
59
|
split_splash[0]
|
60
60
|
end
|
61
61
|
|
62
|
-
def
|
62
|
+
def top_ten_block
|
63
63
|
split_splash[1]
|
64
64
|
end
|
65
65
|
|
66
|
-
def
|
66
|
+
def histogram_block
|
67
67
|
split_splash[2]
|
68
68
|
end
|
69
69
|
|
70
|
+
def hash_block
|
71
|
+
split_splash[3]
|
72
|
+
end
|
73
|
+
|
70
74
|
def histogram_list
|
71
|
-
@histogram_list ||= histogram_block.chars.map{|v| v.to_i
|
75
|
+
@histogram_list ||= histogram_block.chars.map{|v| v.to_i }
|
72
76
|
end
|
73
77
|
|
74
78
|
def to_s
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: spectrum_hash
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.1
|
4
|
+
version: 0.2.1
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Michael Wilson
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2016-05-12 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: httparty
|