semtools 0.1.2 → 0.1.8

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@@ -92,7 +92,7 @@ end
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  # +charsToRemove+:: char (or chars set) to be removed from texts to be compared
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  # +unique+:: boolean flag which indicates if repeated elements must be removed
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  # Returns the similarity percentage for all elements into array
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- def similitude_network(items_array, splitChar = ";", charsToRemove = "", unique = false)
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+ def similitude_network(items_array, splitChar: ";", charsToRemove: "", unique: false)
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  # Special cases
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  return nil if items_array.nil?
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  return nil if !items_array.is_a? Array
@@ -1,3 +1,3 @@
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  module Semtools
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- VERSION = "0.1.2"
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+ VERSION = "0.1.8"
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  end
data/lib/semtools.rb CHANGED
@@ -1,6 +1,5 @@
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  require "semtools/version"
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  require "semtools/sim_handler"
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- require "semtools/math_methods"
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  require "semtools/ontology"
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  module Semtools
data/semtools.gemspec CHANGED
@@ -31,7 +31,10 @@ Gem::Specification.new do |spec|
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  spec.require_paths = ["lib"]
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  spec.add_dependency "text"
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+ spec.add_dependency "down"
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+ spec.add_dependency "expcalc"
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  spec.add_development_dependency "rake"
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  spec.add_development_dependency "rspec"
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+ spec.add_runtime_dependency 'colorize', '>= 0.7.3'
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  end
metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: semtools
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  version: !ruby/object:Gem::Version
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- version: 0.1.2
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+ version: 0.1.8
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  platform: ruby
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  authors:
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  - seoanezonjic
@@ -9,7 +9,7 @@ authors:
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2021-03-17 00:00:00.000000000 Z
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+ date: 2022-03-10 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: text
@@ -25,6 +25,34 @@ dependencies:
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  - - ">="
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  - !ruby/object:Gem::Version
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  version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: down
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: expcalc
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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  - !ruby/object:Gem::Dependency
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  name: rake
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  requirement: !ruby/object:Gem::Requirement
@@ -53,6 +81,20 @@ dependencies:
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  - - ">="
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  - !ruby/object:Gem::Version
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  version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: colorize
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: 0.7.3
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: 0.7.3
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  description: This gem allows to perform ontology based operations and calculation
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  of Semantic similarity and information coefficient using different implementations.
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  email:
@@ -61,6 +103,7 @@ email:
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  executables:
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  - console
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  - onto2json.rb
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+ - semtools.rb
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  - setup
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  - strsimnet.rb
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  extensions: []
@@ -76,8 +119,10 @@ files:
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  - Rakefile
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  - bin/console
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  - bin/onto2json.rb
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+ - bin/semtools.rb
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  - bin/setup
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  - bin/strsimnet.rb
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+ - external_data/ontologies.txt
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  - lib/data/hp.obo
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  - lib/data/phenotype_annotation.tab
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  - lib/semtools.rb
@@ -105,7 +150,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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  - !ruby/object:Gem::Version
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  version: '0'
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  requirements: []
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- rubygems_version: 3.2.3
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+ rubygems_version: 3.2.15
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  signing_key:
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  specification_version: 4
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  summary: Gem to handle semantic based calculations in text and defined ontologies