simple_bioc 0.0.16 → 0.0.17
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/simple_bioc/annotation.rb +1 -1
- data/lib/simple_bioc/bioc_reader.rb +6 -2
- data/lib/simple_bioc/bioc_writer.rb +11 -10
- data/lib/simple_bioc/document.rb +5 -5
- data/lib/simple_bioc/location_adjuster.rb +3 -1
- data/lib/simple_bioc/node.rb +2 -2
- data/lib/simple_bioc/node_base.rb +1 -1
- data/lib/simple_bioc/passage.rb +5 -5
- data/lib/simple_bioc/relation.rb +1 -1
- data/lib/simple_bioc/sentence.rb +3 -3
- data/lib/simple_bioc/version.rb +1 -1
- data/xml/merge/output.xml +974 -974
- data/xml/merge/output_10330397.xml +317 -317
- data/xml/merge/output_10366597.xml +1 -1
- metadata +2 -2
@@ -96,57 +96,57 @@
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</annotation>
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<annotation id="Team286_A14">
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<infon key="type">Gene</infon>
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-
<location offset="
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<location offset="728" length="4"/>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A15">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="779" length="29"/>
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<text>plasma membrane proton-ATPase</text>
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</annotation>
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<annotation id="Team286_A16">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="811" length="5"/>
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<text>Pma1p</text>
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</annotation>
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<annotation id="Team286_A17">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="980" length="5"/>
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<text>Pma1p</text>
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</annotation>
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<annotation id="Team286_A18">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1013" length="17"/>
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<text>lst1Delta mutants</text>
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</annotation>
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<annotation id="Team286_A19">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1112" length="15"/>
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<text>Pma1p transport</text>
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</annotation>
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<annotation id="Team286_A20">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1254" length="18"/>
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<text>COPII coat subunit</text>
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</annotation>
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<annotation id="Team286_A21">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1279" length="5"/>
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<text>Lst1p</text>
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</annotation>
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<annotation id="Team286_A22">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1297" length="6"/>
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<text>Sec24p</text>
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</annotation>
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<annotation id="Team286_A23">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="1345" length="5"/>
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<text>Pma1p</text>
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</annotation>
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<annotation id="TEAM_336_PPI0">
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<infon key="type">PPImention</infon>
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<location offset="608" length="94"/>
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<location offset="608" length="94" original_offset="0"/>
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<text>Like Sec24p, Lst1p is a peripheral ER membrane protein that binds to the COPII subunit Sec23p.</text>
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</annotation>
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</passage>
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@@ -326,12 +326,12 @@
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</annotation>
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<annotation id="TEAM_336_PPI1">
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<infon key="type">PPImention</infon>
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<location offset="3406" length="348"/>
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<location offset="3406" length="348" original_offset="0"/>
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<text>Membrane-associated Sar1p, in turn, recruits the soluble Sec23p/Sec24p and Sec13p/Sec31p complexes (Matsuoka et al., 1998). Sec16p resides on the ER membrane and binds to both the Sec23p/Sec24p and Sec13p/Sec31p complexes, likely organizing their assembly onto the membrane (Espenshade et al., 1995; Gimeno et al., 1996; Shaywitz et al., 1997).</text>
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</annotation>
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<annotation id="TEAM_336_PPI2">
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<infon key="type">PPImention</infon>
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<location offset="3963" length="291"/>
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<location offset="3963" length="291" original_offset="0"/>
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<text>Association of a membrane-bound complex of Sar1p and Sec23p/Sec24p with integral membrane proteins indicates that cargo proteins may laterally partition into the vesicle membrane by virtue of their affinity for the Sec23p/Sec24p protein complex (Aridor et al., 1998; Kuehn et al., 1998).</text>
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</annotation>
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</passage>
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@@ -356,7 +356,7 @@
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</annotation>
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<annotation id="Team286_A60">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5069" length="10"/>
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<text>COPII coat</text>
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</annotation>
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</passage>
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@@ -401,62 +401,62 @@
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</annotation>
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<annotation id="Team286_A68">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5565" length="4"/>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A69">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5719" length="4"/>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A70">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5790" length="4"/>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A71">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5823" length="13"/>
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<text>COPII subunit</text>
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</annotation>
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<annotation id="Team286_A72">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5838" length="6"/>
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<text>Sec24p</text>
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</annotation>
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<annotation id="Team286_A73">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5855" length="5"/>
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<text>Lst1p</text>
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</annotation>
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<annotation id="Team286_A74">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5944" length="6"/>
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<text>Sec23p</text>
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</annotation>
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<annotation id="Team286_A75">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="5956" length="9"/>
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<text>LST1 gene</text>
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</annotation>
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<annotation id="Team286_A76">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="6025" length="17"/>
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<text>lst1Delta mutants</text>
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</annotation>
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<annotation id="Team286_A77">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="6057" length="4"/>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A78">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="6102" length="5"/>
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<text>Pma1p</text>
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</annotation>
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<annotation id="Team286_A79">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="6247" length="5"/>
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<text>Pma1p</text>
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</annotation>
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</passage>
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@@ -711,42 +711,42 @@
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</annotation>
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<annotation id="Team286_A126">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="8576" length="11"/>
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<text>HA epitopes</text>
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</annotation>
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<annotation id="Team286_A127">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="8605" length="7"/>
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<text>pKR17HA</text>
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</annotation>
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<annotation id="Team286_A128">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="8615" length="7"/>
