simple_bioc 0.0.13 → 0.0.14

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: db44fee4f6e45f654411f55a3a5bf56794e439e7
-  data.tar.gz: c407b58528e2e24a3720f922d671bd5f953b02de
+  metadata.gz: f3565e9999d3ad565e7d0947be96a83ef9069d20
+  data.tar.gz: 2d90c77f61f8b663fd043b83765a2c453744bc9b
 SHA512:
-  metadata.gz: f05837f3817efed20bb56e81cc7781d224d7246ca405157d02aabe2193b50163d7e8c7190e0dfa50a53a28908614659415883b8d4569ac06eb27d1cd36077a3a
-  data.tar.gz: d300ea89b5a31bac10a42f11a16e22d54c188b2a9f9798354a55b781c74920cf9f80a3d2b5c64a161c9abb2d9c179dcc5d28eb354c505dc4579927b3c1d072fe
+  metadata.gz: f32b5ca53162b8b2a176ab7651f73825e0d4c96da35ee57e4c0897842fe0495dd75465866406828caad04b2566a6c86a1179b107340d2473b05372211dda4aa1
+  data.tar.gz: 4e958b4558ad07fad0449b3b96b818528fc23fa1d1518e32682ea9945eff66669dd4752ab7fa4f873bbd587349bc2049f63512f2829975fe63ada76ae9a5bc92

data/lib/simple_bioc/location.rb

@@ -1,6 +1,6 @@
 module SimpleBioC
   class Location
-    attr_accessor :offset, :length
+    attr_accessor :offset, :original_offset, :length
     attr_reader :annotation
 
     def initialize(parent)

data/lib/simple_bioc/location_adjuster.rb

@@ -6,6 +6,7 @@ module SimpleBioC
       obj.annotations.each do |a|
         positions = find_all_locations(obj, a.text)
         a.locations.each do |l|
+          l.original_offset = l.offset
           l.offset = choose_offset_candidate(l.offset, positions)
         end
       end

data/lib/simple_bioc/version.rb

@@ -1,3 +1,3 @@
 module SimpleBioC
-  VERSION = "0.0.13"
+  VERSION = "0.0.14"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: simple_bioc
 version: !ruby/object:Gem::Version
-  version: 0.0.13
+  version: 0.0.14
 platform: ruby
 authors:
 - Dongseop Kwon
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-01-28 00:00:00.000000000 Z
+date: 2016-01-29 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: nokogiri