sequenceserver 3.1.2 → 3.2.0

data/public/css/sequenceserver.css

@@ -1,527 +0,0 @@
-/**********************
- * Override Bootstrap *
- **********************/
-
-@import url('../vendor/github/nicgirault/circosJs@1.7.0/dist/colorBrewer.css');
-@import url('../vendor/github/twbs/bootstrap@3.3.5/css/bootstrap.min.css');
-@import url('../vendor/npm/font-awesome@4.4.0/css/font-awesome.min.css');
-@import url('grapher.css');
-@import url('fonts.css');
-
-/**
- * For scrollspy, etc.
- */
-body {
-  font-family: "Source Sans Pro", "Helvetica Neue", Helvetica, Arial, sans-serif;
-  position: relative;
-  color: black;
-}
-
-/**
- * No underlines on links, ever
- */
-a:hover,
-.btn-link:hover {
-  text-decoration: none;
-  color: #c74f14;
-}
-
-a {
-  color: #1b557a;
-}
-
-label:hover {
-  color: #c74f14;
-}
-
-.yellow-background {
-  background-color: #e2d382;
-}
-
-/**
- * Disable resize grabber on textarea.
- */
-textarea {
-  resize: vertical;
-  min-height: 214px;
-}
-
-hr {
-  border-top: transparent;
-}
-
-/**
- * Use normal font weight for labels and indicate they are clickable by setting
- * `cursor: pointer`.
- */
-label {
-  cursor: pointer;
-  margin-bottom: 0;
-  font-weight: normal;
-  color: #1b557a;
-}
-
-small {
-  color: inherit !important;
-}
-
-h3 {
-  font-size: 16px;
-}
-
-h4 {
-  font-size: 14px;
-}
-
-h3 > .fa,
-h4 > .fa {
-  vertical-align: bottom;
-}
-
-/**
- * Without this .disabled elements hardly look disabled.
- */
-.disabled {
-  color: #ccc !important;
-  cursor: not-allowed;
-  pointer-events: none; /* This prevents the click from happening */
-}
-
-a.disabled:hover,
-.btn-link[disabled]:hover {
-  color: #ccc;
-  cursor: not-allowed;
-}
-
-/**
- * Increase font size, add border, make place for subtext to app name.
- */
-.navbar {
-  margin-bottom: 0;
-  border-radius: 0;
-  border-bottom: 1px solid #c74f14;
-}
-
-.navbar-brand {
-  height: auto;
-  padding: 10px 7.5px;
-  font-size: 32px;
-  color: rgb(51, 51, 51);
-}
-
-.navbar-brand > small {
-  font-size: 50%;
-  vertical-align: text-bottom;
-}
-
-.navbar-nav > li > a {
-  padding: 10px 7.5px;
-  font-size: 14px;
-  color: #174465;
-}
-
-/* logo */
-.navbar-brand > img {
-  display: inline-block;
-}
-
-/**
- * Like BS' .page-header but without extra margin and the ability to display a
- * sub-text on right.
- */
-
-/* Hit header styling */
-.section-header {
-  border-bottom: 1px solid  #c74f14;
-  padding-left: 1px;
-  display: table;
-  width: 100%;
-}
-
-.section-header-sidebar {
-  padding-left: 1px;
-  display: table;
-  width: 100%;
-}
-
-.section-header-sidebar > h4 {
-  font-weight: bold;
-  margin-bottom: 0;
-}
-
-.section-header > * {
-  display: table-cell;
-}
-
-.section-header > *:first-child {
-  width: 100%;
-}
-
-.section-content {
-  padding: 0 0 0 1px;
-}
-
-/**
- * Take padding-right out of .control-label and keep padding of .input-group.
- * Works better when browser is resized to smaller width.
- */
-.control-label[class*="col-"] {
-  padding-right: 0;
-}
-
-.input-group[class*="col-"] {
-  padding-left: 15px;
-  padding-right: 15px;
-}
-
-/**
- * Take out border from each row and apply only to table header.
- */
-.table {
-  margin-bottom: 0;
-}
-
-.table > thead > tr > th,
-.table > tbody > tr > th,
-.table > tfoot > tr > th,
-.table > thead > tr > td,
-.table > tbody > tr > td,
-.table > tfoot > tr > td {
-  border-top: none;
-  font-weight: normal;
-  padding: 0 0 0 4px;
-}
-
-.table > thead > tr > th {
-  border-bottom: none;
-  color: #5f5f5f;
-}
-
-.clamped-paragraph {
-  -webkit-line-clamp: 2;
-  -webkit-box-orient: vertical;
-  display: -webkit-box;
-  overflow: hidden;
-  text-overflow: ellipsis;
-  overflow-wrap: break-word;
-}
-
-/**
- * Set max-width and font-family on tooltips.
- */
-.tooltip-inner {
-  max-width: 350px;
-  font-family: "Source sans pro", "Helvetica Neue", Helvetica, Arial, sans-serif;
-}
-
-/********************
- * Extend Bootstrap *
- ********************/
-
-/**
- * Capitalize text.
- */
-.text-capitalize {
-  text-transform: capitalize;
-}
-
-/**
- * Uppercase text.
- */
-.text-uppercase {
-  text-transform: uppercase;
-}
-
-/**
- * Use monospace font.
- */
-.text-monospace {
-  font-family:
-    "SFMono-Regular",
-    Consolas,
-    "Liberation Mono",
-    Menlo,
-    Courier,
-    monospace;
-  font-size: 12px;
-}
-
-/**
- * Make text bold.
- */
-.text-bold {
-  font-weight: bold;
-}
-
-/**
- * Set cursor: pointer on the given element.