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<text>pKR17HA</text>
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</annotation>
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<annotation id="Team286_A129">
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<infon key="type">Gene</infon>
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<location offset="
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<location offset="8644" length="6"/>
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<text>CKY536</text>
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</annotation>
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<annotation id="Team286_A130">
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<text>CKY535</text>
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</annotation>
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<annotation id="Team286_A131">
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<location offset="
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<text>MATa lst1Delta</text>
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</annotation>
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<text>LEU2 leu2-3, 112 ura3-52</text>
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</annotation>
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<annotation id="Team286_A133">
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<infon key="type">Gene</infon>
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<text>pKR17HA</text>
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</annotation>
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</passage>
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</annotation>
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<annotation id="Team286_A158">
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<text>sec13-1</text>
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</annotation>
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<annotation id="Team286_A159">
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<text>pKR1</text>
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</annotation>
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<annotation id="Team286_A160">
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<text>pRS316</text>
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</annotation>
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<annotation id="Team286_A161">
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<infon key="type">Gene</infon>
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<text>sec13-1</text>
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</annotation>
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</passage>
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</annotation>
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<text>LST1</text>
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</annotation>
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<annotation id="Team286_A214">
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<text>Eco47III</text>
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</annotation>
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<annotation id="Team286_A215">
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<text>MscI</text>
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</annotation>
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<text>pKR28</text>
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</annotation>
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<text>pKR28Delta</text>
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</annotation>
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<text>LEU2 construct</text>
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</annotation>
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<text>pKR28Delta</text>
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</annotation>
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<text>XhoI</text>
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<text>MATa/alpha leu2-3,112/leu2-3</text>
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<text>112</text>
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<text>ura3-52</text>
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|
+
<location offset="12806" length="4"/>
|
1260
1260
|
<text>LEU2</text>
|
1261
1261
|
</annotation>
|
1262
1262
|
<annotation id="Team286_A228">
|
1263
1263
|
<infon key="type">Gene</infon>
|
1264
|
-
<location offset="
|
1264
|
+
<location offset="12952" length="6"/>
|
1265
1265
|
<text>CKY542</text>
|
1266
1266
|
</annotation>
|
1267
1267
|
</passage>
|
@@ -1666,7 +1666,7 @@
|
|
1666
1666
|
</annotation>
|
1667
1667
|
<annotation id="TEAM_336_PPI3">
|
1668
1668
|
<infon key="type">PPImention</infon>
|
1669
|
-
<location offset="21609" length="26"/>
|
1669
|
+
<location offset="21609" length="26" original_offset="0"/>
|
1670
1670
|
<text>Binding of Lst1p to Sec23p</text>
|
1671
1671
|
</annotation>
|
1672
1672
|
</passage>
|
@@ -1766,32 +1766,32 @@
|
|
1766
1766
|
</annotation>
|
1767
1767
|
<annotation id="Team286_A310">
|
1768
1768
|
<infon key="type">Gene</infon>
|
1769
|
-
<location offset="
|
1769
|
+
<location offset="22103" length="6"/>
|
1770
1770
|
<text>CKY473</text>
|
1771
1771
|
</annotation>
|
1772
1772
|
<annotation id="Team286_A311">
|
1773
1773
|
<infon key="type">Gene</infon>
|
1774
|
-
<location offset="
|
1774
|
+
<location offset="22128" length="6"/>
|
1775
1775
|
<text>pRH254</text>
|
1776
1776
|
</annotation>
|
1777
1777
|
<annotation id="Team286_A312">
|
1778
1778
|
<infon key="type">Gene</infon>
|
1779
|
-
<location offset="
|
1779
|
+
<location offset="22136" length="3"/>
|
1780
1780
|
<text>GST</text>
|
1781
1781
|
</annotation>
|
1782
1782
|
<annotation id="Team286_A313">
|
1783
1783
|
<infon key="type">Gene</infon>
|
1784
|
-
<location offset="
|
1784
|
+
<location offset="22140" length="5"/>
|
1785
1785
|
<text>Lst1p</text>
|
1786
1786
|
</annotation>
|
1787
1787
|
<annotation id="Team286_A314">
|
1788
1788
|
<infon key="type">Gene</infon>
|
1789
|
-
<location offset="
|
1789
|
+
<location offset="22179" length="6"/>
|
1790
1790
|
<text>pPE123</text>
|
1791
1791
|
</annotation>
|
1792
1792
|
<annotation id="Team286_A315">
|
1793
1793
|
<infon key="type">Gene</infon>
|
1794
|
-
<location offset="
|
1794
|
+
<location offset="22187" length="6"/>
|
1795
1795
|
<text>Sec23p</text>
|
1796
1796
|
</annotation>
|
1797
1797
|
</passage>
|
@@ -2186,182 +2186,182 @@
|
|
2186
2186
|
</annotation>
|
2187
2187
|
<annotation id="Team286_A384">
|
2188
2188
|
<infon key="type">Gene</infon>
|
2189
|
-
<location offset="
|
2189
|
+
<location offset="27980" length="6"/>
|
2190
2190
|
<text>CKY426</text>
|
2191
2191
|
</annotation>
|
2192
2192
|
<annotation id="Team286_A385">
|
2193
2193
|
<infon key="type">Gene</infon>
|
2194
|
-
<location offset="
|
2194
|
+
<location offset="28202" length="5"/>
|
2195
2195
|
<text>SEC13</text>
|
2196
2196
|
</annotation>
|
2197
2197
|
<annotation id="Team286_A386">
|
2198
2198
|
<infon key="type">Gene</infon>
|
2199
|
-
<location offset="
|
2199
|
+
<location offset="28212" length="4"/>
|
2200
2200
|
<text>LST1</text>
|
2201
2201
|
</annotation>
|
2202
2202
|
<annotation id="Team286_A387">
|
2203
2203
|
<infon key="type">Gene</infon>
|
2204
|
-
<location offset="
|
2204
|
+
<location offset="28280" length="5"/>
|
2205
2205
|
<text>SEC13</text>
|
2206
2206
|
</annotation>
|
2207
2207
|
<annotation id="Team286_A388">
|
2208
2208
|
<infon key="type">Gene</infon>
|
2209
|
-
<location offset="
|
2209
|
+
<location offset="28380" length="7"/>
|
2210
2210
|
<text>sec13-1</text>
|
2211
2211
|
</annotation>
|
2212
2212
|
<annotation id="Team286_A389">
|
2213
2213
|
<infon key="type">Gene</infon>
|
2214
|
-
<location offset="
|
2214
|
+
<location offset="28517" length="6"/>
|
2215
2215
|
<text>p21-31</text>
|
2216
2216
|
</annotation>
|
2217
2217
|
<annotation id="Team286_A390">
|
2218
2218
|
<infon key="type">Gene</infon>
|
2219
|
-
<location offset="
|
2219
|
+
<location offset="28528" length="5"/>
|
2220
2220
|
<text>p77-2</text>
|
2221
2221
|
</annotation>
|
2222
2222
|
<annotation id="Team286_A391">
|
2223
2223
|
<infon key="type">Gene</infon>
|
2224
|
-
<location offset="
|
2224
|
+
<location offset="28611" length="5"/>
|
2225
2225
|
<text>p77-2</text>
|
2226
2226
|
</annotation>
|
2227
2227
|
<annotation id="Team286_A392">
|
2228
2228
|
<infon key="type">Gene</infon>
|
2229
|
-
<location offset="
|
2229
|
+
<location offset="28694" length="4"/>
|
2230
2230
|
<text>XhoI</text>
|
2231
2231
|
</annotation>
|
2232
2232
|
<annotation id="Team286_A393">
|
2233
2233
|
<infon key="type">Gene</infon>
|
2234
|
-
<location offset="
|
2234
|
+
<location offset="28754" length="5"/>
|
2235
2235
|
<text>pKR20</text>
|
2236
2236
|
</annotation>
|
2237
2237
|
<annotation id="Team286_A394">
|
2238
2238
|
<infon key="type">Gene</infon>
|
2239
|
-
<location offset="
|
2239
|
+
<location offset="28791" length="5"/>
|
2240
2240
|
<text>pKR20</text>
|
2241
2241
|
</annotation>
|
2242
2242
|
<annotation id="Team286_A395">
|
2243
2243
|
<infon key="type">Gene</infon>
|
2244
|
-
<location offset="
|
2244
|
+
<location offset="28830" length="4"/>
|
2245
2245
|
<text>HpaI</text>
|
2246
2246
|
</annotation>
|
2247
2247
|
<annotation id="Team286_A396">
|
2248
2248
|
<infon key="type">Gene</infon>
|
2249
|
-
<location offset="
|
2249
|
+
<location offset="28857" length="6"/>
|
2250
2250
|
<text>CUY564</text>
|
2251
2251
|
</annotation>
|
2252
2252
|
<annotation id="Team286_A397">
|
2253
2253
|
<infon key="type">Gene</infon>
|
2254
|
-
<location offset="
|
2254
|
+
<location offset="28865" length="29"/>
|
2255
2255
|
<text>MATalpha ade2 ade3 leu2 ura3</text>
|
2256
2256
|
</annotation>
|
2257
2257
|
<annotation id="Team286_A398">
|
2258
2258
|
<infon key="type">Gene</infon>
|
2259
|
-
<location offset="
|
2259
|
+
<location offset="28937" length="21"/>
|
2260
2260
|
<text>lst1-1 mutant CKY426</text>
|
2261
2261
|
</annotation>
|
2262
2262
|
<annotation id="Team286_A399">
|
2263
2263
|
<infon key="type">Gene</infon>
|
2264
|
-
<location offset="
|
2264
|
+
<location offset="28960" length="4"/>
|
2265
2265
|
<text>MATa</text>
|
2266
2266
|
</annotation>
|
2267
2267
|
<annotation id="Team286_A400">
|
2268
2268
|
<infon key="type">Gene</infon>
|
2269
|
-
<location offset="
|
2269
|
+
<location offset="28965" length="19"/>
|
2270
2270
|
<text>lst1-1 sec13-1 ade2</text>
|
2271
2271
|
</annotation>
|
2272
2272
|
<annotation id="Team286_A401">
|
2273
2273
|
<infon key="type">Gene</infon>
|
2274
|
-
<location offset="
|
2274
|
+
<location offset="28985" length="14"/>
|
2275
2275
|
<text>ade3 leu2 ura3</text>
|
2276
2276
|
