sooth 1.0.3 → 2.0.0
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/CHANGELOG.md +3 -8
- data/Gemfile +1 -1
- data/Gemfile.lock +61 -34
- data/README.md +7 -4
- data/VERSION +1 -1
- data/ext/sooth_native/extconf.rb +1 -1
- data/ext/sooth_native/native.c +142 -113
- data/ext/sooth_native/sooth_context.h +1 -3
- data/ext/sooth_native/sooth_predictor.c +82 -62
- data/ext/sooth_native/sooth_predictor.h +8 -6
- data/ext/sooth_native/sooth_statistic.h +1 -3
- data/sooth.gemspec +7 -8
- data/spec/memory_spec.rb +24 -24
- data/spec/predictor_spec.rb +153 -115
- metadata +5 -6
data/spec/predictor_spec.rb
CHANGED
@@ -3,176 +3,214 @@ require 'tempfile'
|
|
3
3
|
require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
|
4
4
|
|
5
5
|
describe Sooth::Predictor do
|
6
|
-
let(:
|
6
|
+
let(:error_event) { 42 }
|
7
|
+
let(:predictor) { Sooth::Predictor.new(error_event) }
|
7
8
|
|
8
9
|
describe "#observe" do
|
9
|
-
it "increments
|
10
|
-
expect(predictor.observe(
|
11
|
-
expect(predictor.observe(
|
12
|
-
expect(predictor.observe(
|
10
|
+
it "increments counts" do
|
11
|
+
expect(predictor.observe(1, 3)).to eq(1)
|
12
|
+
expect(predictor.observe(1, 3)).to eq(2)
|
13
|
+
expect(predictor.observe(1, 3)).to eq(3)
|
13
14
|
end
|
14
15
|
|
15
|
-
it "
|
16
|
-
expect(predictor.observe(
|
17
|
-
expect(predictor.observe(
|
18
|
-
expect(predictor.observe(
|
19
|
-
expect(predictor.observe(
|
20
|
-
expect(predictor.observe(
|
21
|
-
expect(predictor.observe(
|
16
|
+
it "sorts and finds contexts" do
|
17
|
+
expect(predictor.observe(2, 3)).to eq(1)
|
18
|
+
expect(predictor.observe(1, 2)).to eq(1)
|
19
|
+
expect(predictor.observe(3, 1)).to eq(1)
|
20
|
+
expect(predictor.observe(1, 2)).to eq(2)
|
21
|
+
expect(predictor.observe(2, 3)).to eq(2)
|
22
|
+
expect(predictor.observe(3, 1)).to eq(2)
|
22
23
|
end
|
23
24
|
end
|
24
25
|
|
25
26
|
describe "#count" do
|
26
|
-
it "returns
|
27
|
-
expect(predictor.count(
|
27
|
+
it "returns zero for an unobserved context" do
|
28
|
+
expect(predictor.count(1)).to eq(0)
|
28
29
|
end
|
29
30
|
|
30
|
-
it "returns the
|
31
|
-
predictor.observe(
|
32
|
-
predictor.observe(
|
33
|
-
predictor.observe(
|
34
|
-
predictor.observe(
|
35
|
-
predictor.observe(
|
36
|
-
predictor.observe(
|
37
|
-
predictor.observe(
|
38
|
-
expect(predictor.count(
|
31
|
+
it "returns the number of observations" do
|
32
|
+
predictor.observe(1, 2)
|
33
|
+
predictor.observe(1, 1)
|
34
|
+
predictor.observe(1, 4)
|
35
|
+
predictor.observe(1, 3)
|
36
|
+
predictor.observe(1, 0)
|
37
|
+
predictor.observe(1, 1)
|
38
|
+
predictor.observe(1, 4)
|
39
|
+
expect(predictor.count(1)).to eq(7)
|
39
40
|
end
|
40
41
|
end
|
41
42
|
|
43
|
+
describe "#size" do
|
44
|
+
it "returns zero for an unobserved context" do
|
45
|
+
expect(predictor.size(1)).to eq(0)
|
46
|
+
end
|
47
|
+
|
48
|
+
it "returns the number of distinct events" do
|
49
|
+
predictor.observe(1, 2)
|
50
|
+
predictor.observe(1, 1)
|
51
|
+
predictor.observe(1, 4)
|
52
|
+
predictor.observe(1, 3)
|
53
|
+
predictor.observe(1, 0)
|
54
|
+
predictor.observe(1, 1)
|
55
|
+
predictor.observe(1, 4)
|
56
|
+
expect(predictor.size(1)).to eq(5)
|
57
|
+
end
|
58
|
+
|
59
|
+
end
|
60
|
+
|
42
61
|
describe "#select" do
|
43
|
-
it "returns the error
|
44
|
-
expect(predictor.select(
|
45
|
-
end
|
46
|
-
|
47
|
-
