shalmaneser 1.2.0.rc1 → 1.2.0.rc2
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- checksums.yaml +4 -4
- data/README.md +26 -8
- data/doc/SB_README +57 -0
- data/doc/exp_files_description.txt +160 -0
- data/doc/fred.pdf +0 -0
- data/doc/index.md +120 -0
- data/doc/salsa_tool.pdf +0 -0
- data/doc/salsatigerxml.pdf +0 -0
- data/doc/shal_doc.pdf +0 -0
- data/doc/shal_lrec.pdf +0 -0
- data/lib/ext/maxent/Classify.class +0 -0
- data/lib/ext/maxent/Train.class +0 -0
- data/lib/frprep/TreetaggerInterface.rb +4 -4
- data/lib/shalmaneser/version.rb +1 -1
- metadata +41 -48
- data/test/frprep/test_opt_parser.rb +0 -94
- data/test/functional/functional_test_helper.rb +0 -40
- data/test/functional/sample_experiment_files/fred_test.salsa.erb +0 -122
- data/test/functional/sample_experiment_files/fred_train.salsa.erb +0 -135
- data/test/functional/sample_experiment_files/prp_test.salsa.erb +0 -138
- data/test/functional/sample_experiment_files/prp_test.salsa.fred.standalone.erb +0 -120
- data/test/functional/sample_experiment_files/prp_test.salsa.rosy.standalone.erb +0 -120
- data/test/functional/sample_experiment_files/prp_train.salsa.erb +0 -138
- data/test/functional/sample_experiment_files/prp_train.salsa.fred.standalone.erb +0 -138
- data/test/functional/sample_experiment_files/prp_train.salsa.rosy.standalone.erb +0 -138
- data/test/functional/sample_experiment_files/rosy_test.salsa.erb +0 -257
- data/test/functional/sample_experiment_files/rosy_train.salsa.erb +0 -259
- data/test/functional/test_fred.rb +0 -47
- data/test/functional/test_frprep.rb +0 -52
- data/test/functional/test_rosy.rb +0 -40
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#################################################
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# This is a sample experiment file
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# with explanations of all features
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# that can be set for the ROSY system.
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#
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# To start your own experiment,
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# replace all occurrences of
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# %SOMETHING% or %PATH% or %PARAMETERS%
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# by values of your choice.
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#
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# Experiment file lines that start with '#'
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# are comments and are ignored. Empty lines are ignored as well.
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########################
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# Experiment description
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#
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##
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# Experiment ID:
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# Uniquely identifies files and database tables
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# of this experiment.
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# The experiment ID is a word (no spaces) of
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# letters in [A-Za-z_].
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experiment_ID = rosy_train
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# Enduser mode?
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# The idea is that the enduser will only _apply_
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# pre-trained classifiers. So in enduser mode many
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# options are disallowed.
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enduser_mode = false
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# directories
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# - data directory: where Rosy puts its internal data
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# - input directory:
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# where Rosy reads its input SalsaTigerXML data.
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# One directory each for the training and the test data
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# - output directory:
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# where Rosy writes its output SalsaTigerXML data:
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# same frames as in the input data, but frame elements newly
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# assigned.
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# If no output directory is given, output is to
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# <data_dir>/<experiment_ID>/output/
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# - classifier_dir: If present, this is where trained classifiers
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# are written.
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# Otherwise they are written to <data_dir>/<experiment_id>/classif_dir
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data_dir = <%= File.expand_path('test/functional/output') %>
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directory_input_train = <%= File.expand_path('test/functional/input/rosy/train.salsa') %>
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#directory_input_test = <%= File.expand_path('test/functional/output/exp_fred_salsa/output/stxml') %>
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#directory_output = <%= File.expand_path('test/functional/output/exp_rosy_salsa/output') %>
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##
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# Preprocessing settings:
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# frprep experiment files for training and test data.
