scout-gear 1.2.0 → 5.1.1
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- checksums.yaml +4 -4
- data/.gitmodules +4 -0
- data/.vimproject +663 -4
- data/Rakefile +1 -0
- data/VERSION +1 -1
- data/bin/scout +235 -0
- data/lib/scout/cmd.rb +344 -0
- data/lib/scout/concurrent_stream.rb +259 -0
- data/lib/scout/exceptions.rb +15 -8
- data/lib/scout/indiferent_hash/options.rb +8 -26
- data/lib/scout/indiferent_hash.rb +0 -30
- data/lib/scout/log/color.rb +2 -2
- data/lib/scout/log/fingerprint.rb +11 -1
- data/lib/scout/log/progress/report.rb +0 -1
- data/lib/scout/log/progress/util.rb +1 -1
- data/lib/scout/log/progress.rb +4 -4
- data/lib/scout/log.rb +10 -2
- data/lib/scout/meta_extension.rb +15 -1
- data/lib/scout/misc/digest.rb +56 -0
- data/lib/scout/misc/filesystem.rb +26 -0
- data/lib/scout/misc/format.rb +226 -0
- data/lib/scout/misc/insist.rb +56 -0
- data/lib/scout/misc.rb +5 -11
- data/lib/scout/open/lock.rb +61 -0
- data/lib/scout/open/remote.rb +120 -0
- data/lib/scout/open/stream.rb +372 -0
- data/lib/scout/open/util.rb +225 -0
- data/lib/scout/open.rb +169 -0
- data/lib/scout/path/find.rb +78 -26
- data/lib/scout/path/tmpfile.rb +8 -0
- data/lib/scout/path/util.rb +17 -5
- data/lib/scout/path.rb +13 -31
- data/lib/scout/persist/open.rb +17 -0
- data/lib/scout/persist/path.rb +15 -0
- data/lib/scout/persist/serialize.rb +140 -0
- data/lib/scout/persist.rb +54 -0
- data/lib/scout/resource/path.rb +15 -0
- data/lib/scout/resource/produce/rake.rb +69 -0
- data/lib/scout/resource/produce.rb +246 -0
- data/lib/scout/resource/scout.rb +3 -0
- data/lib/scout/resource.rb +37 -0
- data/lib/scout/simple_opt/accessor.rb +54 -0
- data/lib/scout/simple_opt/doc.rb +102 -0
- data/lib/scout/simple_opt/get.rb +57 -0
- data/lib/scout/simple_opt/parse.rb +67 -0
- data/lib/scout/simple_opt/setup.rb +26 -0
- data/lib/scout/simple_opt.rb +5 -0
- data/lib/scout/tmpfile.rb +39 -1
- data/lib/scout/workflow/definition.rb +72 -0
- data/lib/scout/workflow/documentation.rb +77 -0
- data/lib/scout/workflow/step/info.rb +77 -0
- data/lib/scout/workflow/step.rb +96 -0
- data/lib/scout/workflow/task/inputs.rb +112 -0
- data/lib/scout/workflow/task.rb +141 -0
- data/lib/scout/workflow/usage.rb +294 -0
- data/lib/scout/workflow/util.rb +11 -0
- data/lib/scout/workflow.rb +39 -0
- data/lib/scout-gear.rb +5 -0
- data/lib/scout.rb +1 -0
- data/lib/workflow-scout.rb +2 -0
- data/scout-gear.gemspec +78 -5
- data/scout_commands/alias +48 -0
- data/scout_commands/find +83 -0
- data/scout_commands/glob +0 -0
- data/scout_commands/rbbt +23 -0
- data/scout_commands/workflow/task +707 -0
- data/test/scout/indiferent_hash/test_case_insensitive.rb +16 -0
- data/test/scout/indiferent_hash/test_options.rb +11 -1
- data/test/scout/misc/test_digest.rb +30 -0
- data/test/scout/misc/test_filesystem.rb +30 -0
- data/test/scout/misc/test_insist.rb +13 -0
- data/test/scout/open/test_lock.rb +52 -0
- data/test/scout/open/test_remote.rb +25 -0
- data/test/scout/open/test_stream.rb +515 -0
- data/test/scout/open/test_util.rb +73 -0
- data/test/scout/path/test_find.rb +37 -1
- data/test/scout/persist/test_open.rb +37 -0
- data/test/scout/persist/test_path.rb +37 -0
- data/test/scout/persist/test_serialize.rb +114 -0
- data/test/scout/resource/test_path.rb +40 -0
- data/test/scout/resource/test_produce.rb +62 -0
- data/test/scout/simple_opt/test_get.rb +11 -0
- data/test/scout/simple_opt/test_parse.rb +10 -0
- data/test/scout/simple_opt/test_setup.rb +77 -0
- data/test/scout/test_cmd.rb +85 -0
- data/test/scout/test_concurrent_stream.rb +29 -0
- data/test/scout/test_misc.rb +0 -7
- data/test/scout/test_open.rb +146 -0
- data/test/scout/test_path.rb +3 -1
- data/test/scout/test_persist.rb +83 -0
- data/test/scout/test_resource.rb +26 -0
- data/test/scout/test_workflow.rb +87 -0
- data/test/scout/workflow/step/test_info.rb +28 -0
- data/test/scout/workflow/task/test_inputs.rb +182 -0
- data/test/scout/workflow/test_step.rb +36 -0
- data/test/scout/workflow/test_task.rb +178 -0
- data/test/scout/workflow/test_usage.rb +26 -0
- data/test/scout/workflow/test_util.rb +17 -0
- data/test/test_helper.rb +17 -0
- data/test/test_scout-gear.rb +0 -0
- metadata +76 -3
@@ -3,6 +3,16 @@ require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1
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class TestOptions < Test::Unit::TestCase
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def test_add_defaults
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options = {:a => 1, "b" => 2}
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assert_equal 2, IndiferentHash.add_defaults(options, :b => 3)["b"]
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assert_equal 2, IndiferentHash.add_defaults(options, "b" => 3)["b"]
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assert_equal 3, IndiferentHash.add_defaults(options, :c => 3)["c"]
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assert_equal 3, IndiferentHash.add_defaults(options, "c" => 4)[:c]
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assert_equal 3, IndiferentHash.add_defaults(options, "c" => 4)["c"]
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end
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def test_positions2hash
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inputs = IndiferentHash.positional2hash([:one, :two, :three], 1, :two => 2, :four => 4)
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assert_equal 1, inputs[:one]
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@@ -13,7 +23,7 @@ class TestOptions < Test::Unit::TestCase
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def test_process_to_hash
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list = [1,2,3,4]
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-
assert_equal 4, IndiferentHash.process_to_hash(list){|l| l.collect{|e| e * 2}}[2]
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assert_equal 4, IndiferentHash.process_to_hash(list){|l| l.collect{|e| e * 2 } }[2]
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end
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def test_hash2string
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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class TestMiscDigest < Test::Unit::TestCase
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def test_digest_str
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o = {:a => [1,2,3], :b => [1.1, 0.00001, 'hola']}
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assert Misc.digest_str(o).include? "hola"
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end