</annotation>
|
2277
2277
|
<annotation id="Team286_A402">
|
2278
2278
|
<infon key="type">Gene</infon>
|
2279
|
-
<location offset="
|
2279
|
+
<location offset="29002" length="4"/>
|
2280
2280
|
<text>pKR4</text>
|
2281
2281
|
</annotation>
|
2282
2282
|
<annotation id="Team286_A403">
|
2283
2283
|
<infon key="type">Gene</infon>
|
2284
|
-
<location offset="
|
2284
|
+
<location offset="29060" length="5"/>
|
2285
2285
|
<text>pKR20</text>
|
2286
2286
|
</annotation>
|
2287
2287
|
<annotation id="Team286_A404">
|
2288
2288
|
<infon key="type">Gene</infon>
|
2289
|
-
<location offset="
|
2289
|
+
<location offset="29107" length="10"/>
|
2290
2290
|
<text>LST1 locus</text>
|
2291
2291
|
</annotation>
|
2292
2292
|
<annotation id="Team286_A405">
|
2293
2293
|
<infon key="type">Gene</infon>
|
2294
|
-
<location offset="
|
2294
|
+
<location offset="29176" length="4"/>
|
2295
2295
|
<text>Ura+</text>
|
2296
2296
|
</annotation>
|
2297
2297
|
<annotation id="Team286_A406">
|
2298
2298
|
<infon key="type">Gene</infon>
|
2299
|
-
<location offset="
|
2299
|
+
<location offset="29220" length="3"/>
|
2300
2300
|
<text>Ura</text>
|
2301
2301
|
</annotation>
|
2302
2302
|
<annotation id="Team286_A407">
|
2303
2303
|
<infon key="type">Gene</infon>
|
2304
|
-
<location offset="
|
2304
|
+
<location offset="29233" length="5"/>
|
2305
2305
|
<text>p77-2</text>
|
2306
2306
|
</annotation>
|
2307
2307
|
<annotation id="Team286_A408">
|
2308
2308
|
<infon key="type">Gene</infon>
|
2309
|
-
<location offset="
|
2309
|
+
<location offset="29251" length="9"/>
|
2310
2310
|
<text>LST1 gene</text>
|
2311
2311
|
</annotation>
|
2312
2312
|
<annotation id="Team286_A409">
|
2313
2313
|
<infon key="type">Gene</infon>
|
2314
|
-
<location offset="
|
2314
|
+
<location offset="29301" length="6"/>
|
2315
2315
|
<text>p21-31</text>
|
2316
2316
|
</annotation>
|
2317
2317
|
<annotation id="Team286_A410">
|
2318
2318
|
<infon key="type">Gene</infon>
|
2319
|
-
<location offset="
|
2319
|
+
<location offset="29380" length="5"/>
|
2320
2320
|
<text>EcoRI</text>
|
2321
2321
|
</annotation>
|
2322
2322
|
<annotation id="Team286_A411">
|
2323
2323
|
<infon key="type">Gene</infon>
|
2324
|
-
<location offset="
|
2324
|
+
<location offset="29386" length="7"/>
|
2325
2325
|
<text>HindIII</text>
|
2326
2326
|
</annotation>
|
2327
2327
|
<annotation id="Team286_A412">
|
2328
2328
|
<infon key="type">Gene</infon>
|
2329
|
-
<location offset="
|
2329
|
+
<location offset="29409" length="6"/>
|
2330
2330
|
<text>pRS306</text>
|
2331
2331
|
</annotation>
|
2332
2332
|
<annotation id="Team286_A413">
|
2333
2333
|
<infon key="type">Gene</infon>
|
2334
|
-
<location offset="
|
2334
|
+
<location offset="29427" length="4"/>
|
2335
2335
|
<text>pKR7</text>
|
2336
2336
|
</annotation>
|
2337
2337
|
<annotation id="Team286_A414">
|
2338
2338
|
<infon key="type">Gene</infon>
|
2339
|
-
<location offset="
|
2339
|
+
<location offset="29433" length="4"/>
|
2340
2340
|
<text>pKR7</text>
|
2341
2341
|
</annotation>
|
2342
2342
|
<annotation id="Team286_A415">
|
2343
2343
|
<infon key="type">Gene</infon>
|
2344
|
-
<location offset="
|
2344
|
+
<location offset="29504" length="4"/>
|
2345
2345
|
<text>MscI</text>
|
2346
2346
|
</annotation>
|
2347
2347
|
<annotation id="Team286_A416">
|
2348
2348
|
<infon key="type">Gene</infon>
|
2349
|
-
<location offset="
|
2349
|
+
<location offset="29545" length="6"/>
|
2350
2350
|
<text>lst1-1</text>
|
2351
2351
|
</annotation>
|
2352
2352
|
<annotation id="Team286_A417">
|
2353
2353
|
<infon key="type">Gene</infon>
|
2354
|
-
<location offset="
|
2354
|
+
<location offset="29582" length="4"/>
|
2355
2355
|
<text>pKR7</text>
|
2356
2356
|
</annotation>
|
2357
2357
|
<annotation id="Team286_A418">
|
2358
2358
|
<infon key="type">Gene</infon>
|
2359
|
-
<location offset="
|
2359
|
+
<location offset="29605" length="4"/>
|
2360
2360
|
<text>LST1</text>
|
2361
2361
|
</annotation>
|
2362
2362
|
<annotation id="Team286_A419">
|
2363
2363
|
<infon key="type">Gene</infon>
|
2364
|
-
<location offset="
|
2364
|
+
<location offset="29633" length="4"/>
|
2365
2365
|
<text>pKR7</text>
|
2366
2366
|
</annotation>
|
2367
2367
|
</passage>
|
@@ -2381,32 +2381,32 @@
|
|
2381
2381
|
</annotation>
|
2382
2382
|
<annotation id="Team286_A422">
|
2383
2383
|
<infon key="type">Gene</infon>
|
2384
|
-
<location offset="
|
2384
|
+
<location offset="30103" length="4"/>
|
2385
2385
|
<text>LST1</text>
|
2386
2386
|
</annotation>
|
2387
2387
|
<annotation id="Team286_A423">
|
2388
2388
|
<infon key="type">Gene</infon>
|
2389
|
-
<location offset="
|
2389
|
+
<location offset="30141" length="5"/>
|
2390
2390
|
<text>SEC24</text>
|
2391
2391
|
</annotation>
|
2392
2392
|
<annotation id="Team286_A424">
|
2393
2393
|
<infon key="type">Gene</infon>
|
2394
|
-
<location offset="
|
2394
|
+
<location offset="30148" length="7"/>
|
2395
2395
|
<text>YIL109C</text>
|
2396
2396
|
</annotation>
|
2397
2397
|
<annotation id="Team286_A425">
|
2398
2398
|
<infon key="type">Gene</infon>
|
2399
|
-
<location offset="
|
2399
|
+
<location offset="30269" length="5"/>
|
2400
2400
|
<text>Lst1p</text>
|
2401
2401
|
</annotation>
|
2402
2402
|
<annotation id="Team286_A426">
|
2403
2403
|
<infon key="type">Gene</infon>
|
2404
|
-
<location offset="
|
2404
|
+
<location offset="30315" length="6"/>
|
2405
2405
|
<text>Sec24p</text>
|
2406
2406
|
</annotation>
|
2407
2407
|
<annotation id="Team286_A427">
|
2408
2408
|
<infon key="type">Gene</infon>
|
2409
|
-
<location offset="
|
2409
|
+
<location offset="30343" length="18"/>
|
2410
2410
|
<text>COPII vesicle coat</text>
|
2411
2411
|
</annotation>
|
2412
2412
|
</passage>
|
@@ -2766,87 +2766,87 @@
|
|
2766
2766
|
</annotation>
|
2767
2767
|
<annotation id="Team286_A494">
|
2768
2768
|
<infon key="type">Gene</infon>
|
2769
|
-
<location offset="
|
2769
|
+
<location offset="34579" length="18"/>
|
2770
2770
|
<text>pGAL1-LST1 plasmid</text>
|
2771
2771
|
</annotation>
|
2772
2772
|
<annotation id="Team286_A495">
|
2773
2773
|
<infon key="type">Gene</infon>
|
2774
|
-
<location offset="
|
2774
|
+
<location offset="34599" length="5"/>
|
2775
2775
|
<text>pKR35</text>
|
2776
2776
|
</annotation>
|
2777
2777
|
<annotation id="Team286_A496">
|
2778
2778
|
<infon key="type">Gene</infon>
|
2779
|
-
<location offset="
|
2779
|
+
<location offset="34615" length="10"/>
|
2780
2780
|
<text>SEC24 gene</text>
|
2781
2781
|
</annotation>
|
2782
2782
|
<annotation id="Team286_A497">
|
2783
2783
|
<infon key="type">Gene</infon>
|
2784
|
-
<location offset="
|
2784
|
+
<location offset="34644" length="5"/>
|
2785
2785
|
<text>pKR41</text>
|
2786
2786
|
</annotation>
|
2787
2787
|
<annotation id="Team286_A498">
|
2788
2788
|
<infon key="type">Gene</infon>
|
2789
|
-
<location offset="
|
2789
|
+
<location offset="34778" length="5"/>
|
2790
2790
|
<text>SEC24</text>
|
2791
2791
|
</annotation>
|
2792
2792
|
<annotation id="Team286_A499">
|
2793
2793
|
<infon key="type">Gene</infon>
|
2794
|
-
<location offset="
|
2794
|
+
<location offset="34857" length="5"/>
|
2795
2795
|
<text>SEC12</text>
|
2796
2796
|
</annotation>
|
2797
2797
|
<annotation id="Team286_A500">
|
2798
2798
|
<infon key="type">Gene</infon>
|
2799
|
-
<location offset="
|
2799
|
+
<location offset="34864" length="5"/>
|
2800
2800
|
<text>SEC13</text>
|
2801
2801
|
</annotation>
|
2802
2802
|
<annotation id="Team286_A501">
|
2803
2803
|
<infon key="type">Gene</infon>
|
2804
|
-
<location offset="
|
2804
|
+
<location offset="34871" length="5"/>
|
2805
2805
|
<text>SEC31</text>
|
2806
2806
|
</annotation>
|
2807
2807
|
<annotation id="Team286_A502">
|
2808
2808
|
<infon key="type">Gene</infon>
|
2809
|
-
<location offset="
|
2809
|
+
<location offset="34881" length="5"/>
|
2810
2810
|
<text>SEC23</text>
|
2811
2811
|
</annotation>
|
2812
2812
|
<annotation id="Team286_A503">
|
2813
2813
|
<infon key="type">Gene</infon>
|
2814
|
-
<location offset="
|
2814
|
+
<location offset="34940" length="5"/>
|
2815
2815
|
<text>SEC23</text>
|
2816
2816
|
</annotation>
|
2817
2817
|
<annotation id="Team286_A504">
|
2818
2818
|
<infon key="type">Gene</infon>
|
2819
|
-
<location offset="
|
2819
|
+
<location offset="35077" length="5"/>
|
2820
2820
|
<text>SEC23</text>
|
2821
2821
|
</annotation>
|
2822
2822
|
<annotation id="Team286_A505">
|
2823
2823
|
<infon key="type">Gene</infon>
|
2824
|
-
<location offset="
|
2824
|
+
<location offset="35135" length="5"/>
|
2825
2825
|
<text>SEC23</text>
|
2826
2826
|
</annotation>
|
2827
2827
|
<annotation id="Team286_A506">
|
2828
2828
|
<infon key="type">Gene</infon>
|
2829
|
-
<location offset="
|
2829
|
+
<location offset="35264" length="5"/>
|
2830
2830
|
<text>Lst1p</text>
|
2831
2831
|
</annotation>
|
2832
2832
|
<annotation id="Team286_A507">
|
2833
2833
|
<infon key="type">Gene</infon>
|
2834
|
-
<location offset="
|
2834
|
+
<location offset="35331" length="5"/>
|
2835
2835
|
<text>Lst1p</text>
|
2836
2836
|
</annotation>
|
2837
2837
|
<annotation id="Team286_A508">
|
2838
2838
|
<infon key="type">Gene</infon>
|
2839
|
-
<location offset="
|
2839
|
+
<location offset="35341" length="6"/>
|
2840
2840
|
<text>Sec24p</text>
|
2841
2841
|
</annotation>
|
2842
2842
|
<annotation id="Team286_A509">
|
2843
2843
|
<infon key="type">Gene</infon>
|
2844
|
-
<location offset="
|
2844
|
+
<location offset="35392" length="22"/>
|
2845
2845
|
<text>vesicle coat complexes</text>
|
2846
2846
|
</annotation>
|
2847
2847
|
<annotation id="Team286_A510">
|
2848
2848
|
<infon key="type">Gene</infon>
|
2849
|
-
<location offset="
|
2849
|
+
<location offset="35432" length="5"/>
|
2850
2850
|
<text>Lst1p</text>
|
2851
2851
|
</annotation>
|
2852
2852
|
</passage>
|
@@ -2946,12 +2946,12 @@
|
|
2946
2946
|
</annotation>
|
2947
2947
|
<annotation id="Team286_A527">
|
2948
2948
|
<infon key="type">Gene</infon>
|
2949
|
-
<location offset="
|
2949
|
+
<location offset="37961" length="16"/>
|
2950
2950
|
<text>lst1Delta mutant</text>
|
2951
2951
|
</annotation>
|
2952
2952
|
<annotation id="Team286_A528">
|
2953
2953
|
<infon key="type">Gene</infon>
|
2954
|
-
<location offset="
|
2954
|
+
<location offset="38015" length="5"/>
|
2955
2955
|
<text>Pma1p</text>
|
2956
2956
|
</annotation>
|
2957
2957
|
</passage>
|
@@ -3051,37 +3051,37 @@
|
|
3051
3051
|
</annotation>
|
3052
3052
|
<annotation id="Team286_A545">
|
3053
3053
|
<infon key="type">Gene</infon>
|
3054
|
-
<location offset="
|
3054
|
+
<location offset="39527" length="25"/>
|
3055
3055
|
<text>ER from lst1Delta mutants</text>
|
3056
3056
|
</annotation>
|
3057
3057
|
<annotation id="Team286_A546">
|
3058
3058
|
<infon key="type">Gene</infon>
|
3059
|
-
<location offset="
|
3059
|
+
<location offset="39565" length="6"/>
|
3060
3060
|
<text>Sec61p</text>
|
3061
3061
|
</annotation>
|
3062
3062
|
<annotation id="Team286_A547">
