scout-gear 10.8.1 → 10.8.3

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: a16e6fadbdab77f5dd56efff644adb5b79c7765642d87cee21f297eb4e783bee
-  data.tar.gz: 2d4e225ec569e3fc8f569835b865effc6b3428e23b6feba3d4f9e8d092cb8a13
+  metadata.gz: aa23ee1be6e784b3875d08336b9c093f137b5ff75e48e487e15b6f5fc23de3c6
+  data.tar.gz: 4527449eb1764d3c1de6a93b94ff6ddc178a3d1968ed6b530a4cda4456c3f012
 SHA512:
-  metadata.gz: 3103bc1c224105e7a5d5ac74181a62c6457d6b38cb4f59db2615be3962cef24777f25918977d738c02903b0b831606991c1015b2a7fa77fb03def9fce1b29cc7
-  data.tar.gz: a09e7bf564fc5e4711bee14df56b7e8cd108b52cd9f02318d255964b58a9bc7585829a411629733c9cdd78060ac8d9b932491924d8227c03540fe93f55d04ccf
+  metadata.gz: cd4933a3f9605d84024fe3f32b86f0103d6bc1a41941d1c258541b48cb1559937982130706bda7702d45246a79ab628360c9fab83fb4a97ac1141082c979ff7c
+  data.tar.gz: 627c8fb68070b9284c60ff32c70bf6bfaf8951d4569ce2c67bd0fda89eab18366c8e5865a94f5dc0e90f2ad7930a52416ea4dd02c6eb76bc2a777e6267dd9d66

data/VERSION

@@ -1 +1 @@
-10.8.1
+10.8.3

data/lib/scout/workflow/deployment/orchestrator.rb

@@ -191,6 +191,7 @@ module Workflow
     def process(rules, jobs = nil)
       jobs, rules = rules, {} if jobs.nil?
       jobs = [jobs] if Step === jobs
+      failed_jobs = []
       begin
 
         workload = Orchestrator.workload(jobs)
@@ -199,7 +200,6 @@ module Workflow
         all_jobs.each{|job| job.clean unless (job.done? && job.updated?) || (job.error? && ! job.recoverable_error?) }
 
         top_level_jobs = jobs.collect{|job| job.path }
-        failed_jobs = []
         while workload.any? 
 
           candidates = resources_used.keys + Orchestrator.candidates(workload, rules)

data/scout-gear.gemspec

@@ -2,16 +2,16 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Juwelier::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: scout-gear 10.8.1 ruby lib
+# stub: scout-gear 10.8.3 ruby lib
 
 Gem::Specification.new do |s|
   s.name = "scout-gear".freeze
-  s.version = "10.8.1".freeze
+  s.version = "10.8.3".freeze
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib".freeze]
   s.authors = ["Miguel Vazquez".freeze]
-  s.date = "2025-06-12"
+  s.date = "2025-06-13"
   s.description = "Scout gear: workflow, TSVs, persistence, entities, associations, and knowledge_bases.".freeze
   s.email = "mikisvaz@gmail.com".freeze
   s.executables = ["scout".freeze]

data/scout_commands/glob

@@ -0,0 +1,90 @@
+#!/usr/bin/env ruby
+
+require 'scout-gear'
+
+$0 = "scout #{$previous_commands.any? ? $previous_commands*" " + " " : "" }#{ File.basename(__FILE__) }" if $previous_commands
+
+options = SOPT.setup <<EOF
+
+Find files with glob
+
+$ #{$0} [<options>] (<resource> <path>|<path>)
+
+-h--help Print this help
+-r--requires* Files to require; 'all' for all in Scout.etc.requires
+-lw--load_workflow* Files to require; 'all' for all in Scout.etc.requires
+-w--where* Where to look for the path
+EOF
+if options[:help]
+  if defined? scout_usage
+    scout_usage
+  else
+    puts SOPT.doc
+  end
+  exit 0
+end
+
+resource, path = ARGV
+path, resource = resource, nil if path.nil?
+
+raise MissingParameterException.new(:path) if path.nil?
+
+case options[:workflows]
+when nil, false, "false", "none"
+when "all"
+  Scout.etc.workflows.list.each do |workflow|
+    Workflow.require_workflow file
+  end if Scout.etc.workflows.exists?
+else
+  options[:workflows].split(/[ ,;|]/).each do |workflow|
+    Workflow.require_workflow workflow
+  end
+end
+
+case options[:requires]
+when nil, false, "false", "none"
+when "all"
+  Scout.etc.requires.list.each do |file|
+    require file
+  end if Scout.etc.requires.exists?
+else
+  options[:requires].split(/[ ,;|]/).each do |file|
+    require file
+  end
+end
+
+location = nil
+where = options[:where]
+all = options[:all]
+
+begin
+  resource = Workflow.require_workflow resource
+rescue
+  begin
+    resource = Kernel.const_get(resource)
+  rescue
+    raise "Resource not found: #{ resource }"
+  end
+end if resource
+
+path = (resource || Scout)[path.dup]
+
+if where.nil? || where == 'all' || path.path_maps.include?(where.to_sym)
+  case where
+  when nil
+    location = path.glob
+  when 'all'
+    location = path.glob_all
+  else
+    location = path.find(where).glob
+  end
+
+  if Array === location
+    puts location * "\n"
+  else
+    location = nil if ! Open.exists?(location)
+    puts location
+  end
+else
+  raise ParameterException, "Where '#{where}' not identified. Try scout-camp if looking for a remote file"
+end

data/scout_commands/workflow/task

@@ -18,7 +18,7 @@ $ #{$0} [<options>] <workflow> <task>
 -h--help Print this help
 --nostream Disable job streaming
 --update Update jobs with newer dependencies
---deploy* Deploy mode: serial, local, or SLURM (default 'serial')
+--deploy* Deploy mode: serial, local, queue, or SLURM (default 'serial')
 --fork Fork and return path
 --load_inputs* Directory or file with inputs files to load
 --save_inputs* Directory or tar.gz file path to store inputs

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification
 name: scout-gear
 version: !ruby/object:Gem::Version
-  version: 10.8.1
+  version: 10.8.3
 platform: ruby
 authors:
 - Miguel Vazquez
 bindir: bin
 cert_chain: []
-date: 2025-06-12 00:00:00.000000000 Z
+date: 2025-06-13 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: scout-essentials