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def test_digest_stream_located
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TmpFile.with_file("TEST") do |filename|
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Open.open(filename) do |f|
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assert_equal 32, Misc.digest_str(f).length
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end
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end
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end
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def test_digest_stream_unlocated
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TmpFile.with_file do |directory|
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Path.setup(directory)
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Open.write(directory.share.file, "TEST")
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Misc.in_dir directory do
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Open.open(Path.setup('share/file')) do |f|
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assert_equal '\'share/file\'', Misc.digest_str(Path.setup('share/file'))
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end
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end
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end
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end
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end
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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class TestFilesystem < Test::Unit::TestCase
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def test_in_dir
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TmpFile.with_file do |tmpdir|
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Misc.in_dir tmpdir do
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assert_equal tmpdir, FileUtils.pwd
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end
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end
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end
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def test_relative
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assert_equal 'bar', Misc.path_relative_to("/tmp/foo", "/tmp/foo/bar")
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assert_equal 'bar/other', Misc.path_relative_to("/tmp/foo", "/tmp/foo/bar/other")
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refute Misc.path_relative_to("/tmp/bar", "/tmp/foo/bar/other")
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refute Misc.path_relative_to("/tmp/foo", "tmp/foo/bar/other")
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TmpFile.with_file do |tmpdir|
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Misc.in_dir tmpdir do
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assert Misc.path_relative_to(tmpdir, "foo")
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assert Misc.path_relative_to(tmpdir, File.join(tmpdir, "foo"))
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end
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assert Misc.path_relative_to(tmpdir, File.join(tmpdir, "foo"))
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assert Misc.path_relative_to(File.dirname(tmpdir), File.join(tmpdir, "foo"))
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end
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end
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end
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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class TestMiscInsist < Test::Unit::TestCase
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def test_insist
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i = 0
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Misc.insist do
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i += 1
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raise "Not yet" if i < 3
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end
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end
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end
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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require 'scout/tmpfile'
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class TestLock < Test::Unit::TestCase
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def test_locks
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num = 10
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TmpFile.with_file do |lockfile|
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TmpFile.with_file do |output|
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f = File.open(output, 'w')
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thrs = num.times.collect do
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Thread.new do
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Open.lock lockfile, true, min_sleep: 0.01, max_sleep: 0.05, sleep_inc: 0.001 do
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f.write "["
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sleep 0.01
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f.write "]"
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end
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end
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end
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thrs.each{|t| t.join }
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f.close
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assert_equal "[]" * num, File.open(output).read
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end
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end
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end
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def test_keep_locked
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num = 10
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TmpFile.with_file do |lockfile|
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TmpFile.with_file do |output|
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f = File.open(output, 'w')
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thrs = num.times.collect do
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Thread.new do
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lock = Lockfile.new(lockfile, min_sleep: 0.01, max_sleep: 0.05, sleep_inc: 0.001)
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res = Open.lock lock do