|
3063
3063
|
<infon key="type">Gene</infon>
|
3064
|
-
<location offset="
|
3064
|
+
<location offset="39665" length="5"/>
|
3065
3065
|
<text>Pma1p</text>
|
3066
3066
|
</annotation>
|
3067
3067
|
<annotation id="Team286_A548">
|
3068
3068
|
<infon key="type">Gene</infon>
|
3069
|
-
<location offset="
|
3069
|
+
<location offset="39772" length="5"/>
|
3070
3070
|
<text>Pma1p</text>
|
3071
3071
|
</annotation>
|
3072
3072
|
<annotation id="Team286_A549">
|
3073
3073
|
<infon key="type">Gene</infon>
|
3074
|
-
<location offset="
|
3074
|
+
<location offset="39919" length="5"/>
|
3075
3075
|
<text>Pma1p</text>
|
3076
3076
|
</annotation>
|
3077
3077
|
<annotation id="Team286_A550">
|
3078
3078
|
<infon key="type">Gene</infon>
|
3079
|
-
<location offset="
|
3079
|
+
<location offset="39977" length="2"/>
|
3080
3080
|
<text>ER</text>
|
3081
3081
|
</annotation>
|
3082
3082
|
<annotation id="Team286_A551">
|
3083
3083
|
<infon key="type">Gene</infon>
|
3084
|
-
<location offset="
|
3084
|
+
<location offset="40014" length="4"/>
|
3085
3085
|
<text>PMA1</text>
|
3086
3086
|
</annotation>
|
3087
3087
|
</passage>
|
@@ -3116,32 +3116,32 @@
|
|
3116
3116
|
</annotation>
|
3117
3117
|
<annotation id="Team286_A557">
|
3118
3118
|
<infon key="type">Gene</infon>
|
3119
|
-
<location offset="
|
3119
|
+
<location offset="40290" length="18"/>
|
3120
3120
|
<text>lst1Delta mutants</text>
|
3121
3121
|
</annotation>
|
3122
3122
|
<annotation id="Team286_A558">
|
3123
3123
|
<infon key="type">Gene</infon>
|
3124
|
-
<location offset="
|
3124
|
+
<location offset="40345" length="17"/>
|
3125
3125
|
<text>lst1Delta mutants</text>
|
3126
3126
|
</annotation>
|
3127
3127
|
<annotation id="Team286_A559">
|
3128
3128
|
<infon key="type">Gene</infon>
|
3129
|
-
<location offset="
|
3129
|
+
<location offset="40419" length="9"/>
|
3130
3130
|
<text>lst1Delta</text>
|
3131
3131
|
</annotation>
|
3132
3132
|
<annotation id="Team286_A560">
|
3133
3133
|
<infon key="type">Gene</infon>
|
3134
|
-
<location offset="
|
3134
|
+
<location offset="40662" length="9"/>
|
3135
3135
|
<text>invertase</text>
|
3136
3136
|
</annotation>
|
3137
3137
|
<annotation id="Team286_A561">
|
3138
3138
|
<infon key="type">Gene</infon>
|
3139
|
-
<location offset="
|
3139
|
+
<location offset="40753" length="9"/>
|
3140
3140
|
<text>invertase</text>
|
3141
3141
|
</annotation>
|
3142
3142
|
<annotation id="Team286_A562">
|
3143
3143
|
<infon key="type">Gene</infon>
|
3144
|
-
<location offset="
|
3144
|
+
<location offset="40946" length="18"/>
|
3145
3145
|
<text>carboxypeptidase Y</text>
|
3146
3146
|
</annotation>
|
3147
3147
|
</passage>
|
@@ -3186,17 +3186,17 @@
|
|
3186
3186
|
</annotation>
|
3187
3187
|
<annotation id="Team286_A570">
|
3188
3188
|
<infon key="type">Gene</infon>
|
3189
|
-
<location offset="
|
3189
|
+
<location offset="41864" length="10"/>
|
3190
3190
|
<text>COPII gene</text>
|
3191
3191
|
</annotation>
|
3192
3192
|
<annotation id="Team286_A571">
|
3193
3193
|
<infon key="type">Gene</infon>
|
3194
|
-
<location offset="
|
3194
|
+
<location offset="41903" length="9"/>
|
3195
3195
|
<text>lst1Delta</text>
|
3196
3196
|
</annotation>
|
3197
3197
|
<annotation id="Team286_A572">
|
3198
3198
|
<infon key="type">Gene</infon>
|
3199
|
-
<location offset="
|
3199
|
+
<location offset="41959" length="5"/>
|
3200
3200
|
<text>Pma1p</text>
|
3201
3201
|
</annotation>
|
3202
3202
|
</passage>
|
@@ -3301,32 +3301,32 @@
|
|
3301
3301
|
</annotation>
|
3302
3302
|
<annotation id="Team286_A590">
|
3303
3303
|
<infon key="type">Gene</infon>
|
3304
|
-
<location offset="
|
3304
|
+
<location offset="43453" length="8"/>
|
3305
3305
|
<text>Lst1p-HA</text>
|
3306
3306
|
</annotation>
|
3307
3307
|
<annotation id="Team286_A591">
|
3308
3308
|
<infon key="type">Gene</infon>
|
3309
|
-
<location offset="
|
3309
|
+
<location offset="43715" length="13"/>
|
3310
3310
|
<text>Lst1p protein</text>
|
3311
3311
|
</annotation>
|
3312
3312
|
<annotation id="Team286_A592">
|
3313
3313
|
<infon key="type">Gene</infon>
|
3314
|
-
<location offset="
|
3314
|
+
<location offset="44002" length="8"/>
|
3315
3315
|
<text>Lst1p-HA</text>
|
3316
3316
|
</annotation>
|
3317
3317
|
<annotation id="Team286_A593">
|
3318
3318
|
<infon key="type">Gene</infon>
|
3319
|
-
<location offset="
|
3319
|
+
<location offset="44039" length="8"/>
|
3320
3320
|
<text>Fig. 9 B</text>
|
3321
3321
|
</annotation>
|
3322
3322
|
<annotation id="Team286_A594">
|
3323
3323
|
<infon key="type">Gene</infon>
|
3324
|
-
<location offset="
|
3324
|
+
<location offset="44079" length="8"/>
|
3325
3325
|
<text>Lst1p-HA</text>
|
3326
3326
|
</annotation>
|
3327
3327
|
<annotation id="Team286_A595">
|
3328
3328
|
<infon key="type">Gene</infon>
|
3329
|
-
<location offset="
|
3329
|
+
<location offset="44150" length="5"/>
|
3330
3330
|
<text>Lst1p</text>
|
3331
3331
|
</annotation>
|
3332
3332
|
</passage>
|
@@ -3346,7 +3346,7 @@
|
|
3346
3346
|
</annotation>
|
3347
3347
|
<annotation id="TEAM_336_PPI4">
|
3348
3348
|
<infon key="type">PPImention</infon>
|
3349
|
-
<location offset="44229" length="18"/>
|
3349
|
+
<location offset="44229" length="18" original_offset="0"/>
|
3350
3350
|
<text>Lst1p Binds Sec23p</text>
|
3351
3351
|
</annotation>
|
3352
3352
|
</passage>
|
@@ -3556,12 +3556,12 @@
|
|
3556
3556
|
</annotation>
|
3557
3557
|
<annotation id="TEAM_336_PPI5">
|
3558
3558
|
<infon key="type">PPImention</infon>
|
3559
|
-
<location offset="45031" length="120"/>
|
3559
|
+
<location offset="45031" length="120" original_offset="0"/>
|
3560
3560
|
<text>To confirm the interaction between Lst1p and Sec23p, association of these proteins was examined in yeast cell extracts.</text>
|
3561
3561
|
</annotation>
|
3562
3562
|
<annotation id="TEAM_336_PPI6">
|
3563
3563
|
<infon key="type">PPImention</infon>
|
3564
|
-
<location offset="45913" length="90"/>
|
3564
|
+
<location offset="45913" length="90" original_offset="0"/>
|
3565
3565
|
<text>Together, these experiments show that Lst1p, like Sec24p, can form a complex with Sec23p.</text>
|
3566
3566
|
</annotation>
|
3567
3567
|
</passage>
|
@@ -3581,232 +3581,232 @@
|
|
3581
3581
|
</annotation>
|
3582
3582
|
<annotation id="Team286_A639">
|
3583
3583
|
<infon key="type">Gene</infon>
|
3584
|
-
<location offset="
|
3584
|
+
<location offset="46174" length="6"/>
|
3585
3585
|
<text>Sec23p</text>
|
3586
3586
|
</annotation>
|
3587
3587
|
<annotation id="Team286_A640">
|
3588
3588
|
<infon key="type">Gene</infon>
|
3589
|
-
<location offset="
|
3589
|
+
<location offset="46190" length="3"/>
|
3590
3590
|
<text>GST</text>
|
3591
3591
|
</annotation>
|
3592
3592
|
<annotation id="Team286_A641">
|
3593
3593
|
<infon key="type">Gene</infon>
|
3594
|
-
<location offset="
|
3594
|
+
<location offset="46194" length="5"/>
|
3595
3595
|
<text>Lst1p</text>
|
3596
3596
|
</annotation>
|
3597
3597
|
<annotation id="Team286_A642">
|
3598
3598
|
<infon key="type">Gene</infon>
|
3599
|
-
<location offset="
|
3599
|
+
<location offset="46200" length="2"/>
|
3600
3600
|
<text>HA</text>
|
3601
3601
|
</annotation>
|
3602
3602
|
<annotation id="Team286_A643">
|
3603
3603
|
<infon key="type">Gene</infon>
|
3604
|
-
<location offset="
|
3604
|
+
<location offset="46238" length="5"/>
|
3605
3605
|
<text>Lst1p</text>
|
3606
3606
|
</annotation>
|
3607
3607
|
<annotation id="Team286_A644">
|
3608
3608
|
<infon key="type">Gene</infon>
|
3609
|
-
<location offset="
|
3609
|
+
<location offset="46244" length="6"/>
|
3610
3610
|
<text>Sec23p</text>
|
3611
3611
|
</annotation>
|
3612
3612
|
<annotation id="Team286_A645">
|
3613
3613
|
<infon key="type">Gene</infon>
|
3614
|
-
<location offset="
|
3614
|
+
<location offset="46345" length="3"/>
|
3615
3615
|
<text>GST</text>
|
3616
3616
|
</annotation>
|
3617
3617
|
<annotation id="Team286_A646">
|
3618
3618
|
<infon key="type">Gene</infon>
|
3619
|
-
<location offset="
|
3619
|
+
<location offset="46349" length="5"/>
|
3620
3620
|
<text>Lst1p</text>
|
3621
3621
|
</annotation>
|
3622
3622
|
<annotation id="Team286_A647">
|
3623
3623
|
<infon key="type">Gene</infon>
|
3624
|
-
<location offset="
|
3624
|
+
<location offset="46355" length="2"/>
|
3625
3625
|
<text>HA</text>
|
3626
3626
|
</annotation>
|
3627
3627
|
<annotation id="Team286_A648">
|
3628
3628
|
<infon key="type">Gene</infon>
|
3629
|
-
<location offset="
|
3629
|
+
<location offset="46362" length="6"/>
|
3630
3630
|
<text>Sec23p</text>
|
3631
3631
|
</annotation>
|
3632
3632
|
<annotation id="Team286_A649">
|
3633
3633
|
<infon key="type">Gene</infon>
|
3634
|
-
<location offset="
|
3634
|
+
<location offset="46418" length="6"/>
|
3635
3635
|
<text>Sec23p</text>
|
3636
3636
|
</annotation>
|
3637
3637
|
<annotation id="Team286_A650">
|
3638
3638
|
<infon key="type">Gene</infon>
|
3639
|
-
<location offset="
|
3639
|
+
<location offset="46442" length="3"/>
|
3640
3640
|
<text>GST</text>
|
3641
3641
|
</annotation>
|
3642
3642
|
<annotation id="Team286_A651">
|
3643
3643
|
<infon key="type">Gene</infon>
|
3644
|
-
<location offset="
|
3644
|
+
<location offset="46446" length="5"/>
|
3645
3645
|
<text>Lst1p</text>
|
3646
3646
|
</annotation>
|
3647
3647
|
<annotation id="Team286_A652">
|
3648
3648
|
<infon key="type">Gene</infon>
|
3649
|
-
<location offset="
|
3649
|
+
<location offset="46452" length="2"/>
|
3650
3650
|
<text>HA</text>
|
3651
3651
|
</annotation>
|
3652
3652
|
<annotation id="Team286_A653">
|
3653
3653
|
<infon key="type">Gene</infon>
|
3654
|
-
<location offset="
|
3654
|
+
<location offset="46575" length="27"/>
|
3655
3655
|
<text>ER membrane protein Sec61p</text>
|
3656
3656
|
</annotation>
|
3657
3657
|
<annotation id="Team286_A654">
|
3658
3658
|
<infon key="type">Gene</infon>
|
3659
|
-
<location offset="
|
3659
|
+
<location offset="46761" length="3"/>
|
3660
3660
|
<text>GST</text>
|
3661
3661
|
</annotation>
|
3662
3662
|
<annotation id="Team286_A655">
|
3663
3663
|
<infon key="type">Gene</infon>
|
3664
|
-
<location offset="
|
3664
|
+
<location offset="46766" length="5"/>
|
3665
3665
|
<text>Lst1p</text>
|
3666
3666
|
</annotation>
|
3667
3667
|
<annotation id="Team286_A656">
|
3668
3668
|
<infon key="type">Gene</infon>
|
3669
|
-
<location offset="
|
3669
|
+
<location offset="46772" length="2"/>
|
3670
3670
|
<text>HA</text>
|
3671
3671
|
</annotation>
|
3672
3672
|
<annotation id="Team286_A657">
|
3673
3673
|
<infon key="type">Gene</infon>
|
3674
|
-
<location offset="
|
3674
|
+
<location offset="46779" length="6"/>
|
3675
3675
|
<text>Sec23p</text>
|
3676
3676
|
</annotation>
|
3677
3677
|
<annotation id="Team286_A658">
|
3678
3678
|
<infon key="type">Gene</infon>
|
3679
|
-
<location offset="
|
3679
|
+
<location offset="46810" length="29"/>
|
3680
3680
|
<text>ER resident membrane protein</text>
|
3681
3681
|
</annotation>
|
3682
3682
