search_biomodel 1.0.1 → 1.0.2

data/README.rdoc

@@ -10,6 +10,37 @@ These methods are "search_by_chebiid", "search_by_name" and "get_all_models". Th
 
   gem install seach_biomodel
 
+== Usage
+example:
+  
+  require 'rubygems'
+  require 'seach_biomodel'
+
+  include SysMODB::SearchBiomodel
+
+
+  puts "\n\n ------------------ List All -----------------------------\n\n"
+
+  all_models = get_all_models
+  all_models.each { |item| puts "ID = #{item[:key]}    |    NAME = #{item[:value]}\n" }
+
+
+  puts "\n\n ------------------ By Chebiid --------------------------\n\n"  i=0
+
+  models_by_chebiid = search_by_ChEBIID("CHEBI:15422")
+  models_by_chebiid.each { |item| puts "#{i+=1} #{item.to_s}\n"}
+
+
+  puts "\n\n ------------------ By Name -----------------------------\n\n"  i=0
+
+  models_by_name = search_by_name("Kolomeisky2003")
+  models_by_name.each { |item| puts "#{i+=1} #{item.to_s}\n"}
+
+
+  puts "\n ----------------------------------------------------------\n\n\n"
+  
+  
+
 == Contributing to search_biomodel
  
 * Check out the latest master to make sure the feature hasn't been implemented or the bug hasn't been fixed yet

data/VERSION

@@ -1 +1 @@
-1.0.1
+1.0.2

data/lib/search_biomodel.rb

@@ -39,11 +39,16 @@ module SysMODB
     private
    
     def create_connection
-      client = Savon::Client.new do
-        wsdl.document = "http://www.ebi.ac.uk/biomodels-main/services/BioModelsWebServices?wsdl"
-        wsdl.namespace = "http://biomodels.ebi.ac.uk"
-      end
-    end
+      Savon.configure do |config|
+        config.log = false
+        HTTPI.log = false
+        client = Savon::Client.new do
+          wsdl.document = "http://www.ebi.ac.uk/biomodels-main/services/BioModelsWebServices?wsdl"
+          wsdl.namespace = "http://biomodels.ebi.ac.uk"
+        end #client
+      end #configure
+    end #create_connection
+
 
   end #SearchBiomodel
 end #SysMODB

data/search_biomodel.gemspec

@@ -5,7 +5,7 @@
 
 Gem::Specification.new do |s|
   s.name = %q{search_biomodel}
-  s.version = "1.0.1"
+  s.version = "1.0.2"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Niall Beard"]
@@ -26,6 +26,7 @@ Gem::Specification.new do |s|
     "VERSION",
     "lib/search_biomodel.rb",
     "search_biomodel.gemspec",
+    "test.rb",
     "test/helper.rb",
     "test/test_search_biomodel.rb"
   ]

data/test.rb

@@ -0,0 +1,24 @@
+require 'rubygems'
+#require '/home/cspc018/Work/Repos/gems/search_biomodel/lib/search_biomodel.rb'
+require 'seach_biomodel'
+
+
+  include SysMODB::SearchBiomodel
+
+  puts "\n\n ------------------ List All -----------------------------\n\n"
+  all_models = get_all_models
+  all_models.each { |item| puts "ID = #{item[:key]}    |    NAME = #{item[:value]}\n" }
+
+
+  puts "\n\n ------------------ By Chebiid --------------------------\n\n"
+  i=0
+  models_by_chebiid = search_by_ChEBIID("CHEBI:15422")
+  models_by_chebiid.each { |item| puts "#{i+=1} #{item.to_s}\n"}
+
+
+  puts "\n\n ------------------ By Name -----------------------------\n\n"
+  i=0
+  models_by_name = search_by_name("Kolomeisky2003")
+  models_by_name.each { |item| puts "#{i+=1} #{item.to_s}\n"}
+
+  puts "\n ----------------------------------------------------------\n\n\n"

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: search_biomodel
 version: !ruby/object:Gem::Version 
-  hash: 21
+  hash: 19
   prerelease: false
   segments: 
   - 1
   - 0
-  - 1
-  version: 1.0.1
+  - 2
+  version: 1.0.2
 platform: ruby
 authors: 
 - Niall Beard
@@ -83,6 +83,7 @@ files:
 - VERSION
 - lib/search_biomodel.rb
 - search_biomodel.gemspec
+- test.rb
 - test/helper.rb
 - test/test_search_biomodel.rb
 has_rdoc: true