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f.write "["
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raise KeepLocked, "1"
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end
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f.write res
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f.write "]"
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lock.unlock
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end
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end
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thrs.each{|t| t.join }
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f.close
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assert_equal "[1]" * num, File.open(output).read
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end
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end
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end
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end
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@@ -0,0 +1,25 @@
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1
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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require 'scout/open'
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class TestOpenRemote < Test::Unit::TestCase
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def test_wget
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8
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teardown
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5.times do
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assert(Misc.fixutf8(Open.wget('http://google.com', :quiet => true, :nocache => true).read) =~ /html/)
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assert(Misc.fixutf8(Open.wget('http://google.com', :quiet => true).read) =~ /html/)
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end
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end
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def test_ssh
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TmpFile.with_file("TEST") do |f|
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begin
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assert_equal "TEST", Open.ssh("ssh://localhost:#{f}").read
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rescue ConcurrentStreamProcessFailed
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raise $! unless $!.message.include? "Connection refused"
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end
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end if false
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end
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end
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@@ -0,0 +1,515 @@
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require File.expand_path(__FILE__).sub(%r(/test/.*), '/test/test_helper.rb')
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require File.expand_path(__FILE__).sub(%r(.*/test/), '').sub(/test_(.*)\.rb/,'\1')
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3
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require 'scout/path'
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require 'scout/open'
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7
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class TestOpenStream < Test::Unit::TestCase
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def test_consume_stream
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9
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content =<<-EOF
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1
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2
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3
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13
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4
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EOF
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TmpFile.with_file(content) do |file|
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TmpFile.with_file do |target|
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f = File.open(file)
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Open.consume_stream(f, false, target)
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assert_equal content, File.open(target).read
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end
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end
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end
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def test_sensible_write
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content =<<-EOF
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1
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2
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3
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4
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EOF
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TmpFile.with_file(content) do |file|
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TmpFile.with_file do |target|
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f = File.open(file)
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Open.sensible_write(target, f)
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assert_equal content, File.open(target).read
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end
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end
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38
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end
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39
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|
40
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def test_open_pipe
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41
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sout = Open.open_pipe do |sin|
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42
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10.times do |i|
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sin.puts "line #{i}"
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44
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end
|
45
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end
|
46
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TmpFile.with_file do |tmp|
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Open.consume_stream(sout, false, tmp)
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assert_equal 10, Open.read(tmp).split("\n").length