it "returns the correct
|
48
|
-
predictor.observe(
|
49
|
-
predictor.observe(
|
50
|
-
predictor.observe(
|
51
|
-
predictor.observe(
|
52
|
-
expect(predictor.select(
|
53
|
-
expect(predictor.select(
|
54
|
-
expect(predictor.select(
|
55
|
-
expect(predictor.select(
|
56
|
-
end
|
57
|
-
|
58
|
-
it "returns the error
|
59
|
-
predictor.observe(
|
60
|
-
predictor.observe(
|
61
|
-
predictor.observe(
|
62
|
-
expect(predictor.select(
|
63
|
-
expect(predictor.select(
|
64
|
-
end
|
65
|
-
|
66
|
-
it "selects the correct
|
67
|
-
predictor.observe(
|
68
|
-
predictor.observe(
|
69
|
-
predictor.observe(
|
70
|
-
predictor.observe(
|
71
|
-
predictor.observe(
|
72
|
-
predictor.observe(
|
73
|
-
predictor.observe(
|
74
|
-
predictor.observe(
|
75
|
-
predictor.observe(
|
76
|
-
expect(predictor.select(
|
77
|
-
expect(predictor.select(
|
78
|
-
expect(predictor.select(
|
79
|
-
expect(predictor.select(
|
80
|
-
expect(predictor.select(
|
81
|
-
expect(predictor.select(
|
82
|
-
expect(predictor.select(
|
83
|
-
expect(predictor.select(
|
84
|
-
expect(predictor.select(
|
85
|
-
expect(predictor.select(
|
86
|
-
expect(predictor.select(
|
87
|
-
expect(predictor.select(
|
88
|
-
expect(predictor.select(
|
89
|
-
expect(predictor.select(
|
90
|
-
expect(predictor.select(
|
62
|
+
it "returns the error event for an unobserved context" do
|
63
|
+
expect(predictor.select(1, 1)).to eq(error_event)
|
64
|
+
end
|
65
|
+
|
66
|
+
it "returns the correct event for an observed context" do
|
67
|
+
predictor.observe(1, 4)
|
68
|
+
predictor.observe(1, 3)
|
69
|
+
predictor.observe(1, 4)
|
70
|
+
predictor.observe(1, 5)
|
71
|
+
expect(predictor.select(1, 1)).to eq(3)
|
72
|
+
expect(predictor.select(1, 2)).to eq(4)
|
73
|
+
expect(predictor.select(1, 3)).to eq(4)
|
74
|
+
expect(predictor.select(1, 4)).to eq(5)
|
75
|
+
end
|
76
|
+
|
77
|
+
it "returns the error event for a limit that is out of range" do
|
78
|
+
predictor.observe(1, 4)
|
79
|
+
predictor.observe(1, 3)
|
80
|
+
predictor.observe(1, 5)
|
81
|
+
expect(predictor.select(1, 0)).to eq(error_event)
|
82
|
+
expect(predictor.select(1, 4)).to eq(error_event)
|
83
|
+
end
|
84
|
+
|
85
|
+
it "selects the correct event with many contexts" do
|
86
|
+
predictor.observe(2, 4)
|
87
|
+
predictor.observe(1, 5)
|
88
|
+
predictor.observe(3, 6)
|
89
|
+
predictor.observe(1, 7)
|
90
|
+
predictor.observe(2, 8)
|
91
|
+
predictor.observe(3, 9)
|
92
|
+
predictor.observe(1, 1)
|
93
|
+
predictor.observe(2, 2)
|
94
|
+
predictor.observe(3, 3)
|
95
|
+
expect(predictor.select(2, 0)).to eq(error_event)
|
96
|
+
expect(predictor.select(2, 1)).to eq(2)
|
97
|
+
expect(predictor.select(2, 2)).to eq(4)
|
98
|
+
expect(predictor.select(2, 3)).to eq(8)
|
99
|
+
expect(predictor.select(2, 4)).to eq(error_event)
|
100
|
+
expect(predictor.select(1, 0)).to eq(error_event)
|
101
|
+
expect(predictor.select(1, 1)).to eq(1)
|
102
|
+
expect(predictor.select(1, 2)).to eq(5)
|
103
|
+
expect(predictor.select(1, 3)).to eq(7)
|
104
|
+
expect(predictor.select(1, 4)).to eq(error_event)
|
105
|
+
expect(predictor.select(3, 0)).to eq(error_event)
|
106
|
+
expect(predictor.select(3, 1)).to eq(3)
|
107
|
+
expect(predictor.select(3, 2)).to eq(6)
|
108
|
+
expect(predictor.select(3, 3)).to eq(9)
|
109
|
+
expect(predictor.select(3, 4)).to eq(error_event)
|
91
110
|
end
|
92
111
|
end
|