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preproc_descr_file_train = <%= File.expand_path('test/functional/sample_experiment_files/prp_train.salsa.rosy.standalone') %>
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#preproc_descr_file_test = <%= File.expand_path('test/functional/sample_experiment_files/prp_test.salsa') %>
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########################
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# features
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#
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# Please specify all features that you would like
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# Rosy to compute.
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# Note: The system distinguishes between features to be
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# computed and features to be included in the model,
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# so you can compute features once and then vary features
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# included in the model.
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#
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# Format for each feature specification:
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# feature = <feature_name> [dontuse | argrec | arglab | onestep]
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#
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# dontuse: the feature is computed but not included in the model.
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# argrec, arglab, onestep: the feature is used only in this
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# processing step
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#
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#
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# The set of features computed must stay the same throughout
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# an experiment (or the match of experiment file and
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# database table will fail), but the set of features included
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# in the model can be varied.
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#
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# See below for a list of all features currently available in the system.
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feature = pt_path
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feature = gf_path
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feature = path
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feature = path_length
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feature = pt_combined_path
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feature = gf_combined_path
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feature = combined_path
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feature = pt_partial_path
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feature = gf_partial_path
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feature = partial_path
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feature = pt_gvpath
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feature = gf_gvpath
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feature = gvpath
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feature = ancestor_rule
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feature = relpos
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feature = pt
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feature = gf
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feature = father_pt
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feature = frame
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feature = target
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feature = target_pos
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feature = target_voice
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feature = gov_verb
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feature = prep
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feature = const_head
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feature = const_head_pos
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feature = icont_word
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feature = firstword
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feature = lastword
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feature = leftsib
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feature = rightsib
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feature = worddistance
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feature = ismaxproj
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feature = nearest_node
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feature = prune
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########################
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# classifiers
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#
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# Please specify each classifier type you want to use.
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# If you specify more than one classifier, classifier combination
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# is used.
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#
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# Format for each classifier specification:
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# classifier = <classifier_name> <path> [<parameters>]
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#
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# Possible values for <classifier_name> at the moment:
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# timbl (memory-based learning),
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# maxent (openlp maxent system)
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#
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# Samples:
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# classifier = timbl /prog/MachineLearning/Timbl5/
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# classifier = maxent /prog/maxent-2.4.0 /prog/shalmaneser/program/tools/maxent
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classifier = maxent <%= File.expand_path('tools/maxent/maxent-2.4.0') %>
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########################
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# further settings
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# Pruning: Identify constituents that are very unlikely
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# to instantiate a semantic role, and prune them prior
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# to the training/application of classifiers?
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#
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# Pruning methods available at the moment:
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# prune: Xue/Palmer EMNLP 2004, adapted to fit each individual parser
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#
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# To enable pruning, set "prune" to the pruning method of your choice,
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# and also compute the feature of the same name -- see
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# feature list below.
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# To disable pruning, comment out the next line.
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prune = prune
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# verbose mode
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verbose = true
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# data adaptation:
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# correct training labels to
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# match syntax better?
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fe_syn_repair = true
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fe_rel_repair = false
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# xwise: For each classification step (argrec, arglab, onestep)
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# you can set the granularity of training:
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# - by frame (frame)
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# - by target part of speech or (target_pos)
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# - by target lemma. (target)
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#
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# these three settings can be combined, e.g.
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# xwise_argrec = target_pos frame
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# to train argrec frame-wise and split each frame by target POS.
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#
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# If no value is given for xwise_<step>, the default is "frame".
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xwise_argrec = frame
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xwise_arglab = frame
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xwise_onestep = frame
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# assume_argrec_perfect: by default, this is false.
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#
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# Set this to true
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# to perform the arglab (argument labeling) step
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# on all instances that actually are FEs
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# rather than on all instances that the argrec step
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# has judged to be FEs.
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assume_argrec_perfect = false
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# split_nones: set to true
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# to split the NONE target class into:
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# NONE left of target,
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# NONE right of target
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# because the NONE class has so many more instances
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# than any other.
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split_nones = true
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# print_eval_log: set to true to print individual correctness
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# judgments for each instance evaluated
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print_eval_log = true
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# External data source:
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#
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# Rosy can integrate data computed by additional systems
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# provided that they all use a common experiment file
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# for external data to determine where they put their data.