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50
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end
|
51
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end
|
52
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|
53
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def test_open_pipe_and_close
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54
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55
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10000.times do
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56
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sout = Open.open_pipe do |sin|
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57
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sin.puts "hola"
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58
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end
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59
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sout.read
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sout.close
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61
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end
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62
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end
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63
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|
64
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65
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def test_open_pipe_error
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66
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sout = Open.open_pipe do |sin|
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67
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10.times do |i|
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68
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sin.puts "line #{i}"
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69
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end
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70
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raise ScoutException
|
71
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end
|
72
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|
73
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TmpFile.with_file do |tmp|
|
74
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assert_raise ScoutException do
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75
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Open.consume_stream(sout, false, tmp)
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76
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end
|
77
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end
|
78
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end
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79
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|
80
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def test_tee_stream
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81
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num = 2000
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82
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sout = Open.open_pipe do |sin|
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83
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num.times do |i|
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84
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sin.puts "line #{i} - #{rand(100000).to_s * 100}"
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85
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end
|
86
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end
|
87
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+
|
88
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TmpFile.with_file do |tmp|
|
89
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Path.setup tmp
|
90
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+
|
91
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s1, s2 = Open.tee_stream_thread sout
|
92
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+
|
93
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t1 = Open.consume_stream(s1, true, tmp.file1)
|
94
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t2 = Open.consume_stream(s2, true, tmp.file2)
|
95
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t1.join
|
96
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t2.join
|
97
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assert_equal num, Open.read(tmp.file1).split("\n").length
|
98
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+
assert_equal num, Open.read(tmp.file2).split("\n").length
|
99
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+
end
|
100
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+
end
|
101
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+
|
102
|
+
def test_tee_stream_source_error
|
103
|
+
5.times do |i|
|
104
|
+
num = 2000
|
105
|
+
sout = Open.open_pipe do |sin|
|
106
|
+
num.times do |i|
|
107
|
+
sin.puts "line #{i} - #{rand(100000).to_s * 100}"
|
108
|
+
end
|
109
|
+
raise ScoutException
|
110
|
+
end
|
111
|
+
|
112
|
+
TmpFile.with_file do |tmp|
|
113
|
+
Path.setup tmp
|
114
|
+
|
115
|
+
s1, s2 = Open.tee_stream_thread sout
|
116
|
+
|
117
|
+
t1 = Open.consume_stream(s1, true, tmp.file1)
|
118
|
+
t2 = Open.consume_stream(s2, true, tmp.file2)
|
119
|
+
assert_raise ScoutException do
|
120
|
+
begin
|
121
|
+
t1.join
|
122
|
+
t2.join
|
123
|
+
rescue
|
124
|
+
raise
|
125
|
+
ensure
|
126
|
+
[t1, t2].each do |t|
|
127
|
+
begin
|
128
|
+
t.join if t.alive?
|
129
|
+
rescue ScoutException
|
130
|
+
end
|
131
|
+
end
|
132
|
+
end
|
133
|
+
end
|
134
|
+
refute Open.exist?(tmp.file1)
|
135
|
+
refute Open.exist?(tmp.file2)
|
136
|
+
end
|
137
|
+
end
|
138
|
+
end
|
139
|
+
|
140
|
+
def test_tee_stream_save_error
|
141
|
+
Log.with_severity 6 do
|
142
|
+
5.times do |i|
|
143
|
+
TmpFile.with_file do |tmp|
|
144
|
+
Path.setup tmp
|
145
|
+
assert_raise ScoutException do
|
146
|
+
num = 2000
|
147
|
+
begin
|
148
|
+
sout = Open.open_pipe do |sin|
|
149
|
+
num.times do |i|
|
150
|
+
sin.puts "line #{i} - #{rand(100000).to_s * 100}"
|
151
|
+
end
|
152
|
+
end
|
153
|
+
|
154
|
+
begin
|
155
|
+
s1, s2 = Open.tee_stream_thread sout
|
156
|
+
|
157
|
+
s2.abort ScoutException.new
|
158
|
+
t = Open.consume_stream(s1, true, tmp.file)
|
159
|
+
|
160
|
+
t.join
|
161
|
+
ensure
|
162
|
+
s1.close if s1.respond_to?(:close) && ! s1.closed?