93
112
|
|
94
113
|
describe "#clear" do
|
95
|
-
|
96
|
-
|
97
|
-
expect(predictor.observe(
|
98
|
-
expect(predictor.observe(
|
99
|
-
expect(predictor.observe([1,2], 3)).to eq(3)
|
114
|
+
it "resets to a blank slate" do
|
115
|
+
expect(predictor.observe(1, 3)).to eq(1)
|
116
|
+
expect(predictor.observe(1, 3)).to eq(2)
|
117
|
+
expect(predictor.observe(1, 3)).to eq(3)
|
100
118
|
predictor.clear
|
101
|
-
expect(predictor.observe(
|
102
|
-
expect(predictor.observe(
|
103
|
-
expect(predictor.observe(
|
119
|
+
expect(predictor.observe(1, 3)).to eq(1)
|
120
|
+
expect(predictor.observe(1, 3)).to eq(2)
|
121
|
+
expect(predictor.observe(1, 3)).to eq(3)
|
104
122
|
end
|
105
|
-
|
106
123
|
end
|
107
124
|
|
108
125
|
describe "#save" do
|
109
|
-
|
110
126
|
it "can save a file and load it back again" do
|
111
127
|
begin
|
112
128
|
file = Tempfile.new('sooth_spec')
|
113
|
-
expect(predictor.observe(
|
114
|
-
expect(predictor.observe(
|
115
|
-
expect(predictor.observe(
|
116
|
-
expect(predictor.observe(
|
129
|
+
expect(predictor.observe(1, 3)).to eq(1)
|
130
|
+
expect(predictor.observe(2, 3)).to eq(1)
|
131
|
+
expect(predictor.observe(1, 3)).to eq(2)
|
132
|
+
expect(predictor.observe(1, 3)).to eq(3)
|
117
133
|
expect { predictor.save(file.path) } .to_not raise_error
|
118
|
-
expect(predictor.count(
|
119
|
-
expect(predictor.count(
|
134
|
+
expect(predictor.count(1)).to eq(3)
|
135
|
+
expect(predictor.count(2)).to eq(1)
|
120
136
|
predictor.clear
|
121
|
-
expect(predictor.count(
|
122
|
-
expect(predictor.count(
|
137
|
+
expect(predictor.count(1)).to eq(0)
|
138
|
+
expect(predictor.count(2)).to eq(0)
|
123
139
|
expect { predictor.load(file.path) }.to_not raise_error
|
124
|
-
expect(predictor.count(
|
125
|
-
expect(predictor.count(
|
126
|
-
expect(predictor.observe(
|
127
|
-
expect(predictor.observe(
|
128
|
-
expect(predictor.observe(
|
129
|
-
expect(predictor.observe(
|
140
|
+
expect(predictor.count(1)).to eq(3)
|
141
|
+
expect(predictor.count(2)).to eq(1)
|
142
|
+
expect(predictor.observe(1, 3)).to eq(4)
|
143
|
+
expect(predictor.observe(1, 1)).to eq(1)
|
144
|
+
expect(predictor.observe(2, 3)).to eq(2)
|
145
|
+
expect(predictor.observe(2, 1)).to eq(1)
|
130
146
|
ensure
|
131
147
|
file.close
|
132
148
|
file.unlink
|
133
149
|
end
|
134
150
|
end
|
151
|
+
end
|
135
152
|
|
153
|
+
describe "#distribution" do
|
154
|
+
it "can iterate over a distribution" do
|
155
|
+
end
|
136
156
|
end
|
137
157
|
|
138
|
-
describe "#
|
158
|
+
describe "#distribution" do
|
159
|
+
it "has no distribution for a new context" do
|
160
|
+
expect(predictor.distribution(1)).to be_nil
|
161
|
+
expect(predictor.count(1)).to eq(0)
|
162
|
+
expect(predictor.uncertainty(1)).to be_nil
|
163
|
+
end
|
164
|
+
|
165
|
+
it "has a correct probability distribution" do
|
166
|
+
predictor.observe(1, 4)
|
167
|
+
predictor.observe(1, 2)
|
168
|
+
predictor.observe(1, 4)
|
169
|
+
predictor.observe(1, 3)
|
170
|
+
dist = Hash[predictor.distribution(1)]
|
171
|
+
expect(dist[1]).to be_nil
|
172
|
+
expect(dist[2]).to eq(0.25)
|
173
|
+
expect(dist[3]).to eq(0.25)
|
174
|
+
expect(dist[4]).to eq(0.5)
|
175
|
+
end
|
176
|
+
end
|
139
177
|
|
178
|
+
describe "#uncertainty" do
|
140
179
|
it "has no uncertainty for a new context" do
|
141
|
-
expect(predictor.uncertainty(
|
142
|
-
