scaffolder-test-helpers 0.2.1 → 0.2.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/VERSION +1 -1
- data/lib/scaffolder/test/helpers.rb +4 -4
- data/scaffolder-test-helpers.gemspec +2 -2
- data/spec/scaffolder/test/helpers_spec.rb +12 -12
- metadata +4 -4
data/VERSION
CHANGED
@@ -1 +1 @@
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1
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-
0.2.
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1
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+
0.2.2
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@@ -12,15 +12,15 @@ module Scaffolder::Test
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[write_scaffold_file(entries),write_sequence_file(entries)]
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end
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-
def write_scaffold_file(entries,file = Tempfile.new("scaffold")
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File.open(file,'w') do |tmp|
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+
def write_scaffold_file(entries,file = Tempfile.new("scaffold"))
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File.open(file.path,'w') do |tmp|
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tmp.print(YAML.dump(entries.map{|e| e.to_hash }))
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end
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file
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end
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-
def write_sequence_file(entries,file = Tempfile.new("sequence")
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File.open(file,'w') do |tmp|
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def write_sequence_file(entries,file = Tempfile.new("sequence"))
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File.open(file.path,'w') do |tmp|
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entries.each do |entry|
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tmp.puts(entry.to_fasta) if entry.respond_to? :to_fasta
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end
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@@ -5,11 +5,11 @@
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Gem::Specification.new do |s|
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s.name = %q{scaffolder-test-helpers}
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s.version = "0.2.
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s.version = "0.2.2"
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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s.authors = ["Michael Barton"]
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s.date = %q{2011-04-
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+
s.date = %q{2011-04-05}
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s.description = %q{Useful Helper methods and classes for testing scaffolder.}
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s.email = %q{mail@michaelbarton.me.uk}
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s.extra_rdoc_files = [
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@@ -10,14 +10,14 @@ describe Scaffolder::Test::Helpers, "#generate_scaffold_files method" do
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end
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it "should create the corresponding scaffold file" do
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File.exists?(@scaf_file).should be_true
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scaffold = YAML.load(File.read(@scaf_file))
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File.exists?(@scaf_file.path).should be_true
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scaffold = YAML.load(File.read(@scaf_file.path))
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scaffold.should == [{'sequence' => {'source' => 'c1'}}]
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end
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it "should create the corresponding sequence file" do
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File.exists?(@seq_file).should be_true
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sequence = File.read(@seq_file)
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File.exists?(@seq_file.path).should be_true
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sequence = File.read(@seq_file.path)
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sequence.should == ">c1\nATG\n"
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end
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@@ -32,15 +32,15 @@ describe Scaffolder::Test::Helpers, "#generate_scaffold_files method" do
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end
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it "should create the corresponding scaffold file" do
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File.exists?(@scaf_file).should be_true
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scaffold = YAML.load(File.read(@scaf_file))
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File.exists?(@scaf_file.path).should be_true
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scaffold = YAML.load(File.read(@scaf_file.path))
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scaffold.should == [{'sequence' => {'source' => 'c1'}},
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{'sequence' => {'source' => 'c2'}}]
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end
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it "should create the corresponding sequence file" do
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File.exists?(@seq_file).should be_true
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sequence = File.read(@seq_file)
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File.exists?(@seq_file.path).should be_true
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sequence = File.read(@seq_file.path)
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sequence.should == ">c1\nATG\n>c2\nATG\n"
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end
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@@ -55,15 +55,15 @@ describe Scaffolder::Test::Helpers, "#generate_scaffold_files method" do
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end
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it "should create the corresponding scaffold file" do
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File.exists?(@scaf_file).should be_true
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scaffold = YAML.load(File.read(@scaf_file))
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File.exists?(@scaf_file.path).should be_true
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scaffold = YAML.load(File.read(@scaf_file.path))
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scaffold.should == [{'sequence' => {'source' => 'c1'}},
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{'unresolved' => {'length' => 5}}]
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end
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it "should create the corresponding sequence file" do
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File.exists?(@seq_file).should be_true
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sequence = File.read(@seq_file)
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File.exists?(@seq_file.path).should be_true
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sequence = File.read(@seq_file.path)
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sequence.should == ">c1\nATG\n"
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end
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metadata
CHANGED
@@ -1,13 +1,13 @@
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1
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--- !ruby/object:Gem::Specification
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name: scaffolder-test-helpers
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version: !ruby/object:Gem::Version
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hash:
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hash: 19
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prerelease: false
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segments:
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- 0
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- 2
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-
-
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version: 0.2.
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- 2
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version: 0.2.2
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platform: ruby
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authors:
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- Michael Barton
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@@ -15,7 +15,7 @@ autorequire:
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bindir: bin
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cert_chain: []
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date: 2011-04-
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date: 2011-04-05 00:00:00 -04:00
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default_executable:
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dependencies:
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- !ruby/object:Gem::Dependency
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