|
163
|
+
s1.join if s1.respond_to?(:join) && ! s1.joined?
|
164
|
+
s2.close if s2.respond_to?(:close) && ! s2.closed?
|
165
|
+
s2.join if s2.respond_to?(:join) && ! s2.joined?
|
166
|
+
end
|
167
|
+
ensure
|
168
|
+
sout.close if sout.respond_to?(:close) && ! sout.closed?
|
169
|
+
sout.join if sout.respond_to?(:join) && ! sout.joined?
|
170
|
+
end
|
171
|
+
end
|
172
|
+
refute Open.exist?(tmp.file)
|
173
|
+
end
|
174
|
+
end
|
175
|
+
end
|
176
|
+
end
|
177
|
+
|
178
|
+
# def test_collapse_stream
|
179
|
+
# text=<<-EOF
|
180
|
+
#row1 A B C
|
181
|
+
#row1 a b c
|
182
|
+
#row2 AA BB CC
|
183
|
+
#row2 aa bb cc
|
184
|
+
# EOF
|
185
|
+
#
|
186
|
+
# s = StringIO.new text
|
187
|
+
# tsv = TSV.open Misc.collapse_stream(s,nil, " "), :sep => " "
|
188
|
+
# assert_equal ["A", "a"], tsv["row1"][0]
|
189
|
+
# assert_equal ["BB", "bb"], tsv["row2"][1]
|
190
|
+
# end
|
191
|
+
#
|
192
|
+
# def test_collapse_sum
|
193
|
+
# text=<<-EOF
|
194
|
+
#row1 12
|
195
|
+
#row1 4
|
196
|
+
#row2 10
|
197
|
+
#row2 6
|
198
|
+
# EOF
|
199
|
+
#
|
200
|
+
# s = StringIO.new text
|
201
|
+
# stream = Misc.collapse_stream(s,nil, " ") do |parts|
|
202
|
+
# next nil if parts.empty?
|
203
|
+
# parts.first.split("|").collect{|p| p.to_f}.inject(0){|acc,e| acc += e}.to_s
|
204
|
+
# end
|
205
|
+
# tsv = TSV.open stream, :sep => " "
|
206
|
+
# ppp tsv.to_s
|
207
|
+
# end
|
208
|
+
#
|
209
|
+
# def test_collapse_stream_gap
|
210
|
+
# text=<<-EOF
|
211
|
+
#row2 AA BB
|
212
|
+
#row2 aa bb cc
|
213
|
+
# EOF
|
214
|
+
#
|
215
|
+
# s = StringIO.new text
|
216
|
+
# assert Misc.collapse_stream(s, nil, " ").read =~ /\|cc$/
|
217
|
+
#
|
218
|
+
# text=<<-EOF
|
219
|
+
#row2 aa bb cc
|
220
|
+
#row2 AA BB
|
221
|
+
# EOF
|
222
|
+
#
|
223
|
+
# s = StringIO.new text
|
224
|
+
# assert Misc.collapse_stream(s, nil, " ").read =~ /cc\|$/
|
225
|
+
#
|
226
|
+
# text=<<-EOF
|
227
|
+
#row2 AA BB
|
228
|
+
#row2 aa bb cc
|
229
|
+
# EOF
|
230
|
+
#
|
231
|
+
# s = StringIO.new text
|
232
|
+
# assert Misc.collapse_stream(s, nil, " ").read =~ /\|cc$/
|
233
|
+
#
|
234
|
+
# end
|
235
|
+
#
|
236
|
+
#
|
237
|
+
# def test_paste_stream
|
238
|
+
# text1=<<-EOF
|
239
|
+
#row1 A B C
|
240
|
+
#row2 AA BB CC
|
241
|
+
#row3 AAA BBB CCC
|
242
|
+
# EOF
|
243
|
+
#
|
244
|
+
# text2=<<-EOF
|
245
|
+
#row1 a b
|
246
|
+
#row2 aa bb
|
247
|
+
# EOF
|
248
|
+
#
|
249
|
+
# text3=<<-EOF
|
250
|
+
#row1 c
|
251
|
+
#row2 cc
|
252
|
+
#row3 ccc
|
253
|
+
# EOF
|
254
|
+
#
|
255
|
+
# s1 = StringIO.new text1
|
256
|
+