|
<annotation id="Team286_A659">
|
3683
3683
|
<infon key="type">Gene</infon>
|
3684
|
-
<location offset="
|
3684
|
+
<location offset="46841" length="6"/>
|
3685
3685
|
<text>Sec61p</text>
|
3686
3686
|
</annotation>
|
3687
3687
|
<annotation id="Team286_A660">
|
3688
3688
|
<infon key="type">Gene</infon>
|
3689
|
-
<location offset="
|
3689
|
+
<location offset="46906" length="3"/>
|
3690
3690
|
<text>GST</text>
|
3691
3691
|
</annotation>
|
3692
3692
|
<annotation id="Team286_A661">
|
3693
3693
|
<infon key="type">Gene</infon>
|
3694
|
-
<location offset="
|
3694
|
+
<location offset="46910" length="5"/>
|
3695
3695
|
<text>Lst1p</text>
|
3696
3696
|
</annotation>
|
3697
3697
|
<annotation id="Team286_A662">
|
3698
3698
|
<infon key="type">Gene</infon>
|
3699
|
-
<location offset="
|
3699
|
+
<location offset="46916" length="2"/>
|
3700
3700
|
<text>HA</text>
|
3701
3701
|
</annotation>
|
3702
3702
|
<annotation id="Team286_A663">
|
3703
3703
|
<infon key="type">Gene</infon>
|
3704
|
-
<location offset="
|
3704
|
+
<location offset="46923" length="6"/>
|
3705
3705
|
<text>Sec23p</text>
|
3706
3706
|
</annotation>
|
3707
3707
|
<annotation id="Team286_A664">
|
3708
3708
|
<infon key="type">Gene</infon>
|
3709
|
-
<location offset="
|
3709
|
+
<location offset="47009" length="6"/>
|
3710
3710
|
<text>Sec23p</text>
|
3711
3711
|
</annotation>
|
3712
3712
|
<annotation id="Team286_A665">
|
3713
3713
|
<infon key="type">Gene</infon>
|
3714
|
-
<location offset="
|
3714
|
+
<location offset="47020" length="3"/>
|
3715
3715
|
<text>GST</text>
|
3716
3716
|
</annotation>
|
3717
3717
|
<annotation id="Team286_A666">
|
3718
3718
|
<infon key="type">Gene</infon>
|
3719
|
-
<location offset="
|
3719
|
+
<location offset="47024" length="5"/>
|
3720
3720
|
<text>Lst1p</text>
|
3721
3721
|
</annotation>
|
3722
3722
|
<annotation id="Team286_A667">
|
3723
3723
|
<infon key="type">Gene</infon>
|
3724
|
-
<location offset="
|
3724
|
+
<location offset="47030" length="2"/>
|
3725
3725
|
<text>HA</text>
|
3726
3726
|
</annotation>
|
3727
3727
|
<annotation id="Team286_A668">
|
3728
3728
|
<infon key="type">Gene</infon>
|
3729
|
-
<location offset="
|
3729
|
+
<location offset="47071" length="6"/>
|
3730
3730
|
<text>Sec23p</text>
|
3731
3731
|
</annotation>
|
3732
3732
|
<annotation id="Team286_A669">
|
3733
3733
|
<infon key="type">Gene</infon>
|
3734
|
-
<location offset="
|
3734
|
+
<location offset="47140" length="6"/>
|
3735
3735
|
<text>Sec23p</text>
|
3736
3736
|
</annotation>
|
3737
3737
|
<annotation id="Team286_A670">
|
3738
3738
|
<infon key="type">Gene</infon>
|
3739
|
-
<location offset="
|
3739
|
+
<location offset="47177" length="3"/>
|
3740
3740
|
<text>GST</text>
|
3741
3741
|
</annotation>
|
3742
3742
|
<annotation id="Team286_A671">
|
3743
3743
|
<infon key="type">Gene</infon>
|
3744
|
-
<location offset="
|
3744
|
+
<location offset="47181" length="5"/>
|
3745
3745
|
<text>Lst1p</text>
|
3746
3746
|
</annotation>
|
3747
3747
|
<annotation id="Team286_A672">
|
3748
3748
|
<infon key="type">Gene</infon>
|
3749
|
-
<location offset="
|
3749
|
+
<location offset="47187" length="2"/>
|
3750
3750
|
<text>HA</text>
|
3751
3751
|
</annotation>
|
3752
3752
|
<annotation id="Team286_A673">
|
3753
3753
|
<infon key="type">Gene</infon>
|
3754
|
-
<location offset="
|
3754
|
+
<location offset="47248" length="3"/>
|
3755
3755
|
<text>GST</text>
|
3756
3756
|
</annotation>
|
3757
3757
|
<annotation id="Team286_A674">
|
3758
3758
|
<infon key="type">Gene</infon>
|
3759
|
-
<location offset="
|
3759
|
+
<location offset="47252" length="5"/>
|
3760
3760
|
<text>Lst1p</text>
|
3761
3761
|
</annotation>
|
3762
3762
|
<annotation id="Team286_A675">
|
3763
3763
|
<infon key="type">Gene</infon>
|
3764
|
-
<location offset="
|
3764
|
+
<location offset="47299" length="6"/>
|
3765
3765
|
<text>Sec23p</text>
|
3766
3766
|
</annotation>
|
3767
3767
|
<annotation id="Team286_A676">
|
3768
3768
|
<infon key="type">Gene</infon>
|
3769
|
-
<location offset="
|
3769
|
+
<location offset="47309" length="3"/>
|
3770
3770
|
<text>GST</text>
|
3771
3771
|
</annotation>
|
3772
3772
|
<annotation id="Team286_A677">
|
3773
3773
|
<infon key="type">Gene</infon>
|
3774
|
-
<location offset="
|
3774
|
+
<location offset="47313" length="5"/>
|
3775
3775
|
<text>Lst1p</text>
|
3776
3776
|
</annotation>
|
3777
3777
|
<annotation id="Team286_A678">
|
3778
3778
|
<infon key="type">Gene</infon>
|
3779
|
-
<location offset="
|
3779
|
+
<location offset="47319" length="2"/>
|
3780
3780
|
<text>HA</text>
|
3781
3781
|
</annotation>
|
3782
3782
|
<annotation id="Team286_A679">
|
3783
3783
|
<infon key="type">Gene</infon>
|
3784
|
-
<location offset="
|
3784
|
+
<location offset="47543" length="5"/>
|
3785
3785
|
<text>Lst1p</text>
|
3786
3786
|
</annotation>
|
3787
3787
|
<annotation id="Team286_A680">
|
3788
3788
|
<infon key="type">Gene</infon>
|
3789
|
-
<location offset="
|
3789
|
+
<location offset="47574" length="6"/>
|
3790
3790
|
<text>Sec23p</text>
|
3791
3791
|
</annotation>
|
3792
3792
|
<annotation id="Team286_A681">
|
3793
3793
|
<infon key="type">Gene</infon>
|
3794
|
-
<location offset="
|
3794
|
+
<location offset="47595" length="5"/>
|
3795
3795
|
<text>Lst1p</text>
|
3796
3796
|
</annotation>
|
3797
3797
|
<annotation id="Team286_A682">
|
3798
3798
|
<infon key="type">Gene</infon>
|
3799
|
-
<location offset="
|
3799
|
+
<location offset="47602" length="6"/>
|
3800
3800
|
<text>Sec23p</text>
|
3801
3801
|
</annotation>
|
3802
3802
|
<annotation id="TEAM_336_PPI7">
|
3803
3803
|
<infon key="type">PPImention</infon>
|
3804
|
-
<location offset="
|
3804
|
+
<location offset="46120" length="213" original_offset="0"/>
|
3805
3805
|
<text>While working out conditions to optimize recovery of Sec23p bound to GST-Lst1p-HA, we discovered that assembly of an Lst1p/Sec23p complex appears to enhance the association of both proteins with the ER membrane.</text>
|
3806
3806
|
</annotation>
|
3807
3807
|
<annotation id="TEAM_336_PPI8">
|
3808
3808
|
<infon key="type">PPImention</infon>
|
3809
|
-
<location offset="
|
3809
|
+
<location offset="47503" length="144" original_offset="0"/>
|
3810
3810
|
<text>These data support the observation that Lst1p can form a complex with Sec23p, and that the Lst1p/ Sec23p complex has affinity for ER membranes.</text>
|
3811
3811
|
</annotation>
|
3812
3812
|
</passage>
|
@@ -3946,62 +3946,62 @@
|
|
3946
3946
|
</annotation>
|
3947
3947
|
<annotation id="Team286_A708">
|
3948
3948
|
<infon key="type">Gene</infon>
|
3949
|
-
<location offset="
|
3949
|
+
<location offset="48915" length="6"/>
|
3950
3950
|
<text>Sec23p</text>
|
3951
3951
|
</annotation>
|
3952
3952
|
<annotation id="Team286_A709">
|
3953
3953
|
<infon key="type">Gene</infon>
|
3954
|
-
<location offset="
|
3954
|
+
<location offset="48922" length="5"/>
|
3955
3955
|
<text>Lst1p</text>
|
3956
3956
|
</annotation>
|
3957
3957
|
<annotation id="Team286_A710">
|
3958
3958
|
<infon key="type">Gene</infon>
|
3959
|
-
<location offset="
|
3959
|
+
<location offset="48989" length="5"/>
|
3960
3960
|
<text>Lst1p</text>
|
3961
3961
|
</annotation>
|
3962
3962
|
<annotation id="Team286_A711">
|
3963
3963
|
<infon key="type">Gene</infon>
|
3964
|
-
<location offset="
|
3964
|
+
<location offset="49000" length="6"/>
|
3965
3965
|
<text>Sec23p</text>
|
3966
3966
|
</annotation>
|
3967
3967
|
<annotation id="Team286_A712">
|
3968
3968
|
<infon key="type">Gene</infon>
|
3969
|
-
<location offset="
|
3969
|
+
<location offset="49203" length="4"/>
|
3970
3970
|
<text>LST1</text>
|
3971
3971
|
</annotation>
|
3972
3972
|
<annotation id="Team286_A713">
|
3973
3973
|
<infon key="type">Gene</infon>
|
3974
|
-
<location offset="
|
3974
|
+
<location offset="49320" length="5"/>
|
3975
3975
|
<text>Pma1p</text>
|
3976
3976
|
</annotation>
|
3977
3977
|
<annotation id="Team286_A714">
|
3978
3978
|
<infon key="type">Gene</infon>
|
3979
|
-
<location offset="
|
3979
|
+
<location offset="49334" length="2"/>
|
3980
3980
|
<text>ER</text>
|
3981
3981
|
</annotation>
|
3982
3982
|
<annotation id="Team286_A715">
|
3983
3983
|
<infon key="type">Gene</infon>
|
3984
|
-
<location offset="
|
3984
|
+
<location offset="49434" length="5"/>
|
3985
3985
|
<text>Lst1p</text>
|
3986
3986
|
</annotation>
|
3987
3987
|
<annotation id="Team286_A716">
|
3988
3988
|
<infon key="type">Gene</infon>
|
3989
|
-
<location offset="
|
3989
|
+
<location offset="49460" length="6"/>
|
3990
3990
|
<text>Sec24p</text>
|
3991
3991
|
</annotation>
|
3992
3992
|
<annotation id="Team286_A717">
|
3993
3993
|
<infon key="type">Gene</infon>
|
3994
|
-
<location offset="
|
3994
|
+
<location offset="49484" length="18"/>
|
3995
3995
|
<text>COPII coat complex</text>
|
3996
3996
|
</annotation>
|
3997
3997
|
<annotation id="Team286_A718">
|
3998
3998
|
<infon key="type">Gene</infon>
|
3999
|
-
<location offset="
|
3999
|
+
<location offset="49540" length="5"/>
|
4000
4000
|
<text>Pma1p</text>
|
4001
4001
|
</annotation>
|
4002
4002
|
<annotation id="TEAM_336_PPI9">
|
4003
4003
|
<infon key="type">PPImention</infon>
|
4004
|
-
<location offset="48738" length="154"/>
|
4004
|
+
<location offset="48738" length="154" original_offset="0"/>
|
4005
4005
|
<text>(III) Lst1p, like Sec24p, can bind to Sec23p as shown by tests for two-hybrid interaction and affinity purification of a complex of GST-Lst1p and Sec23p.</text>
|
4006
4006
|
</annotation>
|
4007
4007
|
</passage>
|
@@ -4426,32 +4426,32 @@
|
|
4426
4426
|
</annotation>
|
4427
4427
|
<annotation id="Team286_A796">
|
4428
4428
|
<infon key="type">Gene</infon>
|
4429
|
-
<location offset="
|
4429
|
+
<location offset="55726" length="5"/>
|
4430
4430
|
<text>Lst1p</text>
|
4431
4431
|
</annotation>
|
4432
4432
|
<annotation id="Team286_A797">
|
4433
4433
|
<infon key="type">Gene</infon>
|
4434
|
-
<location offset="
|
4434
|
+
<location offset="55761" length="6"/>
|
4435
4435
|
<text>Sec24p</text>
|
4436
4436
|
</annotation>
|
4437
4437
|
<annotation id="Team286_A798">
|
4438
4438
|
<infon key="type">Gene</infon>
|
4439
|
-
<location offset="
|
4439
|
+
<location offset="55801" length="5"/>
|
4440
4440
|
<text>Pma1p</text>
|
4441
4441
|
</annotation>
|
4442
4442
|
<annotation id="Team286_A799">
|
4443
4443
|
<infon key="type">Gene</infon>
|
4444
|
-
<location offset="
|
4444
|
+
<location offset="55847" length="12"/>
|
4445
4445
|
<text>Sec24 family</text>
|
4446
4446
|
</annotation>
|
4447
4447
|
<annotation id="TEAM_336_PPI10">
|
4448
4448
|
<infon key="type">PPImention</infon>
|
4449
|
-
<location offset="55027" length="257"/>
|
4449
|
+
<location offset="55027" length="257" original_offset="0"/>
|
4450
4450
|
<text>Using ER-derived microsomes and purified COPII components, Kuehn et al. (1998) have shown that the Sec23p/Sec24p complex, along with Sar1p, associate with amino acid permeases and other integral membrane protein that are destined for the plasma membrane.</text>