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# Rosy needs the path to that experiment file.
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#
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# (May be left unset when no external data is used)
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#external_descr_file = %PATH%
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########################
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# rosy internal data - please don't change
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# Database access:
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# dbtype: type of database, either mysql
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# for a MySQL server, or sqlite for SQLite.
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#
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# if dbtype == mysql, set access parameters:
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# host: database server
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# user: user name to use
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# passwd: password for user
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# dbname: database where all Rosy's tables will be stored
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dbtype = mysql
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host = localhost
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user = shalm
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passwd = 12345
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dbname = shalm11
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# classifier output columns in the tables all start
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# with this prefix
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classif_column_name = classif
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# pattern for constructing the names
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# of the DB tables with training data (main_table_name)
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# and test data (test_table_name)
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main_table_name = rosy_<exp_ID>_main
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test_table_name = rosy_<exp_ID>_<test_ID>
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# string to use for "no value for this feature"
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# as well as "no FE for this instance"
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noval = NONE
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# pattern for constructing the names
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# of classifier files and classifier output files
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classifier_file = classif.<classif>.<group>
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classifier_output_file = classout.<classif>.<group>.<dataset>
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# pattern for constructing the names
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# of the evaluation file and the evaluation log file
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eval_file = eval.<exp_ID>.<step>.<test_ID>
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log_file = eval_log.<exp_ID>.<step>.<test_ID>
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# pattern for constructing the names
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# of the files with failed parses
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failed_file = parsefail.<exp_ID>.<split_ID>.<dataset>
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# -*- encoding: utf-8 -*-
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require 'test/unit'
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require 'functional/functional_test_helper'
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class TestFred < Test::Unit::TestCase
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include FunctionalTestHelper
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def setup
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@msg = "Fred is doing bad, you've just broken something!"
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@test_file = FRED_TEST_FILE
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@train_file = FRED_TRAIN_FILE
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end
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def test_fred_testing_featurization
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create_exp_file(@test_file)
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create_exp_file(PRP_TEST_FILE_FRED_STD)
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execute("ruby -I lib bin/fred -t featurize -e #{@test_file} -d test")
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remove_exp_file(@test_file)
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remove_exp_file(PRP_TEST_FILE_FRED_STD)
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end
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def test_fred_testing_tests
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create_exp_file(@test_file)
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create_exp_file(PRP_TEST_FILE_FRED_STD)
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execute("ruby -I lib bin/fred -t test -e #{@test_file}")
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remove_exp_file(@test_file)
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remove_exp_file(PRP_TEST_FILE_FRED_STD)
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end
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def test_fred_training_featurization
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create_exp_file(@train_file)
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create_exp_file(PRP_TRAIN_FILE_FRED_STD)
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execute("ruby -I lib bin/fred -t featurize -e #{@train_file} -d train")
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remove_exp_file(@train_file)
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remove_exp_file(PRP_TRAIN_FILE_FRED_STD)
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end
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def test_fred_training_train
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create_exp_file(@train_file)
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create_exp_file(PRP_TRAIN_FILE_FRED_STD)
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execute("ruby -I lib bin/fred -t train -e #{@train_file}")
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remove_exp_file(@train_file)
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remove_exp_file(PRP_TRAIN_FILE_FRED_STD)
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end
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end
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# -*- encoding: utf-8 -*-
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require 'test/unit'
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require 'functional/functional_test_helper'
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#require 'fileutils' # File.delete(), File.rename(), File.symlink()
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class TestFrprep < Test::Unit::TestCase
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include FunctionalTestHelper
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def setup
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@msg = "FrPrep is doing bad, you've just broken something!"