- */
-.cursor-pointer {
-  cursor: pointer;
-}
-
-/**
- * Do not wrap text or show horizontal scrollbar if text overflows the width of
- * the element. Show ellipsis instead.
- */
-td.nowrap-ellipsis {
-  max-width: 0; /* https://stackoverflow.com/a/11877033 */
-  overflow-x: hidden;
-  white-space: nowrap;
-  text-overflow: ellipsis;
-}
-
-/**
- * Helpers to override :hover and .active on .nav elements.
- */
-.nav.hover-reset > li > a:hover {
-  background-color: inherit;
-  color: #c74f14;
-}
-
-.nav.focus-reset > li > a:focus {
-  background-color: inherit;
-  color: #c74f14;
-}
-
-.nav.active-bold > .active > a {
-  font-weight: bold;
-  color: #c74f14;
-}
-
-/**
- * Use with .label class to use the foreground color defined by parent element.
- */
-.label-reset {
-  color: inherit;
-  line-height: inherit;
-  font-weight: normal;
-  font-size: inherit;
-}
-
-.pos-label {
-  padding: 0 0 0 0.6em;
-}
-
-/**
- * Reset Bootstrap's CSS for pre tags.
- */
-.pre-reset {
-  margin: 0 0;
-  border: none;
-  padding: 0;
-  border-radius: 0;
-  background-color: inherit;
-  white-space: pre-wrap;
-  word-break: keep-all;
-}
-
-/***************************
- * SequenceServer specific *
- ***************************/
-.nojs-error {
-  margin-top: 10px;
-  padding: 10px;
-  color: white;
-  background-color: red;
-}
-
-.modal-error {
-  color: red;
-  font-size: 18px;
-  border: 1px solid red;
-  padding: 0.5em;
-  margin-top: 0.5em;
-  margin-bottom: 0.5em;
-}
-
-.biojs-vis-sequence pre {
-  margin: 0 0;
-  border: none;
-  padding: 0;
-  border-radius: 0;
-  background-color: inherit;
-}
-
-/**********************
-        Sidebar
- **********************/
-.sidebar > div {
-  /* To line up with the results on the right */
-  margin-top: 0;
-}
-
-.sidebar li a,
-.sidebar li button {
-  padding: 3px 2px;
-}
-
-.sidebar .nowrap-ellipsis {
-  text-overflow: ellipsis;
-  overflow: hidden;
-  white-space: nowrap;
-}
-
-.sidebar.affix {
-  margin-top: 0;
-  top: 0;
-}
-
-@media (min-width: 992px) {
-  /* MacBook Pro etc. */
-  .sidebar.affix {
-    width: 212.5px;
-  }
-}
-
-@media (min-width: 1200px) {
-  /* iMac etc. */
-  .sidebar.affix {
-    width: 262.5px;
-  }
-}
-
-/* Result per query. */
-.overview {
-  /* To line up with the sidebar on the left */
-  margin: 10px 0 6px 0;
-}
-
-.overview p {
-  margin: 0;
-}
-
-.resultn {
-  margin-top: 6px;
-}
-
-.graphical-overview {
-  font-size: 12px;
-  text-align: center;
-}
-
-.graphical-overview .btn {
-  padding-top: 0;
-  padding-bottom: 0;
-}
-
-.hit {
-  margin-top: 4px;
-}
-
-.hit .section-header h4 {
-  cursor: pointer;
-  padding-left: 1px;
-}
-
-.hit .section-header h4 span,
-.hit .section-header h4 strong {
-  cursor: text;
-}
-
-.hit-links {
-  height: 16px;
-}
-
-.hsp {
-  padding: 1px 0 20px 2px;
-}
-
-.hsp-stats {
-  font-size: 13px;
-  letter-spacing: 0.7px;
-  color: #5f5f5f;
-  font-weight: 600;
-}
-
-.hsp-lines {
-  margin-top: 5px;
-  font-size: 11px;
-  letter-spacing: 1.2px;
-}
-
-.hsp-coords {
-  color: #5f5f5f;
-}
-
-.btn-link {
-  border: none;
-  padding: 0;
-  color: #1b557a;
-}
-
-.fastan > .section-header {
-  padding-bottom: 8px;
-}
-
-.fastan > .section-content {
-  padding-top: 8px;
-  padding-left: 0;
-}
-
-.footer a:first-child {
-  vertical-align: super;
-}
-
-/* higlight when hit is selected */
-.glow {
-  border-left: 2px solid #c74f14;
-}
-
-.downloads a {
-  cursor: pointer;
-}
-
-.sharing-panel a {
-  cursor: pointer;
-}
-
-/* CSS class for logo */
-.logo {
-  width: 205.05px;
-  max-height: 35px;
-}
-
-/* CSS class for vertical line separating the hit links */
-.line {
-  color: #c74f14;
-  margin: 0 5px 0 5px;
-}
-
-/* override bootstrap focus color in the text field of the search page */
-.form-control:focus {
-  border-color: #1b557a;
-}
-
-/* override bootstrap btn-color for the search "BlAST" button on the search page. */
-.btn-primary {
-  background-color: #1b557a;
-  border-color: #174465;
-}
-
-.btn-primary:hover {
-  background-color: #174465;
-  border-color: #174465;
-}
-
-.btn-primary:disabled,
-.btn-primary[disabled]:hover {
-  background-color: #881c14;
-  border-color: #881c14;
-}
-
-/* CSS class to facilitate the hit header wrapping */
-.hit-header {
-  display: table-cell;
-}
-
-.share-url-component input[type="text"] {
-  width: 100%;
-}
-
-.share-url-component .actions {
-  padding-top: 1em;
-  padding-bottom: 1em;
-  display: flex;
-  justify-content: space-between;
-}