|
4451
4451
|
</annotation>
|
4452
4452
|
<annotation id="TEAM_336_PPI11">
|
4453
4453
|
<infon key="type">PPImention</infon>
|
4454
|
-
<location offset="55498" length="192"/>
|
4454
|
+
<location offset="55498" length="192" original_offset="0"/>
|
4455
4455
|
<text>The conclusion from both experimental systems is that the Sec23p/Sec24p complex contains specific binding sites for the capture of membrane cargo proteins within the plane of the ER membrane.</text>
|
4456
4456
|
</annotation>
|
4457
4457
|
</passage>
|
@@ -4531,7 +4531,7 @@
|
|
4531
4531
|
</annotation>
|
4532
4532
|
<annotation id="TEAM_336_PPI12">
|
4533
4533
|
<infon key="type">PPImention</infon>
|
4534
|
-
<location offset="56337" length="495"/>
|
4534
|
+
<location offset="56337" length="495" original_offset="0"/>
|
4535
4535
|
<text>In future experiments, it may be possible to isolate vesicles coated with Lst1p by performing an in vitro budding reaction using purified cytosolic components, including a purified complex of Lst1p and Sec23p. It may also be possible to determine whether vesicles that are formed using a Sec23p/Lst1p complex more efficiently incorporate Pma1p than vesicles formed using the Sec23p/Sec24p complex. Finally, it will be of interest to determine if there is direct binding of Lst1p to Pma1p.</text>
|
4536
4536
|
</annotation>
|
4537
4537
|
</passage>
|
@@ -4626,12 +4626,12 @@
|
|
4626
4626
|
</annotation>
|
4627
4627
|
<annotation id="TEAM_336_PPI13">
|
4628
4628
|
<infon key="type">PPImention</infon>
|
4629
|
-
<location offset="56999" length="139"/>
|
4629
|
+
<location offset="56999" length="139" original_offset="0"/>
|
4630
4630
|
<text>It is possible that Sec23p/Lst1p complexes act to form a class of vesicle that is distinct from those formed by Sec23p/ Sec24p complexes.</text>
|
4631
4631
|
</annotation>
|
4632
4632
|
<annotation id="TEAM_336_PPI14">
|
4633
4633
|
<infon key="type">PPImention</infon>
|
4634
|
-
<location offset="57403" length="208"/>
|
4634
|
+
<location offset="57403" length="208" original_offset="0"/>
|
4635
4635
|
<text>We have identified a third Sec24p family member, which we call Iss1p, as a protein that binds to Sec16p. Iss1p (YNL049c) also binds Sec23p and appears to be associated with the ER membrane (Gimeno, 1996).</text>
|
4636
4636
|
</annotation>
|
4637
4637
|
</passage>
|
@@ -4651,297 +4651,297 @@
|
|
4651
4651
|
<text>Strain Genotype Source or reference CUY563 MATaade2-101 ade3-24 leu2-3,112 ura3-52 T. Huffaker (Cornell University) CUY564 MATalpha ade2-101 ade3-2 leu2-3,112 ura3-52 T. Huffaker (Cornell University) EGY40 MATalpha ura3-52 leu2 his3 trp1 Golemis and Brent, 1992 CKY45 MATalpha sec13-1 his4-619 ura3-52 Kaiser Lab Collection CKY50 MATalpha sec16-2 his4-619 ura3-52 Kaiser Lab Collection CKY54 MATalpha sec17-1 his4-619 ura3-52 Kaiser Lab Collection CKY58 MATalpha sec18-1 his4-619 ura3-52 Kaiser Lab Collection CKY78 MATalpha sec23-1 his4-619 ura3-52 Kaiser Lab Collection CKY348 MATa/alpha leu2-3/leu2-3 ura3-52/ura3-52 Kaiser Lab Collection CKY423 MATalpha sec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52 [pKR4] CKY424 MATasec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52 [pKR4] CKY426 MATalst1-1sec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52 [pKR4] CKY435 MATalst1-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY436 MATalst2-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY437 MATalst3-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY438 MATalst4-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY439 MATalst5-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY440 MATalst6-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY441 MATalst7-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY442 MATalst8-1 sec13-1::[SEC13, URA3] ade2-101 ade3-24 leu2-3,112 ura3-52 CKY443 MATa prototroph Kaiser Lab Collection CKY473 MATaleu2-3,112 ura3-52 Gal+ Kaiser Lab Collection CKY534 MATalpha lst1Delta::LEU2 leu2-3,112 ura3-52 [pKR17HA] CKY535 MATalst1Delta::LEU2 leu2-3,112 ura3-52 [pKR17HA] CKY536 MATalst1Delta::LEU2 ura3-52 leu2-3,112 CKY540 MATaleu2-3,112 ura3-52 [pNV31] CKY541 MATasec12-4 ura3-52 [pNV31] CKY542 MATalst1Delta::LEU2 leu2-3,112 ura3-52 [pNV31] CKY552 MATalpha lst1Delta::LEU2 leu2-3,112 ura3-52</text>
|
4652
4652
|
<annotation id="Team286_A831">
|
4653
4653
|
<infon key="type">Gene</infon>
|
4654
|
-
<location offset="
|
4654
|
+
<location offset="58196" length="35"/>
|
4655
4655
|
<text>CUY563 MATaade2-101 ade3-24 leu2-3</text>
|
4656
4656
|
</annotation>
|
4657
4657
|
<annotation id="Team286_A832">
|
4658
4658
|
<infon key="type">Gene</infon>
|
4659
|
-
<location offset="
|
4659
|
+
<location offset="58287" length="31"/>
|
4660
4660
|
<text>MATalpha ade2-101 ade3-2 leu2-3</text>
|
4661
4661
|
</annotation>
|
4662
4662
|
<annotation id="Team286_A833">
|
4663
4663
|
<infon key="type">Gene</infon>
|
4664
|
-
<location offset="
|
4664
|
+
<location offset="58373" length="175"/>
|
4665
4665
|
<text>MATalpha ura3-52 leu2 his3 trp1 Golemis and Brent, 1992 CKY45 MATalpha sec13-1 his4-619 ura3-52 Kaiser Lab Collection CKY50 MATalpha sec16-2 his4-619 ura3-52 Kaiser Lab</text>
|
4666
4666
|
</annotation>
|
4667
4667
|
<annotation id="Team286_A834">
|
4668
4668
|
<infon key="type">Gene</infon>
|
4669
|
-
<location offset="
|
4669
|
+
<location offset="58561" length="52"/>
|
4670
4670
|
<text>CKY54 MATalpha sec17-1 his4-619 ura3-52 Kaiser Lab</text>
|
4671
4671
|
</annotation>
|
4672
4672
|
<annotation id="Team286_A835">
|
4673
4673
|
<infon key="type">Gene</infon>
|
4674
|
-
<location offset="
|
4674
|
+
<location offset="58626" length="117"/>
|
4675
4675
|
<text>CKY58 MATalpha sec18-1 his4-619 ura3-52 Kaiser Lab Collection CKY78 MATalpha sec23-1 his4-619 ura3-52 Kaiser Lab</text>
|
4676
4676
|
</annotation>
|
4677
4677
|
<annotation id="Team286_A836">
|
4678
4678
|
<infon key="type">Gene</infon>
|
4679
|
-
<location offset="
|
4679
|
+
<location offset="58756" length="25"/>
|
4680
4680
|
<text>CKY348 MATa/alpha leu2-3</text>
|
4681
4681
|
</annotation>
|
4682
4682
|
<annotation id="Team286_A837">
|
4683
4683
|
<infon key="type">Gene</infon>
|
4684
|
-
<location offset="
|
4684
|
+
<location offset="58782" length="14"/>
|
4685
4685
|
<text>leu2-3 ura3-52</text>
|
4686
4686
|
</annotation>
|
4687
4687
|
<annotation id="Team286_A838">
|
4688
4688
|
<infon key="type">Gene</infon>
|
4689
|
-
<location offset="
|
4689
|
+
<location offset="58797" length="158"/>
|
4690
4690
|
<text>ura3-52 Kaiser Lab Collection CKY423 MATalpha sec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52 [pKR4] CKY424 MATasec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52</text>
|
4691
4691
|
</annotation>
|
4692
4692
|
<annotation id="Team286_A839">
|
4693
4693
|
<infon key="type">Gene</infon>
|
4694
|
-
<location offset="
|
4694
|
+
<location offset="58957" length="4"/>
|
4695
4695
|
<text>pKR4</text>
|
4696
4696
|
</annotation>
|
4697
4697
|
<annotation id="Team286_A840">
|
4698
4698
|
<infon key="type">Gene</infon>
|
4699
|
-
<location offset="
|
4699
|
+
<location offset="58966" length="61"/>
|
4700
4700
|
<text>CKY426 MATalst1-1sec13-1 ade2-101 ade3-24 leu2-3,112 ura3-52</text>
|
4701
4701
|
</annotation>
|
4702
4702
|
<annotation id="Team286_A841">
|
4703
4703
|
<infon key="type">Gene</infon>
|
4704
|
-
<location offset="
|
4704
|
+
<location offset="59029" length="4"/>
|
4705
4705
|
<text>pKR4</text>
|
4706
4706
|
</annotation>
|
4707
4707
|
<annotation id="Team286_A842">
|
4708
4708
|
<infon key="type">Gene</infon>
|
4709
|
-
<location offset="
|
4709
|
+
<location offset="59038" length="26"/>
|
4710
4710
|
<text>CKY435 MATalst1-1 sec13-1</text>
|
4711
4711
|
</annotation>
|
4712
4712
|
<annotation id="Team286_A843">
|
4713
4713
|
<infon key="type">Gene</infon>
|
4714
|
-
<location offset="
|
4714
|
+
<location offset="59067" length="5"/>
|
4715
4715
|
<text>SEC13</text>
|
4716
4716
|
</annotation>
|
4717
4717
|
<annotation id="Team286_A844">
|
4718
4718
|
<infon key="type">Gene</infon>
|
4719
|
-
<location offset="
|
4719
|
+
<location offset="59074" length="4"/>
|
4720
4720
|
<text>URA3</text>
|
4721
4721
|
</annotation>
|
4722
4722
|
<annotation id="Team286_A845">
|
4723
4723
|
<infon key="type">Gene</infon>
|
4724
|
-
<location offset="
|
4724
|
+
<location offset="59080" length="23"/>
|
4725
4725
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4726
4726
|
</annotation>
|
4727
4727
|
<annotation id="Team286_A846">
|
4728
4728
|
<infon key="type">Gene</infon>
|
4729
|
-
<location offset="
|
4729
|
+
<location offset="59104" length="3"/>
|
4730
4730
|
<text>112</text>
|
4731
4731
|
</annotation>
|
4732
4732
|
<annotation id="Team286_A847">
|
4733
4733
|
<infon key="type">Gene</infon>
|
4734
|
-
<location offset="
|
4734
|
+
<location offset="59108" length="37"/>
|
4735
4735
|
<text>ura3-52 CKY436 MATalst2-1 sec13-1</text>
|
4736
4736
|
</annotation>
|
4737
4737
|
<annotation id="Team286_A848">
|
4738
4738
|
<infon key="type">Gene</infon>
|
4739
|
-
<location offset="
|
4739
|
+
<location offset="59148" length="5"/>
|
4740
4740
|
<text>SEC13</text>
|
4741
4741
|
</annotation>
|
4742
4742
|
<annotation id="Team286_A849">
|
4743
4743
|
<infon key="type">Gene</infon>
|
4744
|
-
<location offset="
|
4744
|
+
<location offset="59155" length="4"/>
|
4745
4745
|
<text>URA3</text>
|
4746
4746
|
</annotation>
|
4747
4747
|
<annotation id="Team286_A850">
|
4748
4748
|
<infon key="type">Gene</infon>
|
4749
|
-
<location offset="
|
4749
|
+
<location offset="59161" length="23"/>
|
4750
4750
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4751
4751
|
</annotation>
|
4752
4752
|
<annotation id="Team286_A851">
|
4753
4753
|
<infon key="type">Gene</infon>
|
4754
|
-
<location offset="
|
4754
|
+
<location offset="59185" length="3"/>
|
4755
4755
|
<text>112</text>
|
4756
4756
|
</annotation>
|
4757
4757
|
<annotation id="Team286_A852">
|
4758
4758
|
<infon key="type">Gene</infon>
|
4759
|
-
<location offset="
|
4759
|
+
<location offset="59189" length="37"/>
|
4760
4760
|
<text>ura3-52 CKY437 MATalst3-1 sec13-1</text>
|
4761
4761
|
</annotation>
|
4762
4762
|
<annotation id="Team286_A853">
|
4763
4763
|
<infon key="type">Gene</infon>
|
4764
|
-
<location offset="
|
4764
|
+
<location offset="59229" length="5"/>
|
4765
4765
|
<text>SEC13</text>
|
4766
4766
|
</annotation>
|
4767
4767
|
<annotation id="Team286_A854">
|
4768
4768
|
<infon key="type">Gene</infon>
|
4769
|
-
<location offset="
|
4769
|
+
<location offset="59236" length="4"/>
|
4770
4770
|
<text>URA3</text>
|
4771
4771
|
</annotation>
|
4772
4772
|
<annotation id="Team286_A855">
|
4773
4773
|
<infon key="type">Gene</infon>
|
4774
|
-
<location offset="
|
4774
|
+
<location offset="59242" length="23"/>