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@test_file = PRP_TEST_FILE
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@train_file = PRP_TRAIN_FILE
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@ptb = 'lib/frprep/interfaces/berkeley_interface.rb'
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link_berkeley
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end
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def teardown
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unlink_berkeley
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end
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def test_frprep_testing
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create_exp_file(@test_file)
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execute("ruby -I lib bin/frprep -e #{@test_file}")
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remove_exp_file(@test_file)
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end
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def test_frprep_training
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create_exp_file(@train_file)
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execute("ruby -I lib bin/frprep -e #{@train_file}")
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remove_exp_file(@train_file)
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end
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private
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# Berkeley Parser takes a long time which is bad for testing.
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# We ran it once and reuse the result file in our tests.
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# Before every test we link the Berkeley interface to a stub
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# with the BP invocation switched off.
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def link_berkeley
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File.rename(@ptb, "#{@ptb}.bak")
|
41
|
-
File.symlink(
|
42
|
-
File.expand_path('test/functional/berkeley_interface.rb.stub'),
|
43
|
-
File.expand_path(@ptb)
|
44
|
-
)
|
45
|
-
end
|
46
|
-
|
47
|
-
# After testing we bring the right interface back, the program remains intact.
|
48
|
-
def unlink_berkeley
|
49
|
-
File.delete(@ptb)
|
50
|
-
File.rename("#{@ptb}.bak", @ptb)
|
51
|
-
end
|
52
|
-
end
|
@@ -1,40 +0,0 @@
|
|
1
|
-
# -*- encoding: utf-8 -*-
|
2
|
-
|
3
|
-
require 'test/unit'
|
4
|
-
require 'functional/functional_test_helper'
|
5
|
-
|
6
|
-
class TestRosy < Test::Unit::TestCase
|
7
|
-
include FunctionalTestHelper
|
8
|
-
|
9
|
-
def setup
|
10
|
-
@msg = "Rosy is doing bad, you've just broken something!"
|
11
|
-
end
|
12
|
-
|
13
|
-
def test_rosy_testing
|
14
|
-
create_exp_file(ROSY_TEST_FILE)
|
15
|
-
create_exp_file(PRP_TEST_FILE_ROSY_STD)
|
16
|
-
execute("ruby -rubygems -I lib bin/rosy -t featurize -e #{ROSY_TEST_FILE} -d test")
|
17
|
-
execute("ruby -rubygems -I lib bin/rosy -t test -e #{ROSY_TEST_FILE}")
|
18
|
-
remove_exp_file(ROSY_TEST_FILE)
|
19
|
-
remove_exp_file(PRP_TEST_FILE_ROSY_STD)
|
20
|
-
end
|
21
|
-
|
22
|
-
def test_rosy_training
|
23
|
-
create_exp_file(ROSY_TRAIN_FILE)
|
24
|
-
create_exp_file(PRP_TRAIN_FILE_ROSY_STD)
|
25
|
-
execute("ruby -rubygems -I lib bin/rosy -t featurize -e #{ROSY_TRAIN_FILE} -d train")
|
26
|
-
execute("ruby -rubygems -I lib bin/rosy -t train -e #{ROSY_TRAIN_FILE} -s argrec")
|
27
|
-
execute("ruby -rubygems -I lib bin/rosy -t train -e #{ROSY_TRAIN_FILE} -s arglab")
|
28
|
-
remove_exp_file(ROSY_TRAIN_FILE)
|
29
|
-
remove_exp_file(PRP_TRAIN_FILE_ROSY_STD)
|
30
|
-
end
|
31
|
-
|
32
|
-
def test_rosy_training_onestep
|
33
|
-
create_exp_file(ROSY_TRAIN_FILE)
|
34
|
-
create_exp_file(PRP_TRAIN_FILE_ROSY_STD)
|
35
|
-
execute("ruby -rubygems -I lib bin/rosy -t featurize -e #{ROSY_TRAIN_FILE} -d train")
|
36
|
-
execute("ruby -rubygems -I lib bin/rosy -t train -e #{ROSY_TRAIN_FILE} -s onestep")
|
37
|
-
remove_exp_file(ROSY_TRAIN_FILE)
|
38
|
-
remove_exp_file(PRP_TRAIN_FILE_ROSY_STD)
|
39
|
-
end
|
40
|
-
end
|