expect(predictor.count(
|
143
|
-
expect(predictor.uncertainty(
|
180
|
+
expect(predictor.uncertainty(1)).to be_nil
|
181
|
+
expect(predictor.count(1)).to eq(0)
|
182
|
+
expect(predictor.uncertainty(1)).to be_nil
|
144
183
|
end
|
145
184
|
|
146
185
|
it "has zero uncertainty for a lone context" do
|
147
|
-
predictor.observe(
|
148
|
-
expect(predictor.uncertainty(
|
186
|
+
predictor.observe(1, 3)
|
187
|
+
expect(predictor.uncertainty(1)).to eq(0)
|
149
188
|
end
|
150
189
|
|
151
190
|
it "has maximal uncertainty for a uniform distribution" do
|
152
|
-
(1..256).each { |i| predictor.observe(
|
153
|
-
expect(predictor.uncertainty(
|
191
|
+
(1..256).each { |i| predictor.observe(1, i) }
|
192
|
+
expect(predictor.uncertainty(1)).to eq(8)
|
154
193
|
end
|
155
|
-
|
156
194
|
end
|
157
195
|
|
158
196
|
describe "#surprise" do
|
197
|
+
it "has no surprise for a new context" do
|
198
|
+
expect(predictor.surprise(1, 3)).to be_nil
|
199
|
+
end
|
159
200
|
|
160
|
-
it "has no surprise for a new
|
161
|
-
|
162
|
-
expect(predictor.
|
163
|
-
expect(predictor.surprise([1, 2], 3)).to be_nil
|
201
|
+
it "has no surprise for a new event" do
|
202
|
+
predictor.observe(1, 3)
|
203
|
+
expect(predictor.surprise(1, 4)).to be_nil
|
164
204
|
end
|
165
205
|
|
166
|
-
it "has zero surprise for a lone
|
167
|
-
predictor.observe(
|
168
|
-
expect(predictor.surprise(
|
206
|
+
it "has zero surprise for a lone event" do
|
207
|
+
predictor.observe(1, 3)
|
208
|
+
expect(predictor.surprise(1, 3)).to eq(0)
|
169
209
|
end
|
170
210
|
|
171
211
|
it "has uniform surprise for a uniform distribution" do
|
172
|
-
(1..256).each { |i| predictor.observe(
|
173
|
-
expect(predictor.surprise(
|
212
|
+
(1..256).each { |i| predictor.observe(1, i) }
|
213
|
+
expect(predictor.surprise(1, 3)).to eq(8)
|
174
214
|
end
|
175
|
-
|
176
215
|
end
|
177
|
-
|
178
216
|
end
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: sooth
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version:
|
4
|
+
version: 2.0.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Jason Hutchens
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2016-04-06 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: rspec
|
@@ -100,14 +100,14 @@ dependencies:
|
|
100
100
|
requirements:
|
101
101
|
- - "~>"
|
102
102
|
- !ruby/object:Gem::Version
|
103
|
-
version: '
|
103
|
+
version: '8.2'
|
104
104
|
type: :development
|
105
105
|
prerelease: false
|
106
106
|
version_requirements: !ruby/object:Gem::Requirement
|
107
107
|
requirements:
|
108
108
|
- - "~>"
|
109
109
|
- !ruby/object:Gem::Version
|
110
|
-
version: '
|
110
|
+
version: '8.2'
|
111
111
|
- !ruby/object:Gem::Dependency
|
112
112
|
name: rake-compiler
|
113
113
|
requirement: !ruby/object:Gem::Requirement
|
@@ -142,7 +142,6 @@ executables: []
|
|
142
142
|
extensions:
|
143
143
|
- ext/sooth_native/extconf.rb
|
144
144
|
extra_rdoc_files:
|
145
|
-
- CHANGELOG.md
|
146
145
|
- README.md
|
147
146
|
files:
|
148
147
|
- CHANGELOG.md
|
@@ -183,7 +182,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
183
182
|
version: '0'
|
184
183
|
requirements: []
|
185
184
|
rubyforge_project:
|
186
|
-
rubygems_version: 2.
|
185
|
+
rubygems_version: 2.5.1
|
187
186
|
signing_key:
|
188
187
|
specification_version: 4
|
189
188
|
summary: Sooth is a simple stochastic predictive model.
|