|
4775
4775
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4776
4776
|
</annotation>
|
4777
4777
|
<annotation id="Team286_A856">
|
4778
4778
|
<infon key="type">Gene</infon>
|
4779
|
-
<location offset="
|
4779
|
+
<location offset="59266" length="3"/>
|
4780
4780
|
<text>112</text>
|
4781
4781
|
</annotation>
|
4782
4782
|
<annotation id="Team286_A857">
|
4783
4783
|
<infon key="type">Gene</infon>
|
4784
|
-
<location offset="
|
4784
|
+
<location offset="59270" length="37"/>
|
4785
4785
|
<text>ura3-52 CKY438 MATalst4-1 sec13-1</text>
|
4786
4786
|
</annotation>
|
4787
4787
|
<annotation id="Team286_A858">
|
4788
4788
|
<infon key="type">Gene</infon>
|
4789
|
-
<location offset="
|
4789
|
+
<location offset="59310" length="5"/>
|
4790
4790
|
<text>SEC13</text>
|
4791
4791
|
</annotation>
|
4792
4792
|
<annotation id="Team286_A859">
|
4793
4793
|
<infon key="type">Gene</infon>
|
4794
|
-
<location offset="
|
4794
|
+
<location offset="59317" length="4"/>
|
4795
4795
|
<text>URA3</text>
|
4796
4796
|
</annotation>
|
4797
4797
|
<annotation id="Team286_A860">
|
4798
4798
|
<infon key="type">Gene</infon>
|
4799
|
-
<location offset="
|
4799
|
+
<location offset="59323" length="23"/>
|
4800
4800
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4801
4801
|
</annotation>
|
4802
4802
|
<annotation id="Team286_A861">
|
4803
4803
|
<infon key="type">Gene</infon>
|
4804
|
-
<location offset="
|
4804
|
+
<location offset="59347" length="3"/>
|
4805
4805
|
<text>112</text>
|
4806
4806
|
</annotation>
|
4807
4807
|
<annotation id="Team286_A862">
|
4808
4808
|
<infon key="type">Gene</infon>
|
4809
|
-
<location offset="
|
4809
|
+
<location offset="59351" length="37"/>
|
4810
4810
|
<text>ura3-52 CKY439 MATalst5-1 sec13-1</text>
|
4811
4811
|
</annotation>
|
4812
4812
|
<annotation id="Team286_A863">
|
4813
4813
|
<infon key="type">Gene</infon>
|
4814
|
-
<location offset="
|
4814
|
+
<location offset="59391" length="5"/>
|
4815
4815
|
<text>SEC13</text>
|
4816
4816
|
</annotation>
|
4817
4817
|
<annotation id="Team286_A864">
|
4818
4818
|
<infon key="type">Gene</infon>
|
4819
|
-
<location offset="
|
4819
|
+
<location offset="59398" length="4"/>
|
4820
4820
|
<text>URA3</text>
|
4821
4821
|
</annotation>
|
4822
4822
|
<annotation id="Team286_A865">
|
4823
4823
|
<infon key="type">Gene</infon>
|
4824
|
-
<location offset="
|
4824
|
+
<location offset="59404" length="23"/>
|
4825
4825
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4826
4826
|
</annotation>
|
4827
4827
|
<annotation id="Team286_A866">
|
4828
4828
|
<infon key="type">Gene</infon>
|
4829
|
-
<location offset="
|
4829
|
+
<location offset="59428" length="3"/>
|
4830
4830
|
<text>112</text>
|
4831
4831
|
</annotation>
|
4832
4832
|
<annotation id="Team286_A867">
|
4833
4833
|
<infon key="type">Gene</infon>
|
4834
|
-
<location offset="
|
4834
|
+
<location offset="59432" length="37"/>
|
4835
4835
|
<text>ura3-52 CKY440 MATalst6-1 sec13-1</text>
|
4836
4836
|
</annotation>
|
4837
4837
|
<annotation id="Team286_A868">
|
4838
4838
|
<infon key="type">Gene</infon>
|
4839
|
-
<location offset="
|
4839
|
+
<location offset="59472" length="5"/>
|
4840
4840
|
<text>SEC13</text>
|
4841
4841
|
</annotation>
|
4842
4842
|
<annotation id="Team286_A869">
|
4843
4843
|
<infon key="type">Gene</infon>
|
4844
|
-
<location offset="
|
4844
|
+
<location offset="59479" length="4"/>
|
4845
4845
|
<text>URA3</text>
|
4846
4846
|
</annotation>
|
4847
4847
|
<annotation id="Team286_A870">
|
4848
4848
|
<infon key="type">Gene</infon>
|
4849
|
-
<location offset="
|
4849
|
+
<location offset="59485" length="23"/>
|
4850
4850
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4851
4851
|
</annotation>
|
4852
4852
|
<annotation id="Team286_A871">
|
4853
4853
|
<infon key="type">Gene</infon>
|
4854
|
-
<location offset="
|
4854
|
+
<location offset="59509" length="3"/>
|
4855
4855
|
<text>112</text>
|
4856
4856
|
</annotation>
|
4857
4857
|
<annotation id="Team286_A872">
|
4858
4858
|
<infon key="type">Gene</infon>
|
4859
|
-
<location offset="
|
4859
|
+
<location offset="59513" length="37"/>
|
4860
4860
|
<text>ura3-52 CKY441 MATalst7-1 sec13-1</text>
|
4861
4861
|
</annotation>
|
4862
4862
|
<annotation id="Team286_A873">
|
4863
4863
|
<infon key="type">Gene</infon>
|
4864
|
-
<location offset="
|
4864
|
+
<location offset="59553" length="5"/>
|
4865
4865
|
<text>SEC13</text>
|
4866
4866
|
</annotation>
|
4867
4867
|
<annotation id="Team286_A874">
|
4868
4868
|
<infon key="type">Gene</infon>
|
4869
|
-
<location offset="
|
4869
|
+
<location offset="59560" length="4"/>
|
4870
4870
|
<text>URA3</text>
|
4871
4871
|
</annotation>
|
4872
4872
|
<annotation id="Team286_A875">
|
4873
4873
|
<infon key="type">Gene</infon>
|
4874
|
-
<location offset="
|
4874
|
+
<location offset="59566" length="23"/>
|
4875
4875
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4876
4876
|
</annotation>
|
4877
4877
|
<annotation id="Team286_A876">
|
4878
4878
|
<infon key="type">Gene</infon>
|
4879
|
-
<location offset="
|
4879
|
+
<location offset="59590" length="3"/>
|
4880
4880
|
<text>112</text>
|
4881
4881
|
</annotation>
|
4882
4882
|
<annotation id="Team286_A877">
|
4883
4883
|
<infon key="type">Gene</infon>
|
4884
|
-
<location offset="
|
4884
|
+
<location offset="59594" length="37"/>
|
4885
4885
|
<text>ura3-52 CKY442 MATalst8-1 sec13-1</text>
|
4886
4886
|
</annotation>
|
4887
4887
|
<annotation id="Team286_A878">
|
4888
4888
|
<infon key="type">Gene</infon>
|
4889
|
-
<location offset="
|
4889
|
+
<location offset="59634" length="5"/>
|
4890
4890
|
<text>SEC13</text>
|
4891
4891
|
</annotation>
|
4892
4892
|
<annotation id="Team286_A879">
|
4893
4893
|
<infon key="type">Gene</infon>
|
4894
|
-
<location offset="
|
4894
|
+
<location offset="59641" length="4"/>
|
4895
4895
|
<text>URA3</text>
|
4896
4896
|
</annotation>
|
4897
4897
|
<annotation id="Team286_A880">
|
4898
4898
|
<infon key="type">Gene</infon>
|
4899
|
-
<location offset="
|
4899
|
+
<location offset="59647" length="23"/>
|
4900
4900
|
<text>ade2-101 ade3-24 leu2-3</text>
|
4901
4901
|
</annotation>
|
4902
4902
|
<annotation id="Team286_A881">
|
4903
4903
|
<infon key="type">Gene</infon>
|
4904
|
-
<location offset="
|
4904
|
+
<location offset="59671" length="3"/>
|
4905
4905
|
<text>112</text>
|
4906
4906
|
</annotation>
|
4907
4907
|
<annotation id="Team286_A882">
|
4908
4908
|
<infon key="type">Gene</infon>
|
4909
|
-
<location offset="
|
4909
|
+
<location offset="59675" length="145"/>
|
4910
4910
|
<text>ura3-52 CKY443 MATa prototroph Kaiser Lab Collection CKY473 MATaleu2-3,112 ura3-52 Gal+ Kaiser Lab Collection CKY534 MATalpha lst1Delta</text>
|
4911
4911
|
</annotation>
|
4912
4912
|
<annotation id="Team286_A883">
|
4913
4913
|
<infon key="type">Gene</infon>
|
4914
|
-
<location offset="
|
4914
|
+
<location offset="59822" length="58"/>
|
4915
4915
|
<text>LEU2 leu2-3,112 ura3-52 [pKR17HA] CKY535 MATalst1Delta</text>
|
4916
4916
|
</annotation>
|
4917
4917
|
<annotation id="Team286_A884">
|
4918
4918
|
<infon key="type">Gene</infon>
|
4919
|
-
<location offset="
|
4919
|
+
<location offset="59882" length="58"/>
|
4920
4920
|
<text>LEU2 leu2-3,112 ura3-52 [pKR17HA] CKY536 MATalst1Delta</text>
|
4921
4921
|
</annotation>
|
4922
4922
|
<annotation id="Team286_A885">
|
4923
4923
|
<infon key="type">Gene</infon>
|
4924
|
-
<location offset="
|
4924
|
+
<location offset="59942" length="129"/>
|
4925
4925
|
<text>LEU2 ura3-52 leu2-3,112 CKY540 MATaleu2-3,112 ura3-52 [pNV31] CKY541 MATasec12-4 ura3-52 [pNV31] CKY542 MATalst1Delta</text>
|
4926
4926
|
</annotation>
|
4927
4927
|
<annotation id="Team286_A886">
|
4928
4928
|
<infon key="type">Gene</infon>
|
4929
|
-
<location offset="
|
4929
|
+
<location offset="60073" length="61"/>
|
4930
4930
|
<text>LEU2 leu2-3,112 ura3-52 [pNV31] CKY552 MATalpha lst1Delta</text>
|
4931
4931
|
</annotation>
|
4932
4932
|
<annotation id="Team286_A887">
|
4933
4933
|
<infon key="type">Gene</infon>
|
4934
|
-
<location offset="
|
4934
|
+
<location offset="60136" length="11"/>
|
4935
4935
|
<text>LEU2 leu2-3</text>
|
4936
4936
|
</annotation>
|
4937
4937
|
<annotation id="Team286_A888">
|
4938
4938
|
<infon key="type">Gene</infon>
|
4939
|
-
<location offset="
|
4939
|
+
<location offset="60148" length="3"/>
|
4940
4940
|
<text>112</text>
|
4941
4941
|
</annotation>
|
4942
4942
|
<annotation id="Team286_A889">
|
4943
4943
|
<infon key="type">Gene</infon>
|
4944
|
-
<location offset="
|
4944
|
+
<location offset="60152" length="7"/>
|
4945
4945
|
<text>ura3-52</text>
|
4946
4946
|
</annotation>
|
4947
4947
|
</passage>
|
@@ -5016,17 +5016,17 @@
|
|
5016
5016
|
<text>Gene Number of alleles LST1 11 LST2 6 LST3 4 LST4 5 LST5 5 LST6 1 LST7 1 LST8 1 LST9 1 LST10 (SEC16) 2</text>
|
5017
5017
|
<annotation id="Team286_A900">
|
5018
5018
|
<infon key="type">Gene</infon>
|
5019
|
-
<location offset="
|
5019
|
+
<location offset="60758" length="14"/>
|
5020
5020
|
<text>LST1 11 LST2</text>
|
5021
5021
|
</annotation>
|
5022
5022
|
<annotation id="Team286_A901">
|
5023
5023
|
<infon key="type">Gene</infon>
|
5024
|
-
<location offset="
|
5024
|
+
<location offset="60778" length="75"/>
|
5025
5025
|
<text>LST3 4 LST4 5 LST5 5 LST6 1 LST7 1 LST8 1 LST9 1 LST10</text>
|
5026
5026
|
</annotation>
|
5027
5027
|
<annotation id="Team286_A902">
|
5028
5028
|
<infon key="type">Gene</infon>
|
5029
|
-
<location offset="
|
5029
|
+
<location offset="60855" length="5"/>
|
5030
5030
|
<text>SEC16</text>
|
5031
5031
|
</annotation>
|
5032
5032
|
</passage>
|
@@ -5041,27 +5041,27 @@
|
|
5041
5041
|
<text>sec13-1 sec16-2 sec23-1 sec31-1 sec17-1 sec18-1 lst1-1 - - - - + + lst2-1 - + + + ND ND lst3-1 - + + + ND ND lst4-1 +/- + + + ND ND lst5-1 - + + + ND ND lst6-1 - +/- - + - + + lst7-1 - + + + ND ND lst8-1 - + + + ND ND</text>
|
5042
5042
|
<annotation id="Team286_A903">
|
5043
5043
|
<infon key="type">Gene</infon>
|
5044
|
-
<location offset="
|
5044
|
+
<location offset="60923" length="76"/>
|
5045
5045
|
<text>sec13-1 sec16-2 sec23-1 sec31-1 sec17-1 sec18-1 lst1-1 - - - - +</text>
|
5046
5046
|
</annotation>
|
5047
5047
|
<annotation id="Team286_A904">
|
5048
5048
|
<infon key="type">Gene</infon>
|
5049
|
-
<location offset="
|
5049
|
+
<location offset="61004" length="22"/>
|
5050
5050
|
<text>lst2-1 - + + + ND</text>
|
5051
5051
|
</annotation>
|
5052
5052
|
<annotation id="Team286_A905">
|
5053
5053
|
<infon key="type">Gene</infon>
|
5054
|
-
<location offset="
|
5054
|
+
<location offset="61032" length="52"/>
|
5055
5055
|
<text>lst3-1 - + + + ND ND lst4-1 +/- + + + ND</text>
|
5056
5056
|
</annotation>
|
5057
5057
|
<annotation id="Team286_A906">
|
5058
5058
|
<infon key="type">Gene</infon>
|
5059
|
-
<location offset="
|
5059
|
+
<location offset="61090" length="53"/>
|
5060
5060
|