# s2 = StringIO.new text2
|
257
|
+
# s3 = StringIO.new text3
|
258
|
+
# tsv = TSV.open Misc.paste_streams([s1,s2,s3], nil, " "), :sep => " ", :type => :list
|
259
|
+
# assert_equal ["A", "B", "C", "a", "b", "c"], tsv["row1"]
|
260
|
+
# assert_equal ["AA", "BB", "CC", "aa", "bb", "cc"], tsv["row2"]
|
261
|
+
# assert_equal ["AAA", "BBB", "CCC", "", "", "ccc"], tsv["row3"]
|
262
|
+
# end
|
263
|
+
#
|
264
|
+
# def test_sort_stream
|
265
|
+
# text =<<-EOF
|
266
|
+
###
|
267
|
+
###
|
268
|
+
###
|
269
|
+
##Row LabelA LabelB LabelC
|
270
|
+
#row2 AA BB CC
|
271
|
+
#row3 AAA BBB CCC
|
272
|
+
#row1 A B C
|
273
|
+
# EOF
|
274
|
+
# s = StringIO.new text
|
275
|
+
# sorted = Misc.sort_stream(s)
|
276
|
+
# assert_equal %w(## ## ## #Row row2 row3 row1), text.split("\n").collect{|l| l.split(" ").first}
|
277
|
+
# assert_equal %w(## ## ## #Row row1 row2 row3), sorted.read.split("\n").collect{|l| l.split(" ").first}
|
278
|
+
# end
|
279
|
+
#
|
280
|
+
# def test_sort_long_stream
|
281
|
+
# text =<<-EOF
|
282
|
+
###
|
283
|
+
###
|
284
|
+
###
|
285
|
+
##Row LabelA LabelB LabelC
|
286
|
+
#row2 AA BB CC
|
287
|
+
#row3 AAA BBB CCC
|
288
|
+
#row1 A B C
|
289
|
+
# EOF
|
290
|
+
#
|
291
|
+
# s = StringIO.new text + (text.split("\n")[-3..-1] * "\n" + "\n") * 10000
|
292
|
+
# sorted = Misc.sort_stream(s)
|
293
|
+
# assert_equal %w(## ## ## #Row row2 row3 row1), text.split("\n").collect{|l| l.split(" ").first}
|
294
|
+
# assert_equal %w(## ## ## #Row row1 row2 row3), sorted.read.split("\n").collect{|l| l.split(" ").first}
|
295
|
+
# end
|
296
|
+
#
|
297
|
+
# def test_sort_stream2
|
298
|
+
# text =<<-EOF
|
299
|
+
###
|
300
|
+
###
|
301
|
+
###
|
302
|
+
##Row LabelA LabelB LabelC
|
303
|
+
#row2 AA BB CC
|
304
|
+
#row3 AAA BBB CCC
|
305
|
+
#row1 A B C
|
306
|
+
# EOF
|
307
|
+
# s = StringIO.new text
|
308
|
+
# sorted = Misc.sort_stream(Misc.sort_stream(s))
|
309
|
+
# assert_equal %w(## ## ## #Row row2 row3 row1), text.split("\n").collect{|l| l.split(" ").first}
|
310
|
+
# assert_equal %w(## ## ## #Row row1 row2 row3), sorted.read.split("\n").collect{|l| l.split(" ").first}
|
311
|
+
# end
|
312
|
+
#
|
313
|
+
# def test_dup_stream
|
314
|
+
# text =<<-EOF
|
315
|
+
##: :sep=" "
|
316
|
+
##Row LabelA LabelB LabelC
|
317
|
+
#row2 AA BB CC
|
318
|
+
#row3 AAA BBB CCC
|
319
|
+
#row1 A B C
|
320
|
+
# EOF
|
321
|
+
#
|
322
|
+
# text = text * 10000
|
323
|
+
# TmpFile.with_file(text) do |tmp|
|
324
|
+
# io = Open.open(tmp)
|
325
|
+
# dup = Misc.dup_stream(io)
|
326
|
+
# new_text = StringIO.new ""
|
