simple_inline_text_annotation 1.1.1 → 2.1.0

checksums.yaml

@@ -1,7 +1,7 @@
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+  data.tar.gz: 3ad0707815cbad9040153cee41c6e54761f32364bec3c9780f23d7a119c2e2b5
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+  data.tar.gz: 45d9bc60245dc1f91b72f77110ce04b4b00010c674b1b2be61c46f3499683cf392451279cc126e6d24518a14dedfe4919f23615f6a963c8d0267a77096f73d6d

data/.rubocop.yml

@@ -1,5 +1,6 @@
 AllCops:
-  TargetRubyVersion: 3.1
+  TargetRubyVersion: 3.4.4
+  NewCops: enable
 
 Style/StringLiterals:
   EnforcedStyle: double_quotes
@@ -13,3 +14,6 @@ Style/Documentation:
 Metrics/BlockLength:
   Exclude:
     - 'spec/**/*'
+
+Gemspec/RequireMFA:
+  Enabled: false

data/lib/simple_inline_text_annotation/denotation.rb

@@ -15,11 +15,11 @@ class SimpleInlineTextAnnotation
     end
 
     def span
-      { begin: @begin_pos, end: @end_pos }
+      { "begin" => @begin_pos, "end" => @end_pos }
     end
 
     def to_h
-      { id: @id, span: span, obj: @obj }.compact
+      { "id" => @id, "span" => span, "obj" => @obj }.compact
     end
 
     def nested_within?(other)

data/lib/simple_inline_text_annotation/entity_type_collection.rb

@@ -20,12 +20,12 @@ class SimpleInlineTextAnnotation
     # to_config returns a Array of hashes of each entity type.
     # Example:
     #   [
-    #     {id: "https://example.com/Person", label: "Person"},
-    #     {id: "https://example.com/Organization", label: "Organization"}
+    #     {"id" => "https://example.com/Person", "label" => "Person"},
+    #     {"id" => "https://example.com/Organization", "label" => "Organization"}
     #   ]
     def to_config
       entity_types.map do |label, id|
-        { id: id, label: label }
+        { "id" => id, "label" => label }
       end
     end
 

data/lib/simple_inline_text_annotation/generator_error.rb

@@ -3,7 +3,7 @@
 class SimpleInlineTextAnnotation
   class GeneratorError < StandardError
     def initialize(msg = nil)
-      super(msg)
+      super
     end
   end
 end

data/lib/simple_inline_text_annotation/parser.rb

@@ -2,6 +2,7 @@
 
 require_relative "entity_type_collection"
 require_relative "denotation"
+require_relative "relation_without_denotation_error"
 
 class SimpleInlineTextAnnotation
   class Parser
@@ -21,12 +22,10 @@ class SimpleInlineTextAnnotation
 
       process_annotations(full_text)
 
-      SimpleInlineTextAnnotation.new(
-        full_text,
-        @denotations,
-        @relations,
-        @entity_type_collection
-      )
+      SimpleInlineTextAnnotation.new full_text,
+                                     @denotations,
+                                     @relations,
+                                     @entity_type_collection
     end
 
     private
@@ -58,6 +57,7 @@ class SimpleInlineTextAnnotation
       return match.end(0) unless process_annotation(match[2], begin_pos, end_pos)
 
       full_text[match.begin(0)...match.end(0)] = target_text
+
       end_pos
     end
 
@@ -89,7 +89,7 @@ class SimpleInlineTextAnnotation
       subj, label, pred, obj2 = annotations
       obj = get_obj_for(label)
       @denotations << Denotation.new(begin_pos, end_pos, obj, subj)
-      @relations << { pred: pred, subj: subj, obj: obj2 }
+      @relations << { "pred" => pred, "subj" => subj, "obj" => obj2 }
     end
   end
 end

data/lib/simple_inline_text_annotation/relation_without_denotation_error.rb

@@ -0,0 +1,5 @@
+# frozen_string_literal: true
+
+class SimpleInlineTextAnnotation
+  class RelationWithoutDenotationError < StandardError; end
+end

data/lib/simple_inline_text_annotation/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 class SimpleInlineTextAnnotation
-  VERSION = "1.1.1"
+  VERSION = "2.1.0"
 end

data/lib/simple_inline_text_annotation.rb

@@ -25,6 +25,7 @@ class SimpleInlineTextAnnotation
     @denotations = denotations
     @relations = relations
     @entity_type_collection = entity_type_collection
+    check_denotations_and_relations
   end
 
   def self.parse(source)
@@ -38,10 +39,10 @@ class SimpleInlineTextAnnotation
 
   def to_h
     {
-      text: format_text(@text),
-      denotations: @denotations.map(&:to_h),
-      relations: @relations.empty? ? nil : @relations,
-      config: config
+      "text" => format_text(@text),
+      "denotations" => @denotations.map(&:to_h),
+      "relations" => @relations.empty? ? nil : @relations,
+      "config" => config
     }.compact
   end
 
@@ -68,6 +69,21 @@ class SimpleInlineTextAnnotation
   def config
     return nil unless @entity_type_collection.any?
 
-    { "entity types": @entity_type_collection.to_config }
+    { "entity types" => @entity_type_collection.to_config }
+  end
+
+  def check_denotations_and_relations
+    @relations.each do |relation|
+      unless referable_to?(relation, @denotations)
+        raise SimpleInlineTextAnnotation::RelationWithoutDenotationError,
+              "Relation #{relation.inspect} refers to missing denotation."
+      end
+    end
+  end
+
+  def referable_to?(relation, denotations)
+    denotation_ids = denotations.map(&:id)
+
+    denotation_ids.include?(relation["subj"]) && denotation_ids.include?(relation["obj"])
   end
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: simple_inline_text_annotation
 version: !ruby/object:Gem::Version
-  version: 1.1.1
+  version: 2.1.0
 platform: ruby
 authors:
 - xaiBUh29wX
 autorequire:
 bindir: exe
 cert_chain: []
-date: 2025-05-27 00:00:00.000000000 Z
+date: 2025-08-05 00:00:00.000000000 Z
 dependencies: []
 description: This gem provides inline text annotation functionality, extracted from
   PubAnnotation, with support for denotations, entity types, and nested spans.
@@ -33,6 +33,7 @@ files:
 - lib/simple_inline_text_annotation/generator_error.rb
 - lib/simple_inline_text_annotation/parser.rb
 - lib/simple_inline_text_annotation/relation_validator.rb
+- lib/simple_inline_text_annotation/relation_without_denotation_error.rb
 - lib/simple_inline_text_annotation/version.rb
 - sig/simple_inline_text_annotation.rbs
 homepage: https://github.com/pubannotation/simple_inline_annotation_format
@@ -50,7 +51,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="
     - !ruby/object:Gem::Version
-      version: 3.1.0
+      version: 3.4.4
 required_rubygems_version: !ruby/object:Gem::Requirement
   requirements:
   - - ">="