search_biomodel 1.0.1 → 1.0.2
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- data/README.rdoc +31 -0
- data/VERSION +1 -1
- data/lib/search_biomodel.rb +10 -5
- data/search_biomodel.gemspec +2 -1
- data/test.rb +24 -0
- metadata +4 -3
data/README.rdoc
CHANGED
@@ -10,6 +10,37 @@ These methods are "search_by_chebiid", "search_by_name" and "get_all_models". Th
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gem install seach_biomodel
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== Usage
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example:
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require 'rubygems'
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require 'seach_biomodel'
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include SysMODB::SearchBiomodel
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puts "\n\n ------------------ List All -----------------------------\n\n"
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all_models = get_all_models
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all_models.each { |item| puts "ID = #{item[:key]} | NAME = #{item[:value]}\n" }
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puts "\n\n ------------------ By Chebiid --------------------------\n\n" i=0
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models_by_chebiid = search_by_ChEBIID("CHEBI:15422")
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models_by_chebiid.each { |item| puts "#{i+=1} #{item.to_s}\n"}
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puts "\n\n ------------------ By Name -----------------------------\n\n" i=0
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models_by_name = search_by_name("Kolomeisky2003")
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models_by_name.each { |item| puts "#{i+=1} #{item.to_s}\n"}
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puts "\n ----------------------------------------------------------\n\n\n"
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== Contributing to search_biomodel
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* Check out the latest master to make sure the feature hasn't been implemented or the bug hasn't been fixed yet
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data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
1.0.
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1
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1.0.2
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data/lib/search_biomodel.rb
CHANGED
@@ -39,11 +39,16 @@ module SysMODB
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private
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def create_connection
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-
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-
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-
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Savon.configure do |config|
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config.log = false
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HTTPI.log = false
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client = Savon::Client.new do
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wsdl.document = "http://www.ebi.ac.uk/biomodels-main/services/BioModelsWebServices?wsdl"
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wsdl.namespace = "http://biomodels.ebi.ac.uk"
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end #client
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end #configure
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end #create_connection
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end #SearchBiomodel
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end #SysMODB
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data/search_biomodel.gemspec
CHANGED
@@ -5,7 +5,7 @@
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Gem::Specification.new do |s|
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s.name = %q{search_biomodel}
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s.version = "1.0.
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s.version = "1.0.2"
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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s.authors = ["Niall Beard"]
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@@ -26,6 +26,7 @@ Gem::Specification.new do |s|
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"VERSION",
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"lib/search_biomodel.rb",
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"search_biomodel.gemspec",
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"test.rb",
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"test/helper.rb",
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"test/test_search_biomodel.rb"
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]
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data/test.rb
ADDED
@@ -0,0 +1,24 @@
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require 'rubygems'
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#require '/home/cspc018/Work/Repos/gems/search_biomodel/lib/search_biomodel.rb'
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require 'seach_biomodel'
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include SysMODB::SearchBiomodel
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puts "\n\n ------------------ List All -----------------------------\n\n"
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all_models = get_all_models
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all_models.each { |item| puts "ID = #{item[:key]} | NAME = #{item[:value]}\n" }
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puts "\n\n ------------------ By Chebiid --------------------------\n\n"
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i=0
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models_by_chebiid = search_by_ChEBIID("CHEBI:15422")
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models_by_chebiid.each { |item| puts "#{i+=1} #{item.to_s}\n"}
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puts "\n\n ------------------ By Name -----------------------------\n\n"
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i=0
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models_by_name = search_by_name("Kolomeisky2003")
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models_by_name.each { |item| puts "#{i+=1} #{item.to_s}\n"}
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puts "\n ----------------------------------------------------------\n\n\n"
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metadata
CHANGED
@@ -1,13 +1,13 @@
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--- !ruby/object:Gem::Specification
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name: search_biomodel
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version: !ruby/object:Gem::Version
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hash:
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hash: 19
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prerelease: false
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segments:
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- 1
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- 0
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-
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version: 1.0.
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- 2
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version: 1.0.2
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platform: ruby
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authors:
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- Niall Beard
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@@ -83,6 +83,7 @@ files:
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- VERSION
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- lib/search_biomodel.rb
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- search_biomodel.gemspec
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- test.rb
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- test/helper.rb
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- test/test_search_biomodel.rb
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has_rdoc: true
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