327
|
+
# Misc.consume_stream dup, true, new_text
|
328
|
+
# Misc.consume_stream io, false
|
329
|
+
# new_text.rewind
|
330
|
+
# assert_equal text, new_text.read
|
331
|
+
# end
|
332
|
+
#
|
333
|
+
#
|
334
|
+
# TmpFile.with_file(text) do |tmp|
|
335
|
+
# io = Open.open(tmp)
|
336
|
+
# dup = Misc.dup_stream(io)
|
337
|
+
# Misc.consume_stream dup, true
|
338
|
+
# assert_equal text, io.read
|
339
|
+
# end
|
340
|
+
# end
|
341
|
+
#
|
342
|
+
# def test_dup_stream_multiple
|
343
|
+
# text =<<-EOF
|
344
|
+
#row2 AA BB CC
|
345
|
+
#row3 AAA BBB CCC
|
346
|
+
#row1 A B C
|
347
|
+
# EOF
|
348
|
+
#
|
349
|
+
# text = text * 10000
|
350
|
+
# num = 5
|
351
|
+
# str_io = StringIO.new
|
352
|
+
# strs = []
|
353
|
+
# num.times{ strs << StringIO.new }
|
354
|
+
# TmpFile.with_file(text) do |tmp|
|
355
|
+
# io = Open.open(tmp)
|
356
|
+
# copies = Misc.dup_stream_multiple(io, num)
|
357
|
+
#
|
358
|
+
#
|
359
|
+
# copies.each_with_index do |cio,i|
|
360
|
+
# cio.add_callback do
|
361
|
+
# str = strs[i]
|
362
|
+
# str.rewind
|
363
|
+
# assert_equal text, str.read
|
364
|
+
# end
|
365
|
+
# Misc.consume_stream cio, true, strs[i], false
|
366
|
+
# end
|
367
|
+
#
|
368
|
+
#
|
369
|
+
# Misc.consume_stream io, false, str_io, false
|
370
|
+
# str_io.rewind
|
371
|
+
# assert_equal text, str_io.read
|
372
|
+
#
|
373
|
+
# end
|
374
|
+
# end
|
375
|
+
#
|
376
|
+
# def test_remove_lines
|
377
|
+
# text1 =<<-EOF
|
378
|
+
#line1
|
379
|
+
#line2
|
380
|
+
#line3
|
381
|
+
#line4
|
382
|
+
# EOF
|
383
|
+
# text2 =<<-EOF
|
384
|
+
#line3
|
385
|
+
#line1
|
386
|
+
# EOF
|
387
|
+
#
|
388
|
+
# TmpFile.with_file(text1) do |file1|
|
389
|
+
# TmpFile.with_file(text2) do |file2|
|
390
|
+
# assert ! Misc.remove_lines(file1, file2, true).read.split("\n").include?("line1")
|
391
|
+
# assert Misc.remove_lines(file1, file2, true).read.split("\n").include?("line2")
|
392
|
+
# end
|
393
|
+
# end
|
394
|
+
# end
|
395
|
+
#
|
396
|
+
#
|
397
|
+
#
|
398
|
+
# def test_select_lines
|
399
|
+
# text1 =<<-EOF
|
400
|
+
#line1
|
401
|
+
#line2
|
402
|
+
#line3
|
403
|
+
#line4
|
404
|
+
# EOF
|
405
|
+
# text2 =<<-EOF
|
406
|
+
#line3
|
407
|
+
#line1
|
408
|
+
#line5
|
409
|
+
# EOF
|
410
|
+
#
|
411
|
+
# TmpFile.with_file(text1) do |file1|
|
412
|
+
# TmpFile.with_file(text2) do |file2|
|
413
|
+
# assert Misc.select_lines(file1, file2, true).read.split("\n").include?("line1")
|
414
|
+
# assert ! Misc.select_lines(file1, file2, true).read.split("\n").include?("line2")
|
415
|
+
# end
|