<text>lst5-1 - + + + ND ND lst6-1 - +/- - + - +</text>
|
5061
5061
|
</annotation>
|
5062
5062
|
<annotation id="Team286_A907">
|
5063
5063
|
<infon key="type">Gene</infon>
|
5064
|
-
<location offset="
|
5064
|
+
<location offset="61148" length="54"/>
|
5065
5065
|
<text>lst7-1 - + + + ND ND lst8-1 - + + + ND ND</text>
|
5066
5066
|
</annotation>
|
5067
5067
|
</passage>
|
@@ -5101,87 +5101,87 @@
|
|
5101
5101
|
</annotation>
|
5102
5102
|
<annotation id="Team286_A912">
|
5103
5103
|
<infon key="type">Gene</infon>
|
5104
|
-
<location offset="
|
5104
|
+
<location offset="61576" length="17"/>
|
5105
5105
|
<text>lst1Delta mutants</text>
|
5106
5106
|
</annotation>
|
5107
5107
|
<annotation id="Team286_A913">
|
5108
5108
|
<infon key="type">Gene</infon>
|
5109
|
-
<location offset="
|
5109
|
+
<location offset="61662" length="4"/>
|
5110
5110
|
<text>LEU2</text>
|
5111
5111
|
</annotation>
|
5112
5112
|
<annotation id="Team286_A914">
|
5113
5113
|
<infon key="type">Gene</infon>
|
5114
|
-
<location offset="
|
5114
|
+
<location offset="61668" length="6"/>
|
5115
5115
|
<text>CKY534</text>
|
5116
5116
|
</annotation>
|
5117
5117
|
<annotation id="Team286_A915">
|
5118
5118
|
<infon key="type">Gene</infon>
|
5119
|
-
<location offset="
|
5119
|
+
<location offset="61863" length="4"/>
|
5120
5120
|
<text>LEU2</text>
|
5121
5121
|
</annotation>
|
5122
5122
|
<annotation id="Team286_A916">
|
5123
5123
|
<infon key="type">Gene</infon>
|
5124
|
-
<location offset="
|
5124
|
+
<location offset="61920" length="6"/>
|
5125
5125
|
<text>pRS316</text>
|
5126
5126
|
</annotation>
|
5127
5127
|
<annotation id="Team286_A917">
|
5128
5128
|
<infon key="type">Gene</infon>
|
5129
|
-
<location offset="
|
5129
|
+
<location offset="61929" length="4"/>
|
5130
5130
|
<text>LST1</text>
|
5131
5131
|
</annotation>
|
5132
5132
|
<annotation id="Team286_A918">
|
5133
5133
|
<infon key="type">Gene</infon>
|
5134
|
-
<location offset="
|
5134
|
+
<location offset="61960" length="5"/>
|
5135
5135
|
<text>pKR17</text>
|
5136
5136
|
</annotation>
|
5137
5137
|
<annotation id="Team286_A919">
|
5138
5138
|
<infon key="type">Gene</infon>
|
5139
|
-
<location offset="
|
5139
|
+
<location offset="61967" length="5"/>
|
5140
5140
|
<text>SEC24</text>
|
5141
5141
|
</annotation>
|
5142
5142
|
<annotation id="Team286_A920">
|
5143
5143
|
<infon key="type">Gene</infon>
|
5144
|
-
<location offset="
|
5144
|
+
<location offset="62000" length="5"/>
|
5145
5145
|
<text>pAF70</text>
|
5146
5146
|
</annotation>
|
5147
5147
|
<annotation id="Team286_A921">
|
5148
5148
|
<infon key="type">Gene</infon>
|
5149
|
-
<location offset="
|
5149
|
+
<location offset="62010" length="5"/>
|
5150
5150
|
<text>SEC24</text>
|
5151
5151
|
</annotation>
|
5152
5152
|
<annotation id="Team286_A922">
|
5153
5153
|
<infon key="type">Gene</infon>
|
5154
|
-
<location offset="
|
5154
|
+
<location offset="62034" length="5"/>
|
5155
5155
|
<text>pKR34</text>
|
5156
5156
|
</annotation>
|
5157
5157
|
<annotation id="Team286_A923">
|
5158
5158
|
<infon key="type">Gene</infon>
|
5159
|
-
<location offset="
|
5159
|
+
<location offset="62218" length="5"/>
|
5160
5160
|
<text>pGAL1</text>
|
5161
5161
|
</annotation>
|
5162
5162
|
<annotation id="Team286_A924">
|
5163
5163
|
<infon key="type">Gene</infon>
|
5164
|
-
<location offset="
|
5164
|
+
<location offset="62224" length="4"/>
|
5165
5165
|
<text>LST1</text>
|
5166
5166
|
</annotation>
|
5167
5167
|
<annotation id="Team286_A925">
|
5168
5168
|
<infon key="type">Gene</infon>
|
5169
|
-
<location offset="
|
5169
|
+
<location offset="62230" length="5"/>
|
5170
5170
|
<text>pKR35</text>
|
5171
5171
|
</annotation>
|
5172
5172
|
<annotation id="Team286_A926">
|
5173
5173
|
<infon key="type">Gene</infon>
|
5174
|
-
<location offset="
|
5174
|
+
<location offset="62275" length="5"/>
|
5175
5175
|
<text>pKR35</text>
|
5176
5176
|
</annotation>
|
5177
5177
|
<annotation id="Team286_A927">
|
5178
5178
|
<infon key="type">Gene</infon>
|
5179
|
-
<location offset="
|
5179
|
+
<location offset="62285" length="5"/>
|
5180
5180
|
<text>SEC24</text>
|
5181
5181
|
</annotation>
|
5182
5182
|
<annotation id="Team286_A928">
|
5183
5183
|
<infon key="type">Gene</infon>
|
5184
|
-
<location offset="
|
5184
|
+
<location offset="62309" length="5"/>
|
5185
5185
|
<text>pKR41</text>
|
5186
5186
|
</annotation>
|
5187
5187
|
</passage>
|
@@ -5201,32 +5201,32 @@
|
|
5201
5201
|
</annotation>
|
5202
5202
|
<annotation id="Team286_A931">
|
5203
5203
|
<infon key="type">Gene</infon>
|
5204
|
-
<location offset="
|
5204
|
+
<location offset="62801" length="19"/>
|
5205
5205
|
<text>anti-Pma1p antibody</text>
|
5206
5206
|
</annotation>
|
5207
5207
|
<annotation id="Team286_A932">
|
5208
5208
|
<infon key="type">Gene</infon>
|
5209
|
-
<location offset="
|
5209
|
+
<location offset="62990" length="6"/>
|
5210
5210
|
<text>CKY536</text>
|
5211
5211
|
</annotation>
|
5212
5212
|
<annotation id="Team286_A933">
|
5213
5213
|
<infon key="type">Gene</infon>
|
5214
|
-
<location offset="
|
5214
|
+
<location offset="63101" length="18"/>
|
5215
5215
|
<text>LST1 plasmid pKR17</text>
|
5216
5216
|
</annotation>
|
5217
5217
|
<annotation id="Team286_A934">
|
5218
5218
|
<infon key="type">Gene</infon>
|
5219
|
-
<location offset="
|
5219
|
+
<location offset="63168" length="5"/>
|
5220
5220
|
<text>SEC24</text>
|
5221
5221
|
</annotation>
|
5222
5222
|
<annotation id="Team286_A935">
|
5223
5223
|
<infon key="type">Gene</infon>
|
5224
|
-
<location offset="
|
5224
|
+
<location offset="63175" length="6"/>
|
5225
5225
|
<text>CKY536</text>
|
5226
5226
|
</annotation>
|
5227
5227
|
<annotation id="Team286_A936">
|
5228
5228
|
<infon key="type">Gene</infon>
|
5229
|
-
<location offset="
|
5229
|
+
<location offset="63195" length="24"/>
|
5230
5230
|
<text>2mu SEC24 plasmid pKR34</text>
|
5231
5231
|
</annotation>
|
5232
5232
|
</passage>
|
@@ -5246,12 +5246,12 @@
|
|
5246
5246
|
</annotation>
|
5247
5247
|
<annotation id="Team286_A939">
|
5248
5248
|
<infon key="type">Gene</infon>
|
5249
|
-
<location offset="
|
5249
|
+
<location offset="63665" length="9"/>
|
5250
5250
|
<text>lst1Delta</text>
|
5251
5251
|
</annotation>
|
5252
5252
|
<annotation id="Team286_A940">
|
5253
5253
|
<infon key="type">Gene</infon>
|
5254
|
-
<location offset="
|
5254
|
+
<location offset="63677" length="6"/>
|
5255
5255
|
<text>CKY536</text>
|
5256
5256
|
</annotation>
|
5257
5257
|
</passage>
|
@@ -5441,12 +5441,12 @@
|
|
5441
5441
|
</annotation>
|
5442
5442
|
<annotation id="Team286_A974">
|
5443
5443
|
<infon key="type">Gene</infon>
|
5444
|
-
<location offset="
|
5444
|
+
<location offset="66328" length="8"/>
|
5445
5445
|
<text>Lst1p-HA</text>
|
5446
5446
|
</annotation>
|
5447
5447
|
<annotation id="Team286_A975">
|
5448
5448
|
<infon key="type">Gene</infon>
|
5449
|
-
<location offset="
|
5449
|
+
<location offset="66387" length="16"/>
|
5450
5450
|
<text>anti-HA antibody</text>
|
5451
5451
|
</annotation>
|
5452
5452
|
</passage>
|
@@ -5466,7 +5466,7 @@
|
|
5466
5466
|
</annotation>
|
5467
5467
|
<annotation id="TEAM_336_PPI15">
|
5468
5468
|
<infon key="type">PPImention</infon>
|
5469
|
-
<location offset="66406" length="45"/>
|
5469
|
+
<location offset="66406" length="45" original_offset="0"/>
|
5470
5470
|
<text>Two-Hybrid Interaction between LST1 and SEC23</text>
|
5471
5471
|
</annotation>
|
5472
5472
|
</passage>
|
@@ -5476,17 +5476,17 @@
|
|
5476
5476
|
<text>beta-galactosidase activity LST1 SEC24 No fusion SEC23 395 +- 8 629 +- 1 24.4 +- 0.1 No fusion 30.4 +- 4.0 25.3 +- 1.4 44.8 +- 5.3</text>
|
5477
5477
|
<annotation id="Team286_A978">
|
5478
5478
|
<infon key="type">Gene</infon>
|
5479
|
-
<location offset="
|
5479
|
+
<location offset="66458" length="18"/>
|
5480
5480
|
<text>beta-galactosidase</text>
|
5481
5481
|
</annotation>
|
5482
5482
|
<annotation id="Team286_A979">
|
5483
5483
|
<infon key="type">Gene</infon>
|
5484
|
-
<location offset="
|
5484
|
+
<location offset="66487" length="4"/>
|
5485
5485
|
<text>LST1</text>
|
5486
5486
|
</annotation>
|
5487
5487
|
<annotation id="Team286_A980">
|
5488
5488
|
<infon key="type">Gene</infon>
|
5489
|
-
<location offset="
|
5489
|
+
<location offset="66493" length="5"/>
|
5490
5490
|
<text>SEC24</text>
|
5491
5491
|
</annotation>
|
5492
5492
|
</passage>
|
@@ -5601,7 +5601,7 @@
|
|
5601
5601
|
</annotation>
|
5602
5602
|
<annotation id="TEAM_336_PPI16">
|
5603
5603
|
<infon key="type">PPImention</infon>
|
5604
|
-
<location offset="66859" length="97"/>
|
5604
|
+
<location offset="66859" length="97" original_offset="0"/>
|
5605
5605
|
<text>Lst1p/-Sec23p complex is membrane associated. (A) Affinity isolation of Lst1p/-Sec23p complexes.</text>
|
5606
5606
|
</annotation>
|
5607
5607
|
</passage>
|
@@ -5883,7 +5883,7 @@
|
|
5883
5883
|
<text>Yeast SEC16gene encodes a multidomain vesicle coat protein that interacts with Sec23p</text>
|
5884
5884
|
<annotation id="TEAM_336_PPI17">
|
5885
5885
|
<infon key="type">PPImention</infon>
|
5886
|
-
<location offset="69406" length="85"/>
|
5886
|
+
<location offset="69406" length="85" original_offset="0"/>
|
5887
5887
|
<text>Yeast SEC16gene encodes a multidomain vesicle coat protein that interacts with Sec23p</text>
|
5888
5888
|
</annotation>
|
5889
5889
|
</passage>
|
@@ -5907,7 +5907,7 @@
|
|
5907
5907
|
<text>SED4encodes a yeast endoplasmic reticulum protein that binds Sec16p and participates in vesicle formation</text>
|
5908
5908
|
<annotation id="TEAM_336_PPI18">
|
5909
5909
|
<infon key="type">PPImention</infon>
|
5910
|
-
<location offset="69493" length="105"/>
|
5910
|
+
<location offset="69493" length="105" original_offset="0"/>
|
5911
5911
|
<text>SED4encodes a yeast endoplasmic reticulum protein that binds Sec16p and participates in vesicle formation</text>
|
5912
5912
|
</annotation>
|
5913
5913
|
</passage>
|
@@ -5925,7 +5925,7 @@
|
|
5925
5925
|
<text>COPII coat subunit interactions: Sec24p and Sec23p bind to adjacent regions of Sec16p</text>
|
5926
5926
|
<annotation id="TEAM_336_PPI19">
|
5927
5927
|
<infon key="type">PPImention</infon>
|
5928
|
-
<location offset="69599" length="85"/>
|
5928
|
+
<location offset="69599" length="85" original_offset="0"/>
|
5929
5929
|
<text>COPII coat subunit interactions: Sec24p and Sec23p bind to adjacent regions of Sec16p</text>
|
5930
5930
|
</annotation>
|
5931
5931
|
</passage>
|
@@ -5958,7 +5958,7 @@
|
|
5958
5958
|
<text>Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2</text>
|
5959
5959
|
<annotation id="TEAM_336_PPI20">
|
5960
5960
|
<infon key="type">PPImention</infon>
|
5961
|
-
<location offset="69735" length="74"/>
|
5961
|
+
<location offset="69735" length="74" original_offset="0"/>
|
5962
5962
|
<text>Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2</text>
|
5963
5963
|
</annotation>
|
5964
5964
|
</passage>
|