416
|
+
# end
|
417
|
+
# end
|
418
|
+
#
|
419
|
+
# def test_consume_into_string_io
|
420
|
+
# text =<<-EOF
|
421
|
+
#line1
|
422
|
+
#line2
|
423
|
+
#line3
|
424
|
+
#line4
|
425
|
+
# EOF
|
426
|
+
#
|
427
|
+
# TmpFile.with_file(text) do |file|
|
428
|
+
# out = StringIO.new
|
429
|
+
# io = Open.open(file)
|
430
|
+
# Misc.consume_stream(io, false, out, false)
|
431
|
+
# out.rewind
|
432
|
+
# assert_equal text, out.read
|
433
|
+
# end
|
434
|
+
# end
|
435
|
+
#
|
436
|
+
# def test_monitor
|
437
|
+
# text =<<-EOF
|
438
|
+
#line1
|
439
|
+
#line2
|
440
|
+
#line3
|
441
|
+
#line4
|
442
|
+
# EOF
|
443
|
+
#
|
444
|
+
# TmpFile.with_file(text) do |file|
|
445
|
+
# io = Open.open(file)
|
446
|
+
# lines = Set.new
|
447
|
+
# io2 = Misc.line_monitor_stream io do |line|
|
448
|
+
# lines << line
|
449
|
+
# end
|
450
|
+
# Misc.consume_stream(io2, false)
|
451
|
+
# assert_equal text, lines.to_a * ""
|
452
|
+
# end
|
453
|
+
# end
|
454
|
+
#
|
455
|
+
# def test_sort
|
456
|
+
# assert_raise RbbtException do
|
457
|
+
# io = Misc.open_pipe do |sin|
|
458
|
+
# sin.puts "#START"
|
459
|
+
# 20.times do
|
460
|
+
# sin.puts rand(1000).to_s
|
461
|
+
# sleep 0.1
|
462
|
+
# end
|
463
|
+
# raise RbbtException
|
464
|
+
# end
|
465
|
+
#
|
466
|
+
# sio = Misc.sort_stream(io)
|
467
|
+
# begin
|
468
|
+
# Misc.consume_stream(sio, false, STDOUT)
|
469
|
+
# rescue
|
470
|
+
# raise $!
|
471
|
+
# end
|
472
|
+
# end
|
473
|
+
# end
|
474
|
+
#
|
475
|
+
# def test_gz_pipe
|
476
|
+
# text =<<-EOF
|
477
|
+
#line1
|
478
|
+
#line2
|
479
|
+
#line3
|
480
|
+
#line4
|
481
|
+
# EOF
|
482
|
+
#
|
483
|
+
# TmpFile.with_file nil, :extension => 'txt.gz' do |file|
|
484
|
+
# sout = Misc.open_gz_pipe do |sin|
|
485
|
+
# text.split("\n").each do |line|
|
486
|
+
# sin.puts line
|
487
|
+
# end
|
488
|
+
# end
|
489
|
+
#
|
490
|
+
# Open.mkdir File.basename(file)
|
491
|
+
# thr1 = Misc.consume_stream(sout, true, file)
|
492
|
+
# thr1.join
|
493
|
+
# assert Open.gzip?(file)
|
494
|
+
# assert_equal text, Open.read(file)
|
495
|
+
# end
|
496
|
+
# end
|
497
|
+
#
|
498
|
+
# def test_open_pipe_error
|
499
|
+
# sout = Misc.open_pipe do |sin|
|
500
|
+
# 10.times do |i|
|
501
|
+
# sin.puts "line #{i}"
|
502
|
+
# end
|
503
|
+
# raise
|
504
|
+
# end
|
505
|
+
#
|
506
|
+
# TmpFile.with_file do |tmp|
|
507
|
+
# #Misc.consume_stream(sout, false, tmp)
|
508
|
+
# assert_raise do
|
509
|
+
# Open.write(tmp, sout)
|
510
|
+
# end
|
511
|
+
# end
|
512
|
+
# end
|
513
|
+
#end
|
514
|
+
end
|